BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg327926
Length=2595
Score E
Sequences producing significant alignments: (Bits) Value
AT4G39756.1 | Symbols: | Galactose oxidase/kelch repeat superf... 1543 0.0
AT4G39753.1 | Symbols: | Galactose oxidase/kelch repeat superf... 1448 0.0
AT4G39060.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 121 4e-26
AT4G19250.1 | Symbols: | Galactose oxidase/kelch repeat superf... 111 3e-23
AT4G19330.1 | Symbols: | Galactose oxidase/kelch repeat superf... 110 9e-23
> AT4G39756.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr4:18441756-18443000 FORWARD LENGTH=1195
Length=1195
Score = 1543 bits (835), Expect = 0.0
Identities = 1035/1130 (92%), Gaps = 19/1130 (2%)
Strand=Plus/Plus
Query 1480 ATGGATTCCGAAGTCGAACCATCGCAGAAAAAGAAGAAACCAAATTCATCTCCGTCGTTT 1539
||||||||||||| ||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct 1 ATGGATTCCGAAGCCGAACCACCGCAGGAAAAGAAGAAACCAAATTCATGTCCGTCGTTT 60
Query 1540 GTGTCCCTTCCTGATGTAATCCTTGTAAACTGTTTAGCCCGCATACCGAAATCGTACTAC 1599
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTGTCCCTTCCTGAAGAAATCCTTGTAAACTGTTTAGCCCGCATACCGAAATCGTACTAC 120
Query 1600 CCGAAACTCTCCTTAGTCTGCAAGAGCTTCTGCTCTCTCATCTTATCCATGGAGCTCTAT 1659
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 121 CCGAAACTCTCCTTAGTCTGCAAGAGCTTCTGCTCTCTCATCTTATCCATGGAACTTTAC 180
Query 1660 GTAGAGCGATTGTACCTTCGAAGACATGAAGACGTCTTTCACGTCTGCTTACAGTTGCCC 1719
|| ||||||||||||||| | | ||||||||||||| |||||||||||||||||||||||
Sbjct 181 GTGGAGCGATTGTACCTTGGTACACATGAAGACGTCCTTCACGTCTGCTTACAGTTGCCC 240
Query 1720 GATCGTCGTCTTCCCTCATGGTTTAGTCTCTGGACTAAACCGGATCAAACCCTAACCAAT 1779
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GATCGTCGTCTTCCTTCATGGTTTAGTCTCTGGACTAAACCGGATCAAACCCTAACCAAC 300
Query 1780 GACATCGGGAAGAAGAAAAAGTCTACTAGAAATACTTTGTTGGTACCAATACCTTCTTCT 1839
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 301 GACATTGGGAAGAAGAAAAAGTCCACTAGAAATACTTTGTTGGTACCAATACCTTCTTCT 360
Query 1840 TACTCTCCTCGTGTACCAATGTTCATCGGTGAGATTGGTTCAGAATTATACGCTATTAGC 1899
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TATTCTCCTCGTGTACCAATGTTCATCGGTGAGATTGGTTCAGAATTATACGCTATTAGC 420
Query 1900 AAACATAATAGTCCGTCCTCGGTCATGTGGGTTCGTAATAAGAGTACTAACTACGCCTGG 1959
|||||||||| ||| ||||| ||||||||||||||| |||||| || || || ||||||
Sbjct 421 AAACATAATACTCCATCCTCCGTCATGTGGGTTCGTGATAAGACTAGTATTTATGCCTGG 480
Query 1960 CGTAAAGCCCCTAGCATGACAGTAGCTCGAGCCAATGTTTTTGCTTGTGTAATCAATGGG 2019
|||||||||||||| |||||||||||||| |||||||||||||||| ||| |||||||||
Sbjct 481 CGTAAAGCCCCTAGTATGACAGTAGCTCGTGCCAATGTTTTTGCTTATGTCATCAATGGG 540
Query 2020 AAAATATACGTAATGGGAGGTTGTGCAGCAGATGAATC-AATGAATTGGGCTGAGGTTTT 2078
|||||||||||||||||||||||||| ||||||||||| || | ||||||||||||| ||
Sbjct 541 AAAATATACGTAATGGGAGGTTGTGCCGCAGATGAATCTAA-GTATTGGGCTGAGGTATT 599
Query 2079 CGACCCAAAGACTCAAACTTGGGAACCTTTACCTGACCCTGGGGATGAGTTACGCTTATC 2138
|||||||||||||||||||||| |||||||| ||||||| |||| ||||||||| ||||
Sbjct 600 CGACCCAAAGACTCAAACTTGGAAACCTTTAACTGACCCGGGGGCCGAGTTACGCGTATC 659
Query 2139 TTCATTTAAAACTATGGAGGTGATCGAAGGAAAGATTTACGTTAAGAAAAGCTATACGAT 2198
|||| ||| | ||||| ||||| ||||||||||||||| |||||||| |||||| ||
Sbjct 660 TTCAATTATAGGTATGGCGGTGAGCGAAGGAAAGATTTATGTTAAGAACAGCTATGTGAA 719
Query 2199 GGACTATGTTTATGATCCGGAAGAAGATAAATGGGACGTTA-TCACAAGAGCATTCATGA 2257
|||||| |||||||||||||||||||||||||||||||| | | |||| |||||||||
Sbjct 720 GGACTACGTTTATGATCCGGAAGAAGATAAATGGGACGT-AGTTGCAAGCTCATTCATGA 778
Query 2258 TTGAGAGAAAGTGTGAGATAGAGAATGTATTGTACCGTTGTCGTGGACAAAGTTGTTCGT 2317
||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||
Sbjct 779 TTGAGAGAAAGTGTGAGATAGAGAATGTATTGTACCGTTTTAGTAGACAAAGTTGTTCGT 838
Query 2318 GGTATGACACAAAGCAGAAAGAATGGAGAGATATCAAGGGTTTGGCTACATTGAATAGGT 2377
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 GGTATGACACAAAGCATAAAGAATGGAGAGATATCAAGGGTTTGGCTACATTGAATAGGC 898
Query 2378 ATCGTCGTTCTTA-TGTTATTGAAGTAGCTAACTACTGTGACAAACTCTTAATCTTGTGG 2436
|||||||||| | | || |||||||||| || ||| |||||||| ||||||||||||||
Sbjct 899 GTCGTCGTTCT-AGTATTCTTGAAGTAGCGAAGTACGGTGACAAAGTCTTAATCTTGTGG 957
Query 2437 GAAATCTTTGCGAAGC------A--AAA-CAAGAATATTTGGTGTGCCGTGATTTCACTT 2487
|||||||||||||||| | ||| ||||| |||||||||||| |||||| | |||
Sbjct 958 GAAATCTTTGCGAAGCCTTTTTATCAAAACAAGAGTATTTGGTGTGCGGTGATTGCGCTT 1017
Query 2488 -AAAAGGCGTAAAGAT-GATGAAATTTGGGGAAAGGTTGAGTGGGCTAGTATTGTGCTTA 2545
||||| |||||| || ||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1018 GAAAAG-CGTAAA-ATTGATGAAATTTGGGGAAAGGTTAAGTGGGCTAGTATTGTGCTTA 1075
Query 2546 CGGTTCCTAGTTCATATGTTTTCTTGCGTTGTGAAGTGAAACCGGTTTGA 2595
|||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1076 CGGTTCCTAGATCATATGTTTTCTTGCGTTGTGAAGTGAAACCGGTTTGA 1125
> AT4G39753.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr4:18440112-18441445 FORWARD LENGTH=1334
Length=1334
Score = 1448 bits (784), Expect = 0.0
Identities = 995/1092 (91%), Gaps = 34/1092 (3%)
Strand=Plus/Plus
Query 403 GAAACCGCCGCCTCTGCGGCTACGACATCCATAGCCGAACCACCGTCGAAAAAGAGGAAA 462
|||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||
Sbjct 32 GAAACCGCCGCCTCTGCGGCTACGACTTCCAAAGGCGAACCACCGTCGAAAAAGAGGAAA 91
Query 463 ACGAATCCATCTCCTCCTCTTCCTCCTCCGTCGTTTTTGTCACTCCCAGATGTTCTCATC 522
||||||||| || ||||||||||||| |||||||||||||||||||||||||
Sbjct 92 ACGAATCCA--------TC-TCCTCCTCCGTCGCTTTTGTCACTCCCAGATGTTCTCATT 142
Query 523 CTAAACTGCTTATCCCGCATACCGAAATCGTATTACCCTAAACTCTCCATAGTCTCCAAG 582
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 143 CTAAACTGTTTATCCCGTATACCGAAATCGTATTACCCTAAACTCTCCATAGTCTCCAAA 202
Query 583 ACATTTCGTGATCTCATCTTATCCATTGATCTTAACCACGCTCGATTTCACCACAAAACA 642
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 203 ACATTTCGTGATCTCATCATATCCATTGATCTTAACCACGCTCGATTTCACCACAAAACA 262
Query 643 CAAGAAAC-CTTTTTTCATGTCTGCTTAAAGTTTCCCGATCGTCCTCTTCCCTCTTGGTA 701
|||| ||| |||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 263 CAAG-AACACTTTTTTCATGTCTGCTTAAAGCTTCCCGATCGTCCTCTTCCCTCGTGGTA 321
Query 702 CACACTCTGGATCAAACCTGAAGGATTCGATGAC-A--AGGA-G-G-AG--G-AGAAGAA 752
|||||||||||||||||| |||||||||||||| | |||| | | || | |||||||
Sbjct 322 CACACTCTGGATCAAACCCCAAGGATTCGATGACAAGGAGGAGGAGAAGAAGAAGAAGAA 381
Query 753 GAAGTCTACATTGGTACAAGTACCCTCTTCCTATGCTTCTCATAA-TCCATTGCTCGTCG 811
||||||||| |||||||||||||| ||||||||||||||||| || ||||||||||| |
Sbjct 382 GAAGTCTACCTTGGTACAAGTACCTTCTTCCTATGCTTCTCA-AACACCATTGCTCGTAG 440
Query 812 TTA-GTGTTGATTCAGATGTCTATGCATTCAAACAATGTTATCCTCCCTCACGCGTCATG 870
|| || ||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 441 -TAGGTATTGATTCAGATGTCTATGCATTCAAACAATGTTATCCTCCCTCTCGGGTCATG 499
Query 871 TATGTTCGTAACAAGGAGGT-TGTCTTATGGCