BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg327109
Length=1041
Score E
Sequences producing significant alignments: (Bits) Value
AT4G08780.1 | Symbols: | Peroxidase superfamily protein | chr4... 1541 0.0
AT4G08770.1 | Symbols: Prx37 | Peroxidase superfamily protein |... 1502 0.0
AT5G19890.1 | Symbols: | Peroxidase superfamily protein | chr5... 91.6 1e-17
> AT4G08780.1 | Symbols: | Peroxidase superfamily protein | chr4:5604153-5608202
FORWARD LENGTH=1041
Length=1041
Score = 1541 bits (834), Expect = 0.0
Identities = 976/1045 (93%), Gaps = 8/1045 (1%)
Strand=Plus/Plus
Query 1 ATGCATTCCTCTTTGATAAAATTAGGATTTCTTTTTCTTCTTCTTCAGGTCTCATTGTCT 60
||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||
Sbjct 1 ATGCATTCCTCTTTGATAAAATTGGGATTTCTTCTTCTCCTTCTTCAGGTCTCATTGTCT 60
Query 61 CATGCTCAACTAAGCCCTTCCTTTTACGATAAAACATGTCCGCAAGTCTTTGACATTGTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 61 CATGCTCAACTAAGCCCTTCCTTTTACGATAAAACATGTCCGCAAGTCTTTGATATTGTA 120
Query 121 ACCAATACCATTGTCAATGCTCTGAGATCAGACCCTCGCATCGCTGCAAGCATCCTTCGT 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 121 ACCAATACCATTGTCAATGCGCTGAGATCAGACCCTCGCATCGCTGCAAGCATCCTTCGT 180
Query 181 CTTCATTTCCACGACTGCTTTGTTAATGGGTGTGATGCATCGATATTGTTAGACAACACA 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 181 CTTCATTTCCACGACTGCTTTGTTAATGGATGTGATGCATCGATATTGTTAGACAACACA 240
Query 241 ACATCGTTTAGGACGGAGAAAGATGCGTTTGGCAACGCTAATTCCGCTCGAGGTTTCGAT 300
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 241 ACATCGTTTAGGACGGAGAAAGATGCGTTTGGGAACGCTAATTCAGCTCGAGGTTTCGAT 300
Query 301 GTGATCGACAAAATGAAGGCTGCCGTAGAGAAAGCATGTCCTAGAACTGTTTCATGTGCT 360
|| ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct 301 GTAATCGACAAAATGAAGGCTGCCATCGAGAAAGCATGTCCTAGAACCGTTTCATGTGCT 360
Query 361 GATTTGCTCGCCATCGCAGCTCAAA-AATCTGTCGTTTTGGCGGGAGGTCCTTCATGGAT 419
||| ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||
Sbjct 361 GATATGCTCGCCATCGCAGCT-AAAGAATCTATCGTTTTGGCGGGAGGTCCTTCATGGAT 419
Query 420 GGTTCCAAATGGAAGAAGAGACAGCTTAAGAGGGTTTATGGATCTTGCTAAT-ATGAACC 478
||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||
Sbjct 420 GGTTCCAAATGGAAGAAGAGACAGCTTAAGAGGTTTTATGGATCTTGCTAATGAT-AACC 478
Query 479 TTCCAGGTCCATCCTCTACCCTTAAAGTACTTAAGGATAGATTCAAAAATGTCGGACTAG 538
||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||| |
Sbjct 479 TTCCAGGTCCATCTTCTACACTTAAACAACTTAAGGATAGATTCAAAAATGTCGGACTCG 538
Query 539 ACCGTCCTTCTGATCTTGTTGCTCTTTCGGGTGGTCACACCTTTGGCAAAAGCCAATGTC 598
||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 539 ACCGTTCTTCTGATCTAGTTGCTCTTTCCGGTGGTCACACTTTTGGCAAAAGCCAATGTC 598
Query 599 AGTTCATAATAGATCGGCTTTACAACTTCGGTGAAACCGGTTTACCTGACCCAACCCTTG 658
|||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 599 AGTTCATAATGGATCGTCTTTACAACTTCGGTGAAACCGGTTTACCCGACCCAACCCTTG 658
Query 659 ATAAATCTTACCTTGCCACGCTCAGAAAACAATGTCCGCTTAACGGAAACCAGAGTGTCT 718
