BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg327156
Length=1452
Score E
Sequences producing significant alignments: (Bits) Value
AT4G09740.1 | Symbols: AtGH9B14, GH9B14 | glycosyl hydrolase 9B... 2228 0.0
AT4G23560.1 | Symbols: AtGH9B15, GH9B15 | glycosyl hydrolase 9B... 2089 0.0
AT3G42155.1 | Symbols: | glycosyl hydrolase family 9 protein |... 230 4e-59
> AT4G09740.1 | Symbols: AtGH9B14, GH9B14 | glycosyl hydrolase
9B14 | chr4:6142706-6145003 REVERSE LENGTH=1437
Length=1437
Score = 2228 bits (1206), Expect = 0.0
Identities = 1359/1435 (95%), Gaps = 2/1435 (0%)
Strand=Plus/Plus
Query 1 ATGGGCAAGCTCTTGG-TGTTAATGTTAGTTGGGATGTTCTTGGCTTTTGAAAGCTTGGA 59
|||||||| ||||||| || |||||||| ||||||||||||||||||| |||||||||||
Sbjct 1 ATGGGCAAACTCTTGGTTG-TAATGTTAATTGGGATGTTCTTGGCTTTCGAAAGCTTGGA 59
Query 60 AGCTCTTGACTATGGAGATGCACTAAACAAGTCAATCTTGTTCTTTGAAGGCCAAAGATC 119
|||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct 60 AGCTCTTGACTATGGAGATGCACTGAACAAATCAATTTTGTTCTTTGAAGGCCAAAGATC 119
Query 120 CGGTAAACTCCCGACTAACCAACGGGTTAAATGGCGTGCTGATTCTGCCCTCTCTGACGG 179
||||||||||||||||| ||| ||||||||||||| |||||||||| ||| ||||||||
Sbjct 120 TGGTAAACTCCCGACTAATCAAAGGGTTAAATGGCGAGCTGATTCTGGCCTGTCTGACGG 179
Query 180 TGCATCAGCTAATGTGAATTTGATTGGAGGATATTACGATGCTGGTGACAATGTAAAATT 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 TGCATCAGCTAATGTGAATTTGATTGGAGGATATTACGATGCTGGTGACAATGTAAAATT 239
Query 240 TGTGTGGCCAATGTCATTTACCACAACCTTATTGAGTTGGGCTGCAATTGAATACCAAAA 299
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||
Sbjct 240 TGTGTGGCCAATGTCATTTACCACAACCTTGTTGAGTTGGGCTGCACTTGAATACCAGAA 299
Query 300 TGAGATTACTTCCGTAAACCAGCTTGGTTATCTCCGGTCTACTATCAAATGGGCAACCAA 359
||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 300 TGAGATTACTTTCGTTAACCAGCTTGGTTATCTCCGGTCTACTATCAAATGGGGAACTAA 359
Query 360 TTTTATCCTCCGCGCTCATACTTCGCCCAACATGCTATATACTCAGGTGGGAGATGGAAA 419
|||||||||||| |||||||| ||| |||||||||||||||| ||||| |||||||||||
Sbjct 360 TTTTATCCTCCGTGCTCATACGTCGACCAACATGCTATATACACAGGTAGGAGATGGAAA 419
Query 420 TTCAGATCATAGTTGTTGGGAGAGGCCAGAAGATATGGACACACCTAGAACTCTCTACAG 479
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 420 TTCAGATCATAGTTGTTGGGAGAGACCAGAAGATATGGACACACCTAGAACTCTCTATAG 479
Query 480 TATCTCTTCCTCTTCCCCCGGTTCCGAAGCCGCGGGTGAAGCCGCAGCCGCTCTTGCCGC 539
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 480 TATCTCTTCCTCTTCCCCCGGTTCCGAAGCCGCAGGTGAAGCCGCAGCCGCTCTTGCCGC 539
Query 540 GGCCTCACTTGTTTTCAAACCGGTCGATTCTACTTATTCATCCAAGTTACTCAACCATGC 599
