BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg326918
Length=2586
Score E
Sequences producing significant alignments: (Bits) Value
AT5G27010.1 | Symbols: | ARM repeat superfamily protein | chr5... 3291 0.0
AT5G06350.1 | Symbols: | ARM repeat superfamily protein | chr5... 2987 0.0
> AT5G27010.1 | Symbols: | ARM repeat superfamily protein | chr5:9503315-9507569
REVERSE LENGTH=2592
Length=2592
Score = 3291 bits (1782), Expect = 0.0
Identities = 2352/2621 (90%), Gaps = 64/2621 (2%)
Strand=Plus/Plus
Query 1 ATGGCTCGCTCCAAGGGTCTTGCAAAGAAGCAGCAAAAGAAAGGAATTGATTTCAAGAAA 60
||| |||||||||||| || ||||| ||||||||||||||||||||| ||||||||||||
Sbjct 1 ATGTCTCGCTCCAAGGCTCCTGCAAGGAAGCAGCAAAAGAAAGGAATCGATTTCAAGAAA 60
Query 61 ATCAAGAGAAAGCT-GGGAAGAAAATTACCTCCACCAAATAATGCAACTAACACCGAGAT 119
|||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 61 ATCAAGAGAAAGCTCGGG-AGAAAATTACCTCCACCAAATAATGCAACTAACACAGAGAT 119
Query 120 TAAATCCAAAGCAATTATACTTCATGAGCAAAGTGTGGCAGCAGAAAAAGATGGTTTAGC 179
||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||
Sbjct 120 TAAATCCAAAGCAATTATACTTCATGAGCAAAGTGTGGCAGCAGAAAGAGATGGCTTCGC 179
Query 180 TACAAGTAAAAAAGGCTTGACCTTGAAGGAACTTCAGCTA-CGAACTTCACATCACAATG 238
||||||||| ||||| ||||||||| || ||| || | |||||| |||| |||||
Sbjct 180 TACAAGTAAGAAAGGTTTGACCTTGCTTGAGCTTAAG-AACCGAACTGGGCATCCCAATG 238
Query 239 CTAAAGTTCTCAAAGATACATTACATGGTTTCCAAGACCTTTTTAAACATCATCCAGCAG 298
||||||||| ||||||| ||||||||||| || |||| ||||| ||||||||||| ||||
Sbjct 239 CTAAAGTTCGCAAAGATGCATTACATGGTATCAAAGATCTTTTAAAACATCATCCTGCAG 298
Query 299 AGCTGCAATCAAATAAATATACTGTCATACA-GT-GTCTTAGAAAACTCATTAGTCATGA 356
|||||| |||||||||||| || | |||| | |||||| ||||||||| | ||||
Sbjct 299 AGCTGCTGTCAAATAAATATGCT-AC-TACACATAAACTTAGAGAACTCATTACTGATGA 356
Query 357 TGATGGGTTAGTGAGAGAAGCTTTTTATGA-ACTATTTAGAACTCAGATCTTTCGTGCTT 415
|||| |||||| ||||| | ||||||| | |||| || | ||| |||||||| |||||
Sbjct 357 TGATAAGTTAGTAAGAGACGATTTTTAT-ACACTA-TT-G-ACTGGGATCTTTCTTGCTT 412
Query 416 GTAAAGAGG--A-TAACAAGGGCCTTATGGTGTCACTTTTGATGCCATACATATTTACCG 472
||||||||| | ||||||||| |||||||| ||| |||||||||||||||||||||||
Sbjct 413 GTAAAGAGGATATTAACAAGGGTCTTATGGTTTCAAGTTTGATGCCATACATATTTACCG 472
Query 473 CTATGACTAATTCATCTATTGATGTTCGTTTGATGGCTTTCAATTTTTTCCACCTTGTTT 532
|||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||||||
Sbjct 473 CTATGACTAAGTCATCTATTGAAGTTCGTTTGATGGCTTTCAAATTTTTCCGCCTTGTTT 532
Query 533 TGGAGTATTACCCGCCTACGTTTTCCTTATATGCTGAAAAGATTCTTGAAAACTACAAGG 592
|||||| |||| ||||||| || ||||||||||||||||||||||| |||||||||||||
Sbjct 533 TGGAGTTTTACTCGCCTACCTTCTCCTTATATGCTGAAAAGATTCTCGAAAACTACAAGG 592
Query 593 ATGTTATTCAGAAAAACCATTTTTATGTACAAGATAAAAACAAGC-TAGAGGTAGTTCTT 651
|||||||||| || |||||||||||| ||||||||||||| |||| || |||||||||||
Sbjct 593 ATGTTATTCATAATAACCATTTTTATATACAAGATAAAAAGAAGCTTA-AGGTAGTTCTT 651
Query 652 TCCGGGTTGGCACATTGCTTGTCGCTGTTGCCATGTGATGAGAGCAATACTGATTCACAG 711
| ||||||||| |||||||||||||||||||||||||| ||||| | | ||| ||| ||
Sbjct 652 TTGGGGTTGGCAGATTGCTTGTCGCTGTTGCCATGTGATCAGAGCGACAATGAATCAAAG 711
Query 712 ----A--GA-----A-AGAATGAAACGCTACTCGCCTATGAGGAAGATGCTGCGAAAGAA 759
| || | || |||||||||||||||||| |||| |||||||||||||||||
Sbjct 712 AAAAAGGGACTTTTACAGTATGAAACGCTACTCGCCTGTGAGCAAGATGCTGCGAAAGAA 771
Query 760 TGTGTTCGTTTTGCCCATGTCTCTGGGATATTGAAGGAGATTGTTGGAGTCTTAATCAAT 819
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct 772 TGTGTTCGTTTTGCCCATGTCTCTGGGATACTGAAGGAGATTGTTGCAGTCTTAATCAAT 831
Query 820 TGTTTCCAAGATTTCATTCCATTGATTCAAACTCCGCGAGGATTCAATAAACATTCATTT 879
||||||||||||||| ||||||| ||||| || ||| | || |||||||| | ||||||
Sbjct 832 TGTTTCCAAGATTTCCTTCCATTAATTCATGCTTCGCAAAGAATCAATAAAGAATCATTT 891
Query 880 GATTGCATACTCCATATACTTCGCAGCATAGGTTATGCAATCAAGTTTTCCATTCGTAGG 939
|||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 892 GATTGCATCCGCCATATACTTCGTAGCATAGGTTATGCAATCAAGTTTTCCATTCGTAGG 951
Query 940 CACTCTCAAAGACAGGCTACATGGCTACCTGCATCTGAAGAAAATACTCTTATGATATTG 999
||| |||||||||| ||| |||||||||| || |||||||||||||||| |||||| ||
Sbjct 952 CACACTCAAAGACACACTAAATGGCTACCTTCACCTGAAGAAAATACTCTGATGATACTG 1011
Query 1000 GATCCGT-ACATTGCATCATTGTTATCGAAAAAGTTACTTGGTTCTTTTCCCCTTAATTG 1058
||| ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 1012 GAT-CGTGACATTGCATCAATGTTATCGAAAAAGTTACTTGGTTCTTTTCCACTTAATCA 1070
Query 1059 CGAAAACAATCTTTCTGGAAAGAATGATGAACTCAACAGTGTTTTGACAGAAATATTTTT 1118
|||||||||| ||||| | | || ||| ||| |||| ||||||||||| |||||
Sbjct 1071 CGAAAACAATTTTTCT-----GTA-GA-GAA--CAATGGTGTATTGACAGAAATCTTTTT 1121
Query 1119 GGAAGTAAGTGAATGGAG-CAGCCTTCCTTCTAATCTTTCCAATAGATTTCTGGAATTTC 1177
|||||||||||||||||| || |||||||| | ||||||||||||||||||| ||||||
Sbjct 1122 GGAAGTAAGTGAATGGAGCCA-CCTTCCTTGTGATCTTTCCAATAGATTTCTAGAATTTA 1180
Query 1178 TTGAGAATGCCCTACAAGGCAAGATCACCAGGAGCAATAAG-CTTAG-TAAGAGTTTACT 1235
||||||||||| ||| ||| ||||||||||| |||||| || ||| | ||||| ||||||