||||||||||||| ||||| || |||||||||||||| | ||| ||||||||||||||||
Sbjct 659 ATAAATCTTACCTAGCCACACTAAGAAAACAATGTCCACGTAATGGAAACCAGAGTGTCT 718
Query 719 TGGTAGATTTTGATTTACGTACACCAACACTCTTTGACAATAAGTACTATTTGAATCTCA 778
|||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||
Sbjct 719 TGGTAGATTTTGATTTACGTACACCAACACTCTTTGACAACAAATACTATGTGAATCTCA 778
Query 779 AAGAGAACAAAGGACTGATCCAGAGCGACCAAGAGTTATTCTCTAGCCCGGATGCTGCAG 838
| |||||||||||||| ||||| || ||||||||||| ||||||||||| ||||||||||
Sbjct 779 AGGAGAACAAAGGACTTATCCAAAGTGACCAAGAGTTGTTCTCTAGCCCTGATGCTGCAG 838
Query 839 ATACTATCCCTTTAGTCCGAGAATACGCTAATGGTCAAGGGAAATTTTTCGATGCGTTCG 898
| ||| |||||||||| |||| ||||||| |||||||||||| |||||||||||||||||
Sbjct 839 ACACTCTCCCTTTAGTTCGAGCATACGCTGATGGTCAAGGGACATTTTTCGATGCGTTCG 898
Query 899 T-AAATGCAATGATAAGGATGGGAAGCCTTTCACCTTTAACAGGGAAACATGGAGAAATT 957
| ||| ||||| ||||||||| | || ||||||||||||||||||||||| ||||||||
Sbjct 899 TGAAA-GCAATAATAAGGATGAGTAGTCTTTCACCTTTAACAGGGAAACAAGGAGAAATA 957
Query 958 AGATTGAATTGTAGAGTGGTGAATTCGAAATCGAAAATCATGGATGTGGTGGATGATGCA 1017
|||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 958 AGATTGAACTGTAGAGTGGTGAATTCGAAATCTAAAATCATGGATGTGGTAGATGATGCT 1017
Query 1018 AATGAATTTGCCAG-TTCAATGTGA 1041
|||||||||||| || | |||||
Sbjct 1018 CTTGAATTTGCCAGCTTTA-TGTGA 1041
> AT4G08770.1 | Symbols: Prx37 | Peroxidase superfamily protein
| chr4:5598115-5600312 REVERSE LENGTH=1235
Length=1235
Score = 1502 bits (813), Expect = 0.0
Identities = 968/1044 (93%), Gaps = 6/1044 (1%)
Strand=Plus/Plus
Query 1 ATGCATTCCTCTTTGATAAAATTAGGATTTCTTTTTCTTCTTCTTCAGGTCTCATTGTCT 60
||||||||||||||||||||||| ||||||||| |||||||| ||||||| |||||||||
Sbjct 51 ATGCATTCCTCTTTGATAAAATTGGGATTTCTTCTTCTTCTTATTCAGGTATCATTGTCT 110
Query 61 CATGCTCAACTAAGCCCTTCCTTTTACGATAAAACATGTCCGCAAGTCTTTGACATTGTA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 111 CATGCTCAACTAAGCCCTTCCTTTTACGATAAAACATGTCCGCAAGTCTTTGACATTGCA 170
Query 121 ACCAATACCATTGTCAATGCTCTGAGATCAGACCCTCGCATCGCTGCAAGCATCCTTCGT 180
|||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 171 ACCACTACCATTGTCAATGCTCTAAGATCGGACCCTCGCATCGCTGCAAGCATCCTTCGT 230
Query 181 CTTCATTTCCACGACTGCTTTGTTAATGGGTGTGATGCATCGATATTGTTAGACAACACA 240
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 231 CTTCATTTCCACGACTGCTTTGTTAATGGATGTGATGCATCGATATTGTTAGACAACACC 290
Query 241 ACATCGTTTAGGACGGAGAAAGATGCGTTTGGCAACGCTAATTCCGCTCGAGGTTTCGAT 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 291 ACATCGTTTAGGACGGAGAAAGATGCGTTTGGGAACGCTAATTCCGCTCGAGGTTTCGAT 350
Query 301 GTGATCGACAAAATGAAGGCTGCCGTAGAGAAAGCATGTCCTAGAACTGTTTCATGTGCT 360
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 351 GTGATCGACAAAATGAAGGCTGCCGTGGAGAAAGCATGTCCTAAAACTGTTTCATGTGCT 410
Query 361 GATTTGCTCGCCATCGCAGCTCAAAAATCTGTCGTTTTGGCGGGAGGTCCTTCATGGATG 420
||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |
Sbjct 411 GATTTGCTCGCCATCGCGGCTCAAGAATCTGTCGTTTTGGCGGGAGGTCCTTCATGGAGG 470
Query 421 GTTCCAAATGGAAGAAGAGACAGCTTAAGAGGGTTTATGGATCTTGCTAAT-ATGAACCT 479
||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||
Sbjct 471 GTTCCAAATGGAAGAAGAGACAGCTTAAGAGGGTTCATGGATCTTGCTAATGAT-AACCT 529
Query 480 TCCAGGTCCATCCTCTACCCTTAAAGTACTTAAGGATAGATTCAAAAATGTCGGACTAGA 539
||||| ||||| || ||||||||| ||||||||||||||||||||| |||||||| ||
Sbjct 530 TCCAGCTCCATTCTTTACCCTTAACCAACTTAAGGATAGATTCAAAAACGTCGGACTCGA 589
Query 540 CCGTCCTTCTGATCTTGTTGCTCTTTCGGGTGGTCACACCTTTGGCAAAAGCCAATGTCA 599
|||| |||||||||| ||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 590 CCGTGCTTCTGATCTCGTTGCTCTTTCTGGTGGTCACACCTTTGGCAAAAACCAATGTCA 649
Query 600 GTTCATAATAGATCGGCTTTACAACTTCGGTGAA-ACCGGTTTACCTGACCCAACCCTTG 658
|||||||| ||||||||||| |||||| || || || |||||||| |||||||||||||
Sbjct 650 ATTCATAATGGATCGGCTTTATAACTTCAGT-AACACTGGTTTACCCGACCCAACCCTTG 708
Query 659 ATAAATCTTACCT-TGCCACGCTCAGAAAACAATGTCCGCTTAACGGAAACCAGAGTGTC 717
||||||||||||| | |||| ||||||||||||||||| | ||| ||||||||||||||
Sbjct 709 ATAAATCTTACCTCT-CCACACTCAGAAAACAATGTCCACGTAATGGAAACCAGAGTGTA 767
Query 718 TTGGTAGATTTTGATTTACGTACACCAACACTCTTTGACAATAAGTACTATTTGAATCTC 777
||||||||||||||||||||||| ||||||||||||||||| ||||| ||| |||| |||
Sbjct 768 TTGGTAGATTTTGATTTACGTACGCCAACACTCTTTGACAACAAGTATTATGTGAACCTC 827
Query 778 AAAGAGAACAAAGGACTGATCCAGAGCGACCAAGAGTTATTCTCTAGCCCGGATGCTGCA 837
|| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||
Sbjct 828 AAGGAGAACAAAGGACTTATCCAGAGCGACCAAGAGTTATTCTCTAGCCCTGATGCTTCA 887
Query 838 GATACTATCCCTTTAGTCCGAGAATACGCTAATGGTCAAGGGAAATTTTTCGATGCGTTC 897
|| ||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 888 GACACTCTTCCTTTAGTCCGAGAATACGCTGATGGTCAAGGGAAATTTTTCGATGCGTTC 947
Query 898 GTAAATGCAATGATAAGGATGGGAAGCCTTTCACCTTTAACAGGGAAACATGGAGAAATT 957
| || ||||||||||||||| | || ||||||||||||||||||||||| ||||||||
Sbjct 948 GCGAAGGCAATGATAAGGATGAGTAGTCTTTCACCTTTAACAGGGAAACAAGGAGAAATA 1007
Query 958 AGATTGAATTGTAGAGTGGTGAATTCGAAATCGAAAATCATGGATGTGGTGGATGATGCA 1017
|||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct 1008 AGATTGAACTGTAGAGTGGTGAATTCGAAATCTAAAATCATGGATGTGGTAGAAGATGCT 1067
Query 1018 AATGAATTTGCCAGTTCAATGTGA 1041
||||||||| || |||||||||
Sbjct 1068 CTTGAATTTGCAAGCTCAATGTGA 1091
> AT5G19890.1 | Symbols: | Peroxidase superfamily protein | chr5:6724115-6725923
REVERSE LENGTH=1290
Length=1290
Score = 91.6 bits (49), Expect = 1e-17
Identities = 53/55 (96%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 176 TTCGTCTTCATTTCCACGACTGCTTTGTTAATGGGTGTGATGCATCGATATTGTT 230
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 240 TTCGTCTTCATTTCCACGACTGCTTTGTTAATGGGTGTGATGCGTCGTTATTGTT 294
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51037893352
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5