|||||||||||||||||||| ||| |||||||| ||||||||||| ||||| ||| ||||
Sbjct 540 GGCCTCACTTGTTTTCAAACTGGTTGATTCTACATATTCATCCAAATTACTAAACAATGC 599
Query 600 TAAATCCCTATTCGAATTTGCGGATAAGTACAGAGGTTCTTACCAAGCATCTTGCCCCTT 659
|||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 600 TAAATCCCTATTTGAATTTGCTGATAAGTACAGAGGTTCTTACCAAGCTTCTTGCCCCTT 659
Query 660 CTACTGCTCACACTCAGGCTATCAGGATGAACTTTTGTGGGCTGCGGCTTGGTTATACAA 719
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 660 CTACTGCTCACACTCAGGCTACCAGGATGAACTTTTGTGGGCTGCGGCTTGGTTATACAA 719
Query 720 AGCAACAGGGGAAAAGAGTTACTTAAATTATGTTATAAGCAATAAAGATTGGAGCCAAGC 779
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 720 AGCAACAGGGGAAAAGAGTTACTTAAATTATGTTATAAGCAACAAAGATTGGAGCAAAGC 779
Query 780 CGTGAATGAATTTAGCTGGGACAACAAATTCGCCGGTGTTCAAGCTTTACTCGCATCGGA 839
| | ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 780 CATCAATGAATTTAGTTGGGACAACAAATTCGCCGGCGTTCAAGCTTTACTCGCATCGGA 839
Query 840 GTTTTACAACGGGGCAAATGACTTGGAAAAATTTAAGACCGATGTTGAATCATTCGTCTG 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 GTTTTACAACGGGGCAAATGACTTGGAAAAATTTAAGACCGATGTTGAATCATTCGTCTG 899
Query 900 TGCATTGATGCCAGGAAGTAGCTCTCAACAAATTAAGCCAACTCCTGGTGGCATTTTGTT 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 TGCATTGATGCCAGGAAGTAGCTCTCAACAAATTAAGCCAACTCCTGGTGGCATTTTGTT 959
Query 960 TATTAGAGACAGTAGCAACTTACAATATGTAACAACGGCTACAACTGTTTTGTTCCATTA 1019
|||||||||||||||||||||||| ||||||||||||||||||||| | || ||| ||||
Sbjct 960 TATTAGAGACAGTAGCAACTTACAGTATGTAACAACGGCTACAACTATATTATTCTATTA 1019
Query 1020 CTCAAAAACTCTTACCAAAGCCCGGGTTGGTTCAATCCAATGCGGTTCGACCCAGTTCAC 1079
|||||||||||| ||||||||| |||||||||||||||| || || ||||| ||||||||
Sbjct 1020 CTCAAAAACTCTAACCAAAGCCGGGGTTGGTTCAATCCAGTGTGGGTCGACTCAGTTCAC 1079
Query 1080 CGCATCTCAAATTCGAAATTTCGCCAAATCACAGGTTGATTACATTCTTGGAAATAATCC 1139
|| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1080 CGTATCTCAAATTCGAAATTTTGCCAAGTCACAGGTTGATTACATTCTTGGAAATAATCC 1139
Query 1140 ATTGAAAATGTCTTACATGGTTGGATTTGGAACAAAGTACCCAACTCAACCTCATCATAG 1199
||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||
Sbjct 1140 ATTGAAAATGTCTTACATGGTTGGATTTGGAACAAAGTATCCTACACAACCTCATCATAG 1199
Query 1200 AGGCTCGTCATTACCGTCAATCCAATCTAAACCGGAGAAAATCGACTGCAATGGAGGATA 1259
||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 1200 AGGCTCGTCATTACCGTCAATCCAATCTAAACCAGAGAAAATCGACTGTAATGGAGGATT 1259
Query 1260 TTCATACTACAATTCTGATACACCGAACCCGAATGTCCATACCGGTGCAATCGTTGGCGG 1319
|||||||||||||| ||||||||| ||||||||||| |||||||| ||||| || |||||
Sbjct 1260 TTCATACTACAATTTTGATACACCAAACCCGAATGTGCATACCGGCGCAATTGTGGGCGG 1319
Query 1320 ACCGAATTCATCCGACCAGTATAGCGACAAAAGAACAGATTATTCTCATGCAGAGCCCAC 1379
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 ACCAAATTCATCCGACCAGTATAGCGACAAAAGAACAGATTATTCTCATGCAGAGCCCAC 1379
Query 1380 AACTTACATCAACGCCGCCTTTATTGGGCCCGTCGCTGCTCTCATCAGTTCTTCC 1434
|||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||
Sbjct 1380 AACTTACATCAATGCCGCCTTTATTGGGTCAGTCGCTGCTCTGATCAGTTCTTCC 1434
> AT4G23560.1 | Symbols: AtGH9B15, GH9B15 | glycosyl hydrolase
9B15 | chr4:12293332-12295859 REVERSE LENGTH=1812
Length=1812
Score = 2089 bits (1131), Expect = 0.0
Identities = 1351/1458 (93%), Gaps = 12/1458 (1%)
Strand=Plus/Plus
Query 1 ATGGGCAAGCTCTTGGTGTTAATGTTAGTTGGGATGTTCTTGGCTTTTGAAAGCTTGGAA 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 72 ATGGGAAAGCTCTTGGTGTTAATGTTAGTTGGGATGTTCTTGGCTTTTGAAAGCTTGGAA 131
Query 61 GCTCTTGACTATGGAGATGCACTAAACAAGTCAATCTTGTTCTTTGAAGGCCAAAGATCC 120
|||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct 132 GCTCTTGAATATGGAGATGCACTTAACAAGTCAATCTTGTTCTTTGAAGGCCAACGATCC 191
Query 121 GGTAAACTCCCGACTAACCAACGGGTTAAATGGCGTGCTGATTCTGCCCTCTCTGACGGT 180
||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| |||
Sbjct 192 GGTAAACTCCCGACTAACCAACGAGTTAAATGGCGAGCCGATTCTGCCCTCTCTGATGGT 251
Query 181 GCATC-AGCTAATGTGAATTTGATTGGAGGATATTACGATGCTGGTGACAATGTAAAATT 239
|| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 252 TCA-CTTGCTAATGTGAATTTAATTGGAGGATATTACGATGCTGGTGACAATGTAAAATT 310
Query 240 TGTGTGGCCAATGTCATTTACCACAACCTTATTGAGTTGGGCTGCAATTGAATACCAAAA 299
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 311 TGTGTGGCCAATGTCATTTACCACAACCTTGTTAAGTTGGGCTGCAATTGAATACCAAAA 370
Query 300 TGAGATTACTTCCGTAAACCAGCTTGGTTATCTCCGGTCTACTATCAAATGGGCAACCAA 359
||||||| ||||||| |||||||| |||||||||||||||||||||||||||| |||| |
Sbjct 371 TGAGATTTCTTCCGTTAACCAGCTCGGTTATCTCCGGTCTACTATCAAATGGGGAACCGA 430
Query 360 TTTTATCCTCCGCGCTCATACTTCGCCCAACATGCTATATACTCAGGTGGGAGATGGAAA 419
||| ||||| ||||||||||| || ||||||||||||||||| |||||||||||||| ||
Sbjct 431 TTTCATCCTACGCGCTCATACATCTCCCAACATGCTATATACCCAGGTGGGAGATGGTAA 490
Query 420 TTCAGATCATAGTTGTTGGGAGAGGCCAGAAGATATGGACACACCTAGAACTCTCTACAG 479
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 491 TTCAGATCATAGTTGTTGGGAGAGGCCAGAAGATATGGACACATCAAGAACTCTCTACAG 550
Query 480 TATCTCTTCCTCTTCCCCCGGTTCCGAAGCCGCGGGTGAAGCCGCAGCCGCTCTTGCCGC 539
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct 551 TATCTCTTCCTCTTCCCCTGGTTCTGAAGCCGCGGGTGAAGCCGCAGCCGCTCTTGCAGC 610
Query 540 GGCCTCACTTGTTTTCAAACCGGTCGATTCTACTTATTCATCCA-AGTTACTCAACCATG 598
||||||||||||||||||| |||||||||||||||||||||||| | || | |||||||
Sbjct 611 GGCCTCACTTGTTTTCAAATCGGTCGATTCTACTTATTCATCCACA-CTATTAAACCATG 669
Query 599 CTAAATCCCTATTCGAATTTGCGGATAAGTACAGAGGTTCTTACCAAGCATCTTGCCCCT 658
| ||| ||||||| |||||||| |||||||||||||||||||| |||||||||||||| |
Sbjct 670 CAAAAACCCTATTTGAATTTGCTGATAAGTACAGAGGTTCTTATCAAGCATCTTGCCCTT 729
Query 659 TCTACTGCTCAC-ACTCAGGCTATCAGGATGAACTT-TTGTGGGCTGCGGCTTGGTTATA 716
|||||||||| | |||| ||||| ||||||||| || || ||||||||||||||| ||||
Sbjct 730 TCTACTGCTC-CTACTCCGGCTACCAGGATGAA-TTATTATGGGCTGCGGCTTGGCTATA 787
Query 717 CAAAGCAACAGGGGA-AAAGAGTTACTTAAATTATGTTATAAGCAATAAAGATTGGAGCC 775
||||||||||| || ||| | |||| |||||||||||||||||||||||||||||||||
Sbjct 788 TAAAGCAACAGGAGATAAA-ATTTACATAAATTATGTTATAAGCAATAAAGATTGGAGCC 846
Query 776 AAGCCGTGAATGAATTTAGCTGGGACAACAAATTCGCCGGTGTTCAAGCTTTACTCGCAT 835
||||||| |||||||| || |||||||||||||||| ||| | |||||||||||||| ||
Sbjct 847 AAGCCGTTAATGAATTCAGTTGGGACAACAAATTCGTCGGCGCTCAAGCTTTACTCGTAT 906
Query 836 CGGAGTTTTACAACGGGGCAAATGACTTGGAAAAATTTAAGACCGATGTTGAATCATTCG 895
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||
Sbjct 907 CGGAGTTTTACAACGGGGCAAATGACTTGGCAAAATTTAAGTCCGATGTTGAATCCTTCG 966
Query 896 TCTGTGCATTGATGCCAGGAAGTAGCTCTCAACAAATTAAGCCAACTCCTGGTGGCATTT 955
|||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct 967 TCTGTGCAATGATGCCAGGAAGTAGCTCTCAACAAATTAAACCAACTCCTGGTGGCCTTT 1026
Query 956 TGTTTATTAGAGACAGTAGCAACTTACAATATGTAACAACGGCTACAACTGTTTTGTTCC 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1027 TGTTTATTAGAGACAGTAGCAACTTACAATATGTAACAACGGCTACAACTGTTTTGTTCC 1086
Query 1016 ATTACTCAAAAACTCTTACCAAAGCCCGGGTTGGTTCAATCCAATGCGGTTCGACCCAGT 1075
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||
Sbjct 1087 ATTACTCAAAAACTCTTACCAAAGCCGGGGTTGGTTCAATCCAGTGCGGTTCGACCAAGT 1146
Query 1076 TCACCGCATCTCAAATTCGAAATTTCGCCAAATCACAGGTTGATTACATTCTTGGAAATA 1135
|||||| |||||||||||||||||| |||||||||||||||||||| || ||||||||||
Sbjct 1147 TCACCGTATCTCAAATTCGAAATTTTGCCAAATCACAGGTTGATTATATCCTTGGAAATA 1206
Query 1136 ATCCATTGAAAATGTCTTACATGGTTGGATTTGGAACAAAGTACCCAACTCAACCTCATC 1195
||||| ||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||
Sbjct 1207 ATCCAATGAAAATGTCTTACATGGTCGGATTTGGGACAAAGTATCCAACACAACCTCATC 1266
Query 1196 ATAGAGGCTCGTCATTACCGTCAATCCAATCTAAACCGGAGAAAATCGACTGCAATGGAG 1255
|||||||||| || ||||| || ||||||||||||||||||||||| ||||| |||||||
Sbjct 1267 ATAGAGGCTCATCTTTACCATCGATCCAATCTAAACCGGAGAAAATTGACTGTAATGGAG 1326
Query 1256 GATATTCATACTACAATTCTGATACACCGAACCCGAATGTCCATACCGGTGCAATCGTTG 1315
|||||||||||||||||||||||||||| ||||||||||| |||| |||||||| || |
Sbjct 1327 GATATTCATACTACAATTCTGATACACCAAACCCGAATGTGCATATTGGTGCAATTGTGG 1386
Query 1316 GCGGACCGAATTCATCCGACCAGTATAGCGACAAAAGAA-CAGATTATTCTCATGCAGAG 1374
||||||||||||||||||| |||||||||||||||| || ||||||| |||||||| |||
Sbjct 1387 GCGGACCGAATTCATCCGATCAGTATAGCGACAAAA-AATCAGATTACTCTCATGCTGAG 1445
Query 1375 CCCACAACTTACATCAACGCCGCCTTTATTGGGCCCGTCGCTGCTCTCATCAGTTCTTCC 1434
|||||||||||||||||||||||||||||||| || || || ||||| ||||||||||||
Sbjct 1446 CCCACAACTTACATCAACGCCGCCTTTATTGGACCTGTTGCAGCTCTAATCAGTTCTTCC 1505
Query 1435 CGACAAACCCACGTTTAG 1452
|| |||| |||||||||
Sbjct 1506 GGATAAACTCACGTTTAG 1523
> AT3G42155.1 | Symbols: | glycosyl hydrolase family 9 protein
| chr3:14312295-14313498 REVERSE LENGTH=501
Length=501
Score = 230 bits (124), Expect = 4e-59
Identities = 207/243 (85%), Gaps = 22/243 (9%)
Strand=Plus/Plus
Query 442 AGGCCAGAAGATATGGACACACCTAGAACTCTCTACAGTATCTCTTCCTCTTCCCCCGGT 501
|||| | |||||||||||||||||||||||||||||| ||| ||||| |||||||| |||
Sbjct 277 AGGCGAAAAGATATGGACACACCTAGAACTCTCTACAATATATCTTCTTCTTCCCCTGGT 336
Query 502 TCCGAAGCCGCGGGTGAAGCCGCAGCCGCTCTTGCCGCGGCCTCACTTGTTTTCAAACCG 561
||||||| | | | |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 337 TCCGAAGTCTCTGCTGAAGCCGCAACCGCTCTTGCCGCGGCCTCACTTGTTTTCAAACCG 396
Query 562 GTCGATTCTACTTATTCATCCAAGTTACTCAACCATGCTAAATCCCTATTCGAATTTGCG 621
|| ||||||||||||||||||| | | | | | | | ||||||||
Sbjct 397 GTGGATTCTACTTATTCATCCA-----C-C-----T---A--T---T-T--GAATTTGCT 434
Query 622 GATAAGTACAGAGGTTCTTACCAAGCATCTTGCCCCTTCTACTGCTCACACTCAGGCTAT 681
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 435 GATAAGTACAGAGGTTCTTACCAAGCATCTTGCCCCTTCTACTGCTCACACTCAGGCTAC 494
Query 682 CAG 684
|||
Sbjct 495 CAG 497
Score = 119 bits (64), Expect = 9e-26
Identities = 72/76 (95%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 331 CTCCGGTCTACTATCAAATGGGCAACCAATTTTATCCTCCGCGCTCATACTTCGCCCAAC 390
|||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||
Sbjct 204 CTCCGGTCTACTATCAAATGGGGAAGCAATTTTATCTTCCGCGCTCATACTTCGCCCAAC 263
Query 391 ATGCTATATACTCAGG 406
||||||||||| ||||
Sbjct 264 ATGCTATATACACAGG 279
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 71585977170
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5