Sbjct 1181 TTGAGAATGCCTTACTAGGAAAGATCACCAGAAGCAAT-AGTCTT-GATAAGACTTTACT 1238
Query 1236 TTCACTCTTGCCCTTTGTTCCGAAACTTATTTTGAGGGTGGACCATGATCAGAGAGATAA 1295
| ||||||||||||||||||| |||||| || |||||||||||| ||||| |||||||||
Sbjct 1239 TGCACTCTTGCCCTTTGTTCCAAAACTTCTTCTGAGGGTGGACCGTGATCGGAGAGATAA 1298
Query 1296 TCTTATGCAGGCATTTACTATTACCTTCAATGATTGCAAACCAGACTCTCCACTTAAATT 1355
|||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||
Sbjct 1299 TCTTATGCAGGCATTTACTATTACCTTCAACAATTGCAAACCAGAGTCTTCACTTAAATT 1358
Query 1356 AGCCTGCATTTCAGTCGTTAAAGATGTGATTATCCATAATGGAGATATCCTTTATCACAA 1415
||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||| |||
Sbjct 1359 AGCCTGCATTTCAGTTGTTAAAGATTTGATTATCCCTAATGGAGATATCCTTTATCCCAA 1418
Query 1416 TGATCCAACCGTAAATAACTATCAGCGCGCTTGGGTCAACAAACTTCCGTCACTGCTTAA 1475
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 1419 TGATCCAACCGTAAATAACTACCAGCGCGCTTGGGTCAACAAACTTCCATCACTGCTTAA 1478
Query 1476 CCAGTTGGGTGATAAGCATCCCGTATCTACCAAGGTTGTTTTGCAACTTTTGCTCGACCT 1535
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1479 CCAGTTGGGTGATAAGCATCATGTATCTACCAAGGTTGTTTTGCAACTTTTGCTCGACCT 1538
Query 1536 TGCGCGAGTTGGGTGTCTGAATGCTTCCCCAACATTTGAAGAAGAGATCAGCAA-CTTCT 1594
|||||||||||| |||||||||||||| |||||||||||||||||||| || || |||||
Sbjct 1539 TGCGCGAGTTGGATGTCTGAATGCTTCTCCAACATTTGAAGAAGAGATAAG-AAGCTTCT 1597
Query 1595 TCATCCCTTGTCAGGGAGAAGGTGATGAGCCTGGTGGAACTTTTGCAAGTCTCCCTAGGG 1654
||||||||| ||| ||||||||||| | ||| |||||| |||||| ||||||||||||||
Sbjct 1598 TCATCCCTTTTCATGGAGAAGGTGAGGTGCCAGGTGGACCTTTTGTAAGTCTCCCTAGGG 1657
Query 1655 AAGTCCAAGAAGTGGCTCTCTGTTTCCTTTACTACTTCACCGTAGACAATTTTAGCTCCC 1714
|||| |||||||||||||||||||||||||||||||||| | |||||||||| |||||||
Sbjct 1658 AAGTACAAGAAGTGGCTCTCTGTTTCCTTTACTACTTCATCATAGACAATTTCAGCTCCC 1717
Query 1715 GTATGCTGAAAGCAATAGTTTCATGTTGTTTATATCAACAACTTGAACCAGCTGTGTTGT 1774
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 1718 CTATGCTGAAAGCAATAGTTTCATGCTGTTTATATGAACAACTTGAACCAGCTGTGTTGT 1777
Query 1775 TTCGGATAGTGGAAATTCTTCACAGTGCTTATAAAGCTGGATATATCCAGATTACAGATC 1834
||||||||||||||||||||| | ||| |||| || ||||||||| |||||||||||||
Sbjct 1778 ATCGGATAGTGGAAATTCTTCAAACTGCCTATAGAGGTGGATATATTCAGATTACAGATC 1837
Query 1835 ATTTCAGCTTCTTCATCACCTTAATTGCACGTTTCAAAGTTGTCCCAGAGAAACTGGAGT 1894
|||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||| | |
Sbjct 1838 ATTTTAGCTTCTTCATTACCTTGATTTCACGTTTCAAAGTTGTCCCAGAGAAACTGAACT 1897
