BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg327889 Length=1029 Score E Sequences producing significant alignments: (Bits) Value AT4G39390.1 | Symbols: ATNST-KT1, NST-K1 | nucleotide sugar tra... 1507 0.0 AT4G09810.1 | Symbols: | Nucleotide-sugar transporter family p... 366 2e-100 > AT4G39390.1 | Symbols: ATNST-KT1, NST-K1 | nucleotide sugar transporter-KT 1 | chr4:18315575-18318043 FORWARD LENGTH=1504 Length=1504 Score = 1507 bits (816), Expect = 0.0 Identities = 957/1020 (94%), Gaps = 29/1020 (3%) Strand=Plus/Plus Query 1 ATGAGTGCAACAAGC-AGCAAGACGGATCAAAAAGCGGCATTAGACATTGCATCATGGCT 59 |||||||| || | | |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 314 ATGAGTGCTACTA-CAAGCAAGACGGATCAGAAAGCGGCATTAGACATTGCATCATGGCT 372 Query 60 ATTCAATGTTGTTACTTCCGTTGGAATCATCCTCGTTAACAAAGCTTTAATGGCTACTTA 119 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 373 ATTCAATGTGGTTACTTCCGTTGGAATCATCCTCGTTAACAAAGCTTTAATGGCTACTTA 432 Query 120 TGGCTTTAGTTTCGCTACAACATTAACCGGTTTGCATTTCGGAACAACCACATTGTTGAC 179 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 433 TGGCTTTAGTTTCGCTACTACATTAACCGGTTTGCATTTCGGAACAACGACATTGTTGAC 492 Query 180 AACTTTCTTGACATGGCTTGGTTATATCCAACCTTCTCAGCTTCCTTGGCCTGATCTTTT 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 493 AACTTTCTTGACATGGCTTGGTTATATCCAACCTTCTCAGCTTCCTTGGCCTGATCTTTT 552 Query 240 GAAATTCGTTTTGTTCGCTAACTTCTCCATTGTTGGGATGAACGTGAGTCTCATGTGGAA 299 ||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| Sbjct 553 GAAATTCGTTTTGTTCGCTAACTTCTCTATCGTTGGGATGAACGTCAGTCTCATGTGGAA 612 Query 300 TTCTGTTGGATTCTACCAGATTGCGAAGCTGAGTATGATCCCGGTTTCTTGTTTTCTAGA 359 ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 613 TTCTGTTGGCTTCTACCAGATTGCGAAGCTGAGTATGATCCCGGTTTCTTGTCTTCTAGA 672 Query 360 AGTTATGCTTGACAATGTCAGGTATTCAAGAGATACAAAGCTTAGCATTTTGTTAGTTCT 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 673 AGTTATGCTTGACAATGTCAGGTATTCAAGAGATACAAAGCTTAGCATTTTGTTAGTTCT 732 Query 420 TGCTGGTGTTGCCGTCTGTACTGTAACCGATGTTAGTGTCAATCTCAACGGATTTCTCGC 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 733 TGCTGGTGTTGCCGTCTGTACTGTAACCGATGTTAGTGTCAATCTCAACGGATTTCTAGC 792 Query 480 TGCTGCTATTGCTGTCTGGAGCACCGCGCTCCAGCAATACTATGTACATTATCTACAACG 539 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 793 TGCCGCTATTGCTGTCTGGAGCACCGCGCTTCAGCAATACTATGTACATTATCTACAACG 852 Query 540 GAAATATTCACTCGGTTCTTTCAATTTACTGGCGCATACCGCTCCAGTTCAAGCTGCATC 599 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 853 GAAATATTCACTCGGTTCTTTCAATTTACTGGCGCATACCGCTCCAGTTCAAGCTGCGTC 912 Query 600 ATTGTTGTTGGTCGGACCATTTCTAGACTACTGGTTGACAAACCAAAGAGTGGATGCATA 659 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 913 ATTGTTGTTGGTCGGACCATTTCTAGACTACTGGTTGACTAACCAAAGAGTGGATGCATA 972 Query 660 CAACTTTTCATTTGTATCTCTGCTCTACCTAACCCAATCTTTTGGGCAGTTCTTCTTAAT 719 |||| | ||| || | || || | | || | |||||||||||| Sbjct 973 CAAC---T--TTT-CAT-T-TG---TA--T----C--TC---T-----GTTCTTCTTAAT 1005 Query 720 ACTATCGTGCAGTATAGCGGTCGGGACCAATCTCAGCCAATTCATCTGTATCGGAAGGTT 779 ||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| || Sbjct 1006 ACTCTCGTGCAGTATCGCGGTTGGGACCAATCTCAGCCAATTCATCTGTATTGGAAGATT 1065 Query 780 CACGGCGGTGTCTTTTCAAGTACTTGGTCACATGAAGACAATTCTGGTTTTGGTTTTGGG 839 