BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg326953 Length=237 Score E Sequences producing significant alignments: (Bits) Value AT5G27495.1 | Symbols: | Defensin-like (DEFL) family protein |... 250 4e-66 AT2G12465.1 | Symbols: LCR50 | low-molecular-weight cysteine-ri... 104 4e-22 AT1G58055.1 | Symbols: | Defensin-like (DEFL) family protein |... 80.5 6e-15 > AT5G27495.1 | Symbols: | Defensin-like (DEFL) family protein | chr5:9706374-9706720 FORWARD LENGTH=246 Length=246 Score = 250 bits (135), Expect = 4e-66 Identities = 212/247 (86%), Gaps = 14/247 (6%) Strand=Plus/Plus Query 1 ATGACTACTAGCAAGAAAATGTTGATCGTATTTGTCCTTACTATCCTCTTTGTCATATCT 60 ||||||| ||||||||||||||| ||||| |||||||| |||||| || ||| ||||| Sbjct 4 ATGACTATTAGCAAGAAAATGTTAATCGTGTTTGTCCTGACTATCTTCGTTG---TATCT 60 Query 61 TCTGTTCATTGCTCTGATAGCACTCTTGGTCTT-GGA--ATA-AAG-AAG-----AAACA 110 | || ||||||||||||||| || |||| || ||| | | ||| ||| ||||| Sbjct 61 TTTGGTCATTGCTCTGATAGTTTTCCTGGT-TTAGGATTAAAGAAGCAAGCACATAAACA 119 Query 111 ATGCTACAGTCCAGATCTGTGTAAGGGAGGGGACGGCGAATGTGATATATGTTGTGTTCT 170 ||||||||||||||| ||||||| |||||| ||| || |||||||||||||||||||||| Sbjct 120 ATGCTACAGTCCAGACCTGTGTACGGGAGGAGACAGCAAATGTGATATATGTTGTGTTCT 179 Query 171 TACAAGTGGTGTATACTACGGTAAATGTATTCAAAGCAAATGTCATTGTTTGATTAAGAC 230 || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 180 TATAAGTGGTGTATACTACGGTAAATGTATTCAAAGCAAATGTCATTGTTTGAATAAGAC 239 Query 231 TGAATAA 237 | ||||| Sbjct 240 TAAATAA 246 > AT2G12465.1 | Symbols: LCR50 | low-molecular-weight cysteine-rich 50 | chr2:5055525-5055872 REVERSE LENGTH=252 Length=252 Score = 104 bits (56), Expect = 4e-22 Identities = 144/184 (78%), Gaps = 15/184 (8%) Strand=Plus/Plus Query 30 ATTTGTCCTTACTATCCTCTTTGTCATATCTTCTGTTCATTGCTCTGAT-AGCACTCTTG 88 |||||| || |||||||||||||||||||||||||||||||| |||||| | || | | Sbjct 30 ATTTGTTCTCACTATCCTCTTTGTCATATCTTCTGTTCATTGTTCTGATGAT-ACCCAAG 88 Query 89 GTCTTGGAATAAAG-AAGA--A-A--CAATGCTACAGTCCAGATC--TGT-GTAAGGGAG 139 || ||||||||||| |||| | | ||||| || | ||||||| ||| ||||||||| Sbjct 89 GTTTTGGAATAAAGCAAGAGTATAAACAATGTTATACACCAGATCCATGTCGTAAGGGAG 148 Query 140 GGGACGGCGAATGTGATATATGTTGTGTT-CTTACAAGTGGTGTA-TACTACGGTAAATG 197 | | | |||||| || | | |||||| || | ||| ||| || || ||||||||||| Sbjct 149 GTAATGACGAATGCGAGAGGTTTTGTGTAGCTAA-AAGCGGTTTACTA-TACGGTAAATG 206 Query 198 TATT 201 |||| Sbjct 207 TATT 210 > AT1G58055.1 | Symbols: | Defensin-like (DEFL) family protein | chr1:21488741-21489132 FORWARD LENGTH=308 Length=308 Score = 80.5 bits (43), Expect = 6e-15 Identities = 83/102 (81%), Gaps = 4/102 (4%) Strand=Plus/Plus Query 1 ATGACTACTAGCAAGAAAATGTTGA-TCGTATTTGTCCTTACTATCCTCTTTGTCATATC 59 |||||||| | ||||| |||||| | | | |||||| || ||| | ||||||||||||| Sbjct 1 ATGACTACCACCAAGACAATGTT-AGTTGCATTTGTTCTCACTTTGTTCTTTGTCATATC 59 Query 60 TTCTGTTCATTGCTCTGATAGCACTCTTGGTCT-TGGAATAA 100 ||||||||||||||| ||| ||||| |||| | ||| |||| Sbjct 60 TTCTGTTCATTGCTCCGATGGCACTAGTGGT-TATGGCATAA 100 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 10707030537 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5