Query 1895 CAGCGATTGAGTGTGATGAGCAGG-AGACATATTGTGGCACATTTAAAGA-ACTTACAAA 1952
| |||||||||||||||||| ||| || || ||||||||||||||||| | |||||||||
Sbjct 1898 CGGCGATTGAGTGTGATGAG-AGGAAGGCAAATTGTGGCACATTTAAA-ACACTTACAAA 1955
Query 1953 CCTTGTGTGCTCATGTTTGTCAGAAATGGGTGATAGCTCTCTTGTCCTCCAGATTCTAGA 2012
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1956 CCTTGTGTGCTCATATTTGTCAGAAATGGGTGATAGCTCTCTTGTCCTCCAGATTCTAGA 2015
Query 2013 GAAAGTTTTTGTTGAACAAATAATTTCGAAGCCTGCGTTGGACAATGGGTGTGCCATACT 2072
|||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 2016 GAAAGTTTTTGTCGAACAAATAATTTTGAAGCCTGCGTTGGACAATGGGTGTGCTATACT 2075
Query 2073 CAGGATGATCTGCACGTTGGACTCTAAACCTACAAGACTTTCTGAAAGCAGTGTAACCA- 2131
||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 2076 CAGGATGATCTGCGCGTTAGACTCTAAACCTACAAGACTTTCTGAAATCAGTGTAACCAC 2135
Query 2132 T--AAGTGAATTCTTACCGGGATATTTGATCGATATAGTCAAATGTAAACCAGAAGATAA 2189
| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 2136 TCTAAGTGAATTCTTACCGGGATATTTGATCGATATAGTCAATTGTATACCAGAAGATAA 2195
Query 2190 GGAGA-ACTCTTACCTTTACATACAAACATGTCTCTACTATTTAGTACCTTGCTACTTCC 2248
|||| | ||||||||||| || ||||||||||| ||||||||| |||||||||||||||
Sbjct 2196 AGAGAGA-TCTTACCTTTATATGCAAACATGTCTGTACTATTTATTACCTTGCTACTTCC 2254
Query 2249 TGTTCGACCGAAGCTCCAAACTCACAGAACAGGTTCTGAAAAGATTGAGCT-TGATGGTT 2307
|||||||||| ||||||||||||||||||||||||||||||||| || | | | ||||||
Sbjct 2255 TGTTCGACCGGAGCTCCAAACTCACAGAACAGGTTCTGAAAAGAATGCGATCT-ATGGTT 2313
Query 2308 AGTGAAAACACTAAA-GCGCTGGAATCGGTCCAAGACAGGGAGAGCGGTCAAGACTCATT 2366
|||||||| |||| || |||||||||| |||||||||||||| |||| |||||||||
Sbjct 2314 AGTGAAAATG-TAAAAGCATTGGAATCGGTTCAAGACAGGGAGAGTGGTCGAGACTCATT 2372
Query 2367 GAATTTGATACAATGCATTATCTCTGTGATCCTGCTGATGCACAACGACGTCAAAGTTAG 2426
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 2373 GAATTTGATACAATGCATTGTCTCTGTGATCCTGCTGATGCACAACGATGTCAAAGTTAG 2432
Query 2427 GAAGATAATATCATCATTCAAGTCAGAGATCGATTTGATTCTGCAGAACGTT-ATCACGT 2485
||||||||||||||||| |||||||||||| ||||||||||||||||||||| | ||| |
Sbjct 2433 GAAGATAATATCATCATCCAAGTCAGAGATTGATTTGATTCTGCAGAACGTTTA-CACAT 2491
Query 2486 TGCAGGCCTCACGAAGCACGAGCTTGATTGTAGAAGGAAAACATATGATGAAAATCGCAG 2545
||||| ||||||||||||||||||||| |||||||||||| |||||||||||||| ||||
Sbjct 2492 TGCAGTCCTCACGAAGCACGAGCTTGACTGTAGAAGGAAAGCATATGATGAAAATTGCAG 2551
Query 2546 GAGAGCGACTTAGGATTGCATCCAAAAGCTTACTCGCATAA 2586
|||||||||||| ||||||||||| |||||||||||||||
Sbjct 2552 CAGAGCGACTTAGCATTGCATCCAATAGCTTACTCGCATAA 2592