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1066 CACGGCGGTGTCTTTCCAAGTACTTGGTCACATGAAGACAATTCTGGTTTTGGTTTTGGG 1125 Query 840 ATTCACTTTCTTTGGTAAGGAAGGTTTAAACCTACAAGTAGTGCTTGGAATGCTCATTGC 899 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1126 ATTCACTTTCTTCGGTAAGGAAGGATTAAACCTACAAGTAGTGCTTGGAATGCTGATTGC 1185 Query 900 GATCCTAGGTATGATCTGGTACGGTAATGCATCTTCTAAACCGGGCGGTAAAGAGCGCCG 959 || || |||||||||||||||||||||||||||||||||||||| |||||||| || || Sbjct 1186 TATACTCGGTATGATCTGGTACGGTAATGCATCTTCTAAACCGGGTGGTAAAGAACGTCG 1245 Query 960 TAGCCTCTCTATTCCTATAACCAAGTCACAGAAACTATCTGAAACAAACGAATCTGATGA 1019 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1246 TAGCCTGTCTATTCCCATAACCAAGTCACAGAAACTATCTGAAACAAACGAATCTGATGA 1305 > AT4G09810.1 | Symbols: | Nucleotide-sugar transporter family protein | chr4:6175176-6177293 REVERSE LENGTH=1388 Length=1388 Score = 366 bits (198), Expect = 2e-100 Identities = 472/601 (79%), Gaps = 31/601 (5%) Strand=Plus/Plus Query 61 TTCAATGTTGTTACTTCCGTTGGAATCATCCTCGTTAACAAAGCTTTAATGGCTACTTAT 120 ||||||||||||||||| ||||| |||||| | ||||| ||||||||||||||||||||| Sbjct 199 TTCAATGTTGTTACTTCTGTTGGTATCATCATTGTTAATAAAGCTTTAATGGCTACTTAT 258 Query 121 GGCTTTAG-TTTCGCTACAACATTAACCGGTTTGCATTTCGGAACAACCACATTGTTGAC 179 |||||||| ||| |||||||| ||||||||||| ||||||| || || || ||| |||| Sbjct 259 GGCTTTAGCTTT-GCTACAACGTTAACCGGTTTACATTTCGCCACTACGACGTTGATGAC 317 Query 180 AACTT-TCTTGACATGGCTT-GGTTATATCCAACCTTCTCAGCTTCC-TTGGCCTGATCT 236 ||| | || | ||| || || ||||| ||||||||||| ||||| || | || || Sbjct 318 G-CTTGTTTTAAGATGT-TTAGGATATATACAACCTTCTCATCTTCCATTTACA-GAGCT 374 Query 237 T-TTGAAATTCGTTTTGTTCGCTAACTTCTCCATTGTTGGGATGAACGTGAGTCTCATGT 295 | || || || || |||| ||||| || || |||||||| ||||| || ||||| |||| Sbjct 375 TCTT-AAGTTTATTCTGTTTGCTAATTTTTCGATTGTTGGAATGAATGTTAGTCTTATGT 433 Query 296 GGAATTCTGTTGGATTCTACCAGATTGCGAAGCTGAGTATGATCCCGGTTTCTTGTTT-T 354 |||| |||||||| || || |||||||| ||||| || ||||| || || || || || | Sbjct 434 GGAACTCTGTTGGGTTTTATCAGATTGCAAAGCTTAGCATGATTCCTGTATCATGCTTGT 493 Query 355 CTAGAAGT--TATGCTTGACAATG-T-CAGGTATTCAAGAGATACAAAGCTTAGCATTTT 410 | ||||| ||| |||| || | | | | || |||||||||||||| ||||||||| Sbjct 494 -TGGAAGTAGTAT--TTGATAA-GATTC-GTTACTCAAGAGATACAAAACTTAGCATTG- 547 Query 411 G--TTAGTTCTTGCTGGTGTTGCCGTCTGTACTGTAACCGATGTTAGTGTCAATCTC-AA 467 | || ||||||| |||||||| || |||||||| || ||||||||||| || | | || Sbjct 548 GACTT-GTTCTTGTTGGTGTTGGTGTTTGTACTGTTACTGATGTTAGTGTTAA-CACCAA 605 Query 468 CGGATTTCTCGCTGCTGCTATTGCTGTCTGGAGCACCGCGCTCCAGCAATACTATGTACA 527 || ||| | |||||| | ||||||| ||||| || || | || |||||||||||||| Sbjct 606 AGGTTTTGTTGCTGCTTTTGTTGCTGTGTGGAGTACTGCTTTGCAACAATACTATGTACA 665 Query 528 TTATCTACAACGGAAA-TATTCACTCGGTTCTTTCAATTTACTGGCG-CATACCGCTCCA 585 ||||||||| || ||| || || || | || ||||| |||||| | ||||| |||||| Sbjct 666 TTATCTACAGCG-AAAGTACTCGCTTAGCTCATTCAACCTACTGG-GTCATACTGCTCCA 723 Query 586 GTTCAAGCTGCATCATTGTTGTTGGTCGGACCATTTCTAGACTACTGGTTGACAAACCAA 645 | ||| |||||| | || ||| | ||||| |||||||| ||||| ||||||||| || || Sbjct 724 GCTCAGGCTGCAACGTTATTGATAGTCGGTCCATTTCTCGACTATTGGTTGACAGAC-AA 782 Query 646 A 646 | Sbjct 783 A 783 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50435083588 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5