BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg327853 Length=1122 Score E Sequences producing significant alignments: (Bits) Value AT4G39020.1 | Symbols: | SH3 domain-containing protein | chr4:... 409 4e-113 > AT4G39020.1 | Symbols: | SH3 domain-containing protein | chr4:18182315-18184340 FORWARD LENGTH=510 Length=510 Score = 409 bits (221), Expect = 4e-113 Identities = 252/267 (94%), Gaps = 2/267 (1%) Strand=Plus/Plus Query 856 GAAGCCAATGATGGAGTCAATGCTTCTCAAATGCATAATGGAACATCAGACGCCATGGGA 915 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 244 GAAGCCAATGATGGAGTCAATGCTTCTCAAATGCATAATGGAACATCAGACGCCATGGGA 303 Query 916 TACTTCTTAGGAGAGGTCATGTTTCCGTATCAAGCTGAATCTGATTTTGAGCTCACCTTA 975 || ||||||||||||||||||||||| ||||||||||| || ||||||||||||| |||| Sbjct 304 TATTTCTTAGGAGAGGTCATGTTTCCATATCAAGCTGATTCAGATTTTGAGCTCAGCTTA 363 Query 976 TCAGTTGGAGAGTATGTTGTTATCAGAGAGGTAGTGAGTAGCGGGTGGGCAGAAGGAGAA 1035 ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 364 TCAGTTGGAGACTATGTTGTTATCAGAGAGGTAGTGAGTAGCGTGTGGGCAGAAGGAGAA 423 Query 1036 TGTAAAGGCAAAGCGGGGTGGTTTCCTTATGAT-TACATCGAAAGAAGGGATCGTGTCCT 1094 ||||||||||| ||||| |||||| |||| || |||||||||||||||||||||||| | Sbjct 424 TGTAAAGGCAACGCGGGTTGGTTTACTTAC-ATCTACATCGAAAGAAGGGATCGTGTCTT 482 Query 1095 CGCAACTAAGGTCATCGAGGTGTTCTA 1121 ||||||||||||||||||||| ||||| Sbjct 483 CGCAACTAAGGTCATCGAGGTCTTCTA 509 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55019797320 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5