> AT5G06350.1 | Symbols: | ARM repeat superfamily protein | chr5:1938781-1944357
FORWARD LENGTH=2794
Length=2794
Score = 2987 bits (1617), Expect = 0.0
Identities = 2319/2650 (88%), Gaps = 80/2650 (3%)
Strand=Plus/Plus
Query 1 ATGGCTCGCTCCAAGGGTCTTGCAAAGAAGCAGCAAAAGAAAGGAATTGATTTCAAGAAA 60
|||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGTTCGCTCCAAGGCTCCTGCAAAGAAGCAGCAAAAGAAAGGAATTGATTTCAAGAAA 60
Query 61 ATCAAGAGAAAGCT-GGGAAGAAAATTACCTCCACCAAATAATGCAACTAACACCGAGAT 119
|| ||||||||||| ||| ||||||||||| |||||||| |||||||| ||||| |||||
Sbjct 61 ATTAAGAGAAAGCTCGGG-AGAAAATTACCACCACCAAAGAATGCAACCAACACTGAGAT 119
Query 120 TAAATCCAAAGCAATTATACTTCATGAGCAAAGTGTGGCAGCAGAAAAAGA-TGGTTTAG 178
||||||||||||||||||||||| ||||||||||||||| || | |||||| ||| ||||
Sbjct 120 TAAATCCAAAGCAATTATACTTCCTGAGCAAAGTGTGGCTGCTG-AAAAGAGTGGCTTAG 178
Query 179 CTACAAGTAAAAAAGGCTTGACCTTGAAGGAACTTCAGCTACGA-ACTTCACATCACAAT 237
|||||||||| ||||||||||| ||||||||||||| || || | ||||| |||||||||
Sbjct 179 CTACAAGTAAGAAAGGCTTGACTTTGAAGGAACTTCTGCCAC-AGACTTCTCATCACAAT 237
Query 238 GCTAAAGTTCTCAAAGATACATTACATGGTTTCCAAGACCTTTTTAA-ACATCATCCAGC 296
|| ||||||| ||||||| |||| ||||| || |||||||||| || | |||||||||
Sbjct 238 GCCAAAGTTCGCAAAGATGCATTGTATGGTATCAAAGACCTTTTCAAGA-ATCATCCAGA 296
Query 297 AGAGCTGCAATCAAATAAATATACTGTCATACAGTGTCTTAGAAAACTCATTAGTCATGA 356
|||||| || ||| |||||||| || |||||||| || || ||| ||||||| ||||
Sbjct 297 AGAGCTACAGTCACATAAATATGCTATCATACAGAAACTCAGGGAACGCATTAGTGATGA 356
Query 357 TGATGGGTTAGTGAGAGAAGCTTTTTATGAACTATTTAGA-ACTCAGATCTTTCGTGC-T 414
|||| | |||||||||| | ||||||| |||||||| || | | | ||||||| | | |
Sbjct 357 TGATAAGCTAGTGAGAGATGTTTTTTATCAACTATTT-GATATTGACATCTTTCCT-CTT 414
Query 415 TGTAAAGAGGATAACAAGGGCCTTATGGTGTCACTTTTGATGCCATACATATTTACCGCT 474
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 415 TGTAAAGAGGATAACCAGGGCCTTATGGTGTCACTTTTGATGCCATACATATTTAGCGCT 474
Query 475 ATGACTAATTCATCTATTGATGTTCGTTTGATGGCTTTCAATTTTTTCCACCTTGTTTTG 534
||| || ||||| |||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 475 ATGGCTCATTCAGCTATTGATGTTCGTTTGATGGCTTTCAAATTTTTCCACCTTGTTGTG 534
Query 535 GAGTAT-TACCCGCCTACGTTTTCCTTATATGCTGAAAAGATTCTTGAAAACTACAAGGA 593
|||| | ||||||||||| |||||||| |||||||||||||||| ||||||||||||||
Sbjct 535 GAGT-TCTACCCGCCTACCTTTTCCTTGGATGCTGAAAAGATTCTCGAAAACTACAAGGA 593
Query 594 TGTTATTCAGAAAAACCATTTTTATGTACAAGATAAAAACAAGCTAGAGGTAGTTCTTTC 653
| |||| |||||||| ||||||||||| ||||||||| ||||||| |||| | ||||||
