BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg326968
Length=1425
Score E
Sequences producing significant alignments: (Bits) Value
AT5G27350.1 | Symbols: SFP1 | Major facilitator superfamily pro... 2283 0.0
AT5G27360.1 | Symbols: SFP2 | Major facilitator superfamily pro... 1692 0.0
> AT5G27350.1 | Symbols: SFP1 | Major facilitator superfamily protein
| chr5:9648667-9654426 FORWARD LENGTH=1966
Length=1966
Score = 2283 bits (1236), Expect = 0.0
Identities = 1363/1426 (96%), Gaps = 2/1426 (0%)
Strand=Plus/Plus
Query 1 ATGGTGGTGGAAGAAGAAAGAAGCATAGAAGAAGGGCTTTTGCAGCTCAAGAACCAAAAC 60
|||||| |||| |||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 292 ATGGTGATGGAGGAAGGAAGAAGCATAGAAGAAGGGCTTTTGCAGCTCAAGAACAAAAAC 351
Query 61 GACGATTCAGAGTGTCGTATTACTGCTTGTGTTATCTTTAGCACTTTTGTCGCCGTTTGT 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 352 GACGATTCAGAGTGTCGTATTACTGCTTGTGTTATCCTTAGCACTTTTGTCGCCGTTTGT 411
Query 121 GGCTCCTTCTCTTTTGGTGTTGCTACTGGTTATACTTCAGGTGCTGAGACAGGAGTTGTG 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 412 GGCTCCTTCTCTTTTGGTGTTGCTACTGGTTACACTTCAGGTGCTGAGACAGGAGTTATG 471
Query 181 AAGGACTTAGATCTTTCTATCGCGCAATTTTCAGCGTTTGGCTCATTCGCCACTTTAGGA 240
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 472 AAGGACTTGGATCTTTCTATCGCGCAATTTTCAGCTTTTGGCTCATTCGCCACTTTAGGA 531
Query 241 GCTGCAATTGGTGCACTGTTCAGCGGTAAAATGGCCATGGTCATTGGCAGAAGAGGGACA 300
||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||
Sbjct 532 GCTGCAATTGGTGCACTGTTCTGCGGTAATCTGGCAATGGTCATTGGCAGAAGAGGGACA 591
Query 301 ATGTGGGTCTCCGATATCCTATGCATCACTGGTTGGCTCTCCATCGCTTTCGCTAAGGAA 360
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 592 ATGTGGGTCTCCGATTTCCTATGCATCACTGGTTGGCTCTCCATCGCTTTTGCTAAGGAA 651
Query 361 GTGGTGTTGCTAAACTTCGGAAGAATTACTTCAGGGATAGGTTTCGGCTTGACGAGCTAT 420
|| |||||||| |||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 652 GTAGTGTTGCTGAACTTCGGAAGAATCATTTCAGGGATAGGTTTCGGCTTGACGAGCTAT 711
Query 421 GTGGTACCTGTCTATATAGCAGAAATTACGCCAAAACATGTTCGTGGTACATTTACGTTT 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 712 GTGGTACCTGTCTACATAGCAGAAATTACGCCAAAACATGTTCGTGGTACATTTACGTTT 771
Query 481 TCAAACCAGCTTCTCCAAAACGCTGGACTCGCCATGATTTATTTTTGTGGGAATTTCATC 540
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 772 TCAAACCAGCTTCTTCAAAACGCTGGACTCGCCATGATTTATTTCTGTGGGAATTTCATC 831
Query 541 AATTGGAGGACGTTGGCTTTATTAGGTGCTTTACCATGCTTCATTCAAGTAATCGGTTTA 600
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 832 ACTTGGAGGACGTTGGCTTTATTAGGTGCTTTACCATGCTTCATTCAAGTAATCGGTTTA 891
Query 601 TTCTTCGTACCAGAGTCTCCAAGATGGCTGGCAAAAGTTGG-TACAGATAAAGAACTAGA 659
|||||||| ||||||||||||||||||||||| |||||||| | | ||||||||||||||
Sbjct 892 TTCTTCGTGCCAGAGTCTCCAAGATGGCTGGCCAAAGTTGGCT-CCGATAAAGAACTAGA 950
Query 660 AAATTCACTGCTTCGGCTTAGAGGGAGAGATGCTGATATGTCACGTGAAGCCTCGGAAAT 719
|||||||||| ||||||||||||| |||||||||||||| |||||||||||||| |||||
Sbjct 951 AAATTCACTGTTTCGGCTTAGAGGAAGAGATGCTGATATTTCACGTGAAGCCTCAGAAAT 1010
Query 720 TCAAGTTATGACCAAACTGGTAGAAAATGATTCAAAGTCGAGTATTTCTGATTTGTTTCA 779
|||||| ||||||||| |||| ||||||||||||||||||||| |||| |||||||| ||
Sbjct 1011 TCAAGTAATGACCAAAATGGTGGAAAATGATTCAAAGTCGAGTTTTTCAGATTTGTTCCA 1070
Query 780 GAGAAAGTATAGATACACCCTCGTGGTAGGAATCGGGCTAATGTTGATACAACAATTCTC 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1071 GAGAAAGTATAGATACACCCTCGTGGTAGGAATCGGGCTAATGTTGATACAACAATTCTC 1130
Query 840 AGGAAGTGCTGCTGTAATCTCTTATGCAAGTACCATTTTTAGAAAAGCTGGTTTTCCAGT 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 1131 AGGAAGTGCTGCTGTAATCTCTTATGCAAGTACCATTTTTAGAAAAGCTGGTTTTTCGGT 1190
Query 900 GGCCATTGGAACGACGATGCTAGGTATCTTCGTGATTCCAAAAGCCATGATTGGTCTCAT 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1191 GGCCATTGGAACGACGATGCTAGGTATCTTCGTGATTCCAAAAGCCATGATTGGCCTCAT 1250
Query 960 TCTTGTCGATAAATGGGGCAGACGACCTCTGTTGTTGACTTCTGCGTTTGGGATGAGCAT 1019
|||||||||||||||||||||||| ||||| || ||||||| |||||||||||||||||
Sbjct 1251 TCTTGTCGATAAATGGGGCAGACGTCCTCTCCTGATGACTTCAGCGTTTGGGATGAGCAT 1310
Query 1020 GACTTGCATGCTTCTTGGGGTCGCCTTCACATTACAGAAAATGCAATTGCTTTCGGAAGT 1079
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1311 GACTTGCATGCTACTTGGGGTCGCCTTCACATTACAGAAAATGCAATTGCTTTCGGAACT 1370
Query 1080 AACTCCAGTATTATCGTTTATATGCGTTATGCTGTATATTGCAACTTATGCAATAGGCTT 1139
||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1371 AACTCCAATATTATCGTTTATATGCGTAATGATGTATATTGCAACTTATGCAATAGGCTT 1430
Query 1140 GGGAGGCCTCCCTTGGGTAATTATGTCGGAGATATTTCCAATAAATATAAAAGTAACCGC 1199
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1431 GGGAGGTCTACCTTGGGTAATTATGTCGGAGATATTTCCAATAAATATAAAAGTAACTGC 1490
Query 1200 AGGAAGTATAGTTACGTTAGTCTCATTTTCAAGTAGTTCAATCGTCACTTACGCTTTCAA 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1491 AGGAAGTATAGTTACGTTAGTCTCATTTTCAAGTAGTTCAATCGTCACTTACGCTTTCAA 1550
Query 1260 CTTTCTGTTCGAGTGGAGCACTCAAGGAACATTTTTTATATTCGGGGGTATCGGCGGAGC 1319
|||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct 1551 CTTTCTGTTCGAATGGAGCACTCAAGGAACGTTTTTCATATTCGCGGGTATCGGTGGAGC 1610
Query 1320 AGCGTTGCTTTTTATATGGTTGCTCGTTCCAGAAACGAAAGGATTGTCACTTGAAGAAAT 1379
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1611 AGCGTTGCTTTTTATATGGTTGCTCGTTCCAGAAACGAAAGGATTATCACTCGAAGAAAT 1670
Query 1380 ACAAGTTTCACTTATTCATCAGCCCGACGAAAGAAATCAAACATAA 1425
||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1671 ACAAGTTTCACTTATTCATCAGCCCGATGAAAGAAATCAAACTTAA 1716
> AT5G27360.1 | Symbols: SFP2 | Major facilitator superfamily protein
| chr5:9657026-9662559 FORWARD LENGTH=1664
Length=1664
Score = 1692 bits (916), Expect = 0.0
Identities = 1265/1433 (88%), Gaps = 26/1433 (2%)
Strand=Plus/Plus
Query 1 ATGGTGGTGGAAG-AAGAAAGAAGCATAGAAGAAGGGCTTTTGCAGCTCAAGAACCAAAA 59
|||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 106 ATGGTGGTGG-AGAAAGAAAGAAGCATAGAAGAAAGGCTTTTGCAGCTCAAGAACCAAAA 164
Query 60 CGACGATTCAGAGTGTCGTATTACTGCTTGTGTTATCTTTAGCACTTTTGTCGCCGTTTG 119
|||||||||||| |||||||||||||||||||||||| |||| ||||| |||| || ||
Sbjct 165 CGACGATTCAGAATGTCGTATTACTGCTTGTGTTATCCTTAGTACTTTCATCGCTGTGTG 224
Query 120 TGGCTCCTTCTCTTTTGGTGT-TGCTAC-TGGTTATACTTCAGGTGCTGAGACAGGAGTT 177
||| || ||||| |||||||| | || | |||||||||||||||||| |||| |||| ||
Sbjct 225 TGGTTCTTTCTCCTTTGGTGTCT-CT-CTTGGTTATACTTCAGGTGCAGAGATAGGAATT 282
Query 178 GTGAAGGACTTAGATCTTTCTATCGCGCAATTTTCAGCGTTTGGC-TCATTCGCCACTTT 236
|||||||||| |||||||||||||||||||||||||| ||| || ||||| |||||||
Sbjct 283 ATGAAGGACTTGGATCTTTCTATCGCGCAATTTTCAGCATTT-GCTTCATTATCCACTTT 341
Query 237 AGGAGCTGCAATTGGTGCACTGTTCAGCGGTAAAATGGCCATGGTCATTGGCAGAAGAGG 296
|||||||||||||| || |||| |||||||||||||| || || |||||||||||
Sbjct 342 GGGAGCTGCAATTGGAGCTTTGTTTAGCGGTAAAATGGCGATCATCCTTGGCAGAAGAAA 401
Query 297 GACAATGTGGGTCTCCGATATCCTATGCATCACTGGTTGGCTCTCCATCGCTTTCGCTAA 356
||||||||||| |||||| |||| || |||| ||||||| |||||||||||||||||||
Sbjct 402 AACAATGTGGGTGTCCGATCTCCTCTGTATCATTGGTTGGTTCTCCATCGCTTTCGCTAA 461
Query 357 GGAAGTGGTGTTGCTAAACTTCGGAAGAAT-TACTTCAGGGATAGGTTTCGGCTTGACGA 415
||| ||| ||| | | |||||||||||||| | | ||||||||||| ||||||| | |
Sbjct 462 GGATGTGATGTGGTTGAACTTCGGAAGAATCT-CCTCAGGGATAGGACTCGGCTTAATTA 520
Query 416 GCTATGTGGTACCTGTCTATATAGCAGAAATTACGCCAAAACATGTTCGTGGTACATTTA 475
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 521 GCTATGTGGTACCTGTCTATATAGCAGAAATTTCACCAAAACATGTTCGTGGTACATTTA 580
Query 476 CGTTTTCAAACCAGCTTCTCCAAAACGCTGGACTCGCCATGATTTATTTTTGTGGGAA-T 534
| ||| |||| ||||| || |||||| |||||||||| ||| ||||||||| |||||| |
Sbjct 581 CCTTTACAAATCAGCTCCTTCAAAACTCTGGACTCGCAATGGTTTATTTTTCTGGGAATT 640
Query 535 TTCATCAATTGGAGGACGTTGGCTTTATTAGGTGCTTTACCATGCTTCATTCAAGTAATC 594
||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 641 TTC-TCAACTGGAGGATATTGGCTTTATTAGGTGCTTTACCATGCTTCATTCAAGTAATC 699
Query 595 GGTTTATTCTTCGTACCAGAGTCTCCAAGATGGCTGGCAAAAGTTGG-TACAGATAAAGA 653
||||||||||||||||||||||| ||||||||||||||||||||||| | | ||||||||
Sbjct 700 GGTTTATTCTTCGTACCAGAGTCCCCAAGATGGCTGGCAAAAGTTGGCTCC-GATAAAGA 758
Query 654 ACTAGAAAATTCACTGCTTCGGCTTAGAGGGAGAGATGCTGATATGTCACGTGAAGCCTC 713
||||||||||||||| ||||| ||||| ||| || |||||||||| ||||||||||||||
Sbjct 759 ACTAGAAAATTCACTTCTTCGTCTTAGGGGGGGAAATGCTGATATTTCACGTGAAGCCTC 818
Query 714 GGAAATTCAAGTTATGACCAAACTGGTAGAAAATGATTCAAAGTCGAGTATTTCTGATTT 773
|| ||| |||||||||||||| |||||||||||||||||||||||||| ||| ||||||
Sbjct 819 AGACATTGAAGTTATGACCAAAATGGTAGAAAATGATTCAAAGTCGAGTTTTTGTGATTT 878
Query 774 GTTTCAGAGAAAGTATAGATACACCCTCGTGGTAGGAATCGGGCTAATGTTGATACAACA 833
||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 879 GTTCCAGAGAAAATATAGATACACTCTCGTGGTAGGAATCGGGCTAATGTTGATACAACA 938
Query 834 ATTCTCAGGAAGTGCTGCTGTAATCTCTTATGCAAGTACCATTTTTA-GAAAAGCTGGTT 892
||| ||||||||| |||| || |||| ||||| ||||||||||| | | ||||| ||||
Sbjct 939 ATTTTCAGGAAGTTCTGCAGTGCTCTCATATGCCAGTACCATTTT-ACGGAAAGCAGGTT 997
Query 893 TTCCAGTGGCCATTGGAACGACGATGCTAGGTATCTTCGTGATTCCAAAAGCCATGATTG 952
|| | ||| |||||||| ||||| | |||||| ||||| |||| ||||||||||||||||
Sbjct 998 TTTCGGTGACCATTGGATCGACGCTACTAGGTCTCTTCATGATACCAAAAGCCATGATTG 1057
Query 953 GTCTCATTCTTGTCGATAAATGGGGCAGACGACCTCTGTTGTTGACTTCTGCGTTTGGGA 1012
|| |||||||||||||||||||||||||||| ||||| ||||||||||||| | |||||
Sbjct 1058 GTGTCATTCTTGTCGATAAATGGGGCAGACGGCCTCTCTTGTTGACTTCTGTATCTGGGA 1117
Query 1013 TGAGCATGACTTGCATGCTTCTTGGGGTCGCCTTCACATTACAGAAAATGCAATTGCTTT 1072
|| |||| |||| ||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 1118 TGTGCATAACTTCCATGCTTATTGGAGTCGCCTTCACATTACAGAAAATGCAATTGCTAC 1177
Query 1073 CGGAAG-TAACTCCAGTATT-ATCGTTTATATGCGTTATGCTGTATATTGCAACTTATGC 1130
|||| | |||| |||||||| | ||||||||||||||| ||||||||||| |||||||||
Sbjct 1178 CGGA-GCTAACACCAGTATTCA-CGTTTATATGCGTTACGCTGTATATTGGAACTTATGC 1235
Query 1131 AATAGGCTTGGGAGGCCTCCCTTGGGTAATTATGTCGGAGATATTTCCAATAAATATAAA 1190
||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1236 TATAGGCTTGGGAGGCCTTCCTTGGGTAATTATGTCTGAGATATTTCCAATGAATATAAA 1295
Query 1191 AGTAACCGCAGGAAGTATAGTTACGTTAGTCTCATTTTCAAGTAGTTCAATCGTCACTTA 1250
|||||| |||||||||||||| |||||||| |||| ||||||||||| |||||||||||
Sbjct 1296 AGTAACTGCAGGAAGTATAGTAACGTTAGTATCATGGTCAAGTAGTTCGATCGTCACTTA 1355
Query 1251 CGCTTTCAACTTTCTGTTCGAGTGGAGCACTCAAGGAACATTTTTTATATTCGGGGGTA- 1309
||||||||||||||| ||||||||||||||||||||||||||| |||| || | |
Sbjct 1356 TGCTTTCAACTTTCTGCTCGAGTGGAGCACTCAAGGAACATTTTACGTATTTGGAGC-AG 1414
Query 1310 TCGGCGGAGC-AGCGTTGCTTTTTATATGGTTGCTCGTTCCAGAAACGAAAGGATTGTCA 1368
|||| ||| | ||| ||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct 1415 TCGGAGGA-CTAGCATTGCTTTTTATTTGGTTGCTCGTTCCGGAAACGAAAGGATTATCA 1473
Query 1369 CTTGAAGAAATACAAGTTTCACTTATTCATCAGCCCGAC-GAAAGAAATCAAA 1420
|||||||||||||||| ||| ||||||| | ||||||| ||| ||||||||
Sbjct 1474 CTTGAAGAAATACAAGCTTCGCTTATTCGTGAGCCCGATAGAAT-AAATCAAA 1525
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70230562455
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5