Sbjct 594 TATTATACAGAAAAATCATTTTTATGTGGAAGATAAAAGCAAGCTAAAGGTGGCTCTTTC 653
Query 654 CGGGTTGGCACATTGCTTGTCGCTGTTGCCATGTGATGAGAGCAATACTGATTCAC---- 709
|||||| |||||||| | ||| | |||||||||||||||||| | || | ||||
Sbjct 654 TGGGTTGTCACATTGCCTCTCGGTTTTGCCATGTGATGAGAGCGACACCAAATCACAAAA 713
Query 710 --AGAGA-----A-AGAATGAAACGCTACTCGCCTATGAGGAAGATGCTGCGAAAGAATG 761
|| || | |||||||||| |||||| |||||||| |||||||| | ||||| ||
Sbjct 714 AAAGGGACCTTCACAGAATGAAACACTACTCACCTATGAGCAAGATGCTACAAAAGATTG 773
Query 762 TGTTCGTTTTGCCCATGTCTCTGGGATATTGAAGGAGATTGTTGGAGTCTTAATCAATTG 821
|||||||| ||||||||||| | || |||||||||| |||||| |||||||||||||||
Sbjct 774 TGTTCGTTATGCCCATGTCTATCAGAGATTGAAGGAGGTTGTTGCAGTCTTAATCAATTG 833
Query 822 TTTCCAAGATTTCATTCCATTGATTCAAACTCCGCGAGGATTCAATAAACATTCATTTGA 881
||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||
Sbjct 834 TTTCCAAGATTTCATTCCATTGATTCATGCTCCGCGAGGATTCGATGCACATTCATTTGA 893
Query 882 TTGCATACTCCATATACTTCGCAGCATAGGTTATGCAATCAAGTTTTCCATTCGTAGGCA 941
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 894 TTGCATACAACATATACTTCGCAGCATAGGTTATGCAATCAAGTTTTCCATTCGTAGGCA 953
Query 942 CTCTCAAAGACAGGCTACATGGCTACCTGCATCTGAAGAAAATACTCTTATGATATTGGA 1001
| ||||||||| || |||||| |||||||||||||||| |||||| |||||||||||
Sbjct 954 CAAGCAAAGACAGACTGCATGGCGACCTGCATCTGAAGAAGTTACTCTGATGATATTGGA 1013
Query 1002 TCCGTACATTGCATC-ATTGTTATCGAAAAAGTTACTTGGTTCTTTTCCCCTTAATTGC- 1059
|| | |||||||||| | || | | ||||||||||||||||| |||||||| | | |
Sbjct 1014 TCAGGACATTGCATCGA-TGCTGTTAAAAAAGTTACTTGGTTCATTTCCCCTCGA-TCCA 1071
Query 1060 GAAAACAATCTTTCTGGAAA----GA--AT--G-A---TGAACTCAACAGTGTTTTGACA 1107
||||||||||||| |||||| || || | | | ||||||||||||| ||||||
Sbjct 1072 GAAAACAATCTTTATGGAAAGGGTGATGATAAGTACTTTAAACTCAACAGTGTATTGACA 1131
Query 1108 GAAATATTTTTGGAAGTAAGTGAATGGAG-CAGCCTTCCTTCTAATCTTTCCAATAGATT 1166
||||| ||||||||||||||||||||||| || ||||||| || |||||||||||||||
Sbjct 1132 GAAATCTTTTTGGAAGTAAGTGAATGGAGCCA-CCTTCCTACTGATCTTTCCAATAGATA 1190
Query 1167 TCTGGAATTTCTTGAGAATGCCCTACAAGGCAAGATCACCAGGAGCAATAAGC-T--T-- 1221
|||||||||| |||||||| | |||| |||||||||||||||||||| || || | |
Sbjct 1191 TCTGGAATTTATTGAGAATACACTACTAGGCAAGATCACCAGGAGCATTAGGCTTCGTAA 1250
Query 1222 AG-TA---A-G---AG--TTTACTTTCACTCTTGCCCTTTGTTCCGAAACTTATTTTGAG 1271
|| || | | || ||||||| |||||||||||||| |||| ||||||||| ||||
Sbjct 1251 AGATATTCACGAAAAGACTTTACTTGCACTCTTGCCCTTTCTTCCAAAACTTATTCTGAG 1310
Query 1272 GGTGGACCATGATCAGAGAGATAATCTTATGCAGGCATTTACTATTACCTTCAATGATTG 1331
||| |||| |||| ||||||||||||| || ||||||||||||||||||||| |||||
Sbjct 1311 GGTAGACCGTGATTGGAGAGATAATCTTCTGGAGGCATTTACTATTACCTTCAGCGATTG 1370
Query 1332 CAAACCAGACTCTCCACTTAAATTAGCCTGCATTTC-AGTCGTTAAAGATGTGATTATCC 1390
||||||||| ||| ||| ||||||||||||||||| | | |||| ||| |||||||||
Sbjct 1371 CAAACCAGAGTCTAAACTCAAATTAGCCTGCATTTCAACT-GTTAGAGACATGATTATCC 1429
Query 1391 ATAATGGAGATATCCTTTAT--C-A--CAA-TGATCCAACCGTAAATAACTATCAGCG-C 1443
||||||||||||||||||| | | ||| ||||||||| ||| || |||| ||| |
Sbjct 1430 CTAATGGAGATATCCTTTATCCCAATGCAAGTGATCCAACGGTACATTACTACCAG-GTT 1488
Query 1444 GCTTGGGTCAACAAACTTCCGTCACTGCTTAACCAGTTGGGTGATAAGCATCCCGTATCT 1503
|||||||||||||||||||| || |||||||| ||||||||| || ||||||||||||||
Sbjct 1489 GCTTGGGTCAACAAACTTCCATCGCTGCTTAATCAGTTGGGTAATGAGCATCCCGTATCT 1548
Query 1504 AC-CAAGGTTGTTTTGCAACTTTTGCTCGACCTTGCGCGAGTTGGGTGTCTGAATGCTTC 1562
|| | ||||||| |||||||| || |||||||||| ||||||||||||||||||||||||
Sbjct 1549 ACTC-AGGTTGTGTTGCAACTCTTACTCGACCTTGGGCGAGTTGGGTGTCTGAATGCTTC 1607
Query 1563 CCCAACATTTGAAGAAGAGATCAGCAACTTCTTCATCCCTTGTCAGGGAGAAGGTGATG- 1621
||| || | |||||| || ||||| |||||||||| || ||||||||||||||||||||
Sbjct 1608 CCCCACCTGTGAAGATGACATCAGAAACTTCTTCAGCCTTTGTCAGGGAGAAGGTGATGT 1667
Query 1622 AGCCTGGTGGAACTTTTGCAAGTCTCCCTAGGGAAGTCCAAGAAGTGGCTCTCTGTTTCC 1681
| ||||||||| ||||||||||||||||| |||||| ||||||| |||||||||||||||
Sbjct 1668 A-CCTGGTGGACCTTTTGCAAGTCTCCCTCGGGAAGCCCAAGAACTGGCTCTCTGTTTCC 1726
Query 1682 TTTACTACTTCACCGTAGACAATTTTAGCTCCCGTATGCTGAAAGCAATAGTTTCATGTT 1741
|||||||||||||| |||||| || ||||||| |||| ||||||||||||||||||| |
Sbjct 1727 TTTACTACTTCACCACAGACAAATTCAGCTCCCCTATGATGAAAGCAATAGTTTCATGCT 1786
Query 1742 GTTTATATCAACAACTTGAACCAGCTGTGTTGTTTCGGATAGTGGAAATTCTTCACAGTG 1801
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1787 GTTTATATCCACAACTTGAACCAGCTGTGTTGTATCGGATAGTGGAAATTCTTCACACTG 1846
Query 1802 CTTATAAAGCTGGATATATCCAGATTACAGATCATTTCAGCTT-CTTCATCACCTTAATT 1860
| |||| |||||||||||||||||||||||||||||| ||||| ||| ||||||||||||
Sbjct 1847 CCTATAGAGCTGGATATATCCAGATTACAGATCATTTTAGCTTCCTT-ATCACCTTAATT 1905
Query 1861 GCACGTTTCAAAGTTGTCCCAGAGAAACTGGAGTCAGCGATTGAGTGTGATGAGCAGGAG 1920
|||||||||||||||||||||||||||||| ||||| |||| |||||| |||| | ||||
Sbjct 1906 GCACGTTTCAAAGTTGTCCCAGAGAAACTGCAGTCATCGATAGAGTGTAATGAACGGGAG 1965
Query 1921 ACATATTGTGGCACATTTAAAGAACTTACAAACCTTGTGTGCTCATGTTTGTCAGAAATG 1980
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct 1966 ACATATTGTGGCACATTTAAAGAAGTTACAAAGCTTGTGTGCTCATGTTTGTCAGAAATG 2025
Query 1981 GGTGATAGCTCTCTTGTCCTCCAGATTCTAGAGAAAGTTTTTGTTGAACAAATAATTTCG 2040
|||||||| ||||||||||| |||||| ||||||||||||| | ||||||||| ||| |
Sbjct 2026 GGTGATAGTTCTCTTGTCCTTCAGATTGTAGAGAAAGTTTTACTCGAACAAATAGTTTTG 2085
Query 2041 AAGCCTGCGTTGGACAATGGGTGTGCCATACTCAGGATGATCTGCACGTTGGACTCTAAA 2100
|||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 2086 AAGCCTGCGTTGGATAATGGGTGTGCCATACTCAGGATGATCTGCGTGTTGGACTCTACC 2145
Query 2101 CCTACAAGACTTTCTGAAAGCAGTGTAACCA---TAAGTGAATTCTTACCGGGATATTTG 2157
||||| | |||||||||||| |||||||||| ||||||| ||||||||||||||| ||
Sbjct 2146 CCTACCACACTTTCTGAAAGGAGTGTAACCACTCTAAGTGAGTTCTTACCGGGATATATG 2205
Query 2158 ATCGATATAGTCAAATGTAAACCAGAAGATAAGGAGAACTCTTACCTTTACATACAAACA 2217
||| | |||||||| |||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 2206 ATCAACATAGTCAATTGTATACCAGAGGATAAGGAGAACTCTTACCTTTACATACAAACA 2265
Query 2218 TGTCTCTACTATTTAGTACCTTGCTACTTCCTGTTCGACCGAAGCTCCAAACTCACAGAA 2277
|||||||||||||||||||||||||| ||| ||||| | || ||||||||||||||||||
Sbjct 2266 TGTCTCTACTATTTAGTACCTTGCTATTTCTTGTTCAATCGGAGCTCCAAACTCACAGAA 2325
Query 2278 CAGGTTCTGAAAAGATTGAGCTTGATGGTTAGTGAAAACACTAAAGCGCTGGAATCGGTC 2337
|||||||||| |||| || | | ||| ||||||||||||| |||||||| ||||||||
Sbjct 2326 CAGGTTCTGATAAGAATGCGATCAATGATTAGTGAAAACACAAAAGCGCTAGAATCGGTA 2385
Query 2338 CAAGACAGGGAGAGCGGTC-AAGACTCATTGAATTTGATACAATGCATTATCTCTGTGAT 2396
||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct 2386 CAAGACAGGGAGAGCGGTCGAA-ACTCATTGAATATGATACAATGCATTATCTCTGTGAT 2444
Query 2397 CCTGCTGATGCACAACGACGTCAAAGTTAGGAAGATAATATCATCATTCAAGTCAGAGAT 2456
|||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||
Sbjct 2445 CCTGCTGATGCACAACGACGTCAAAGTTAGGAAGATAATATCGTCATTCAAGCCCGAGAT 2504
Query 2457 CGATTTGATTCTGCAGAACGTTATCACGTTGCAGGCCTCACGAAGCACGAGCTTGATTGT 2516
|||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 2505 CGATTTGATTCTTCAGAACGTTATCACGTTGCAGTCCTCACGAAGCACGAGCTTGACTGT 2564
Query 2517 AGAAGGAAAACATATGATGAAAATCGCAGGAGAGCGACTTAGGATTGCATCCAAAAGCTT 2576
||||||||| |||||||||||||| || |||||||||||||||||||| |||||||||||
Sbjct 2565 AGAAGGAAAGCATATGATGAAAATTGCGGGAGAGCGACTTAGGATTGCGTCCAAAAGCTT 2624
Query 2577 ACTCGCATAA 2586
|||||| |||
Sbjct 2625 ACTCGCGTAA 2634
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 128377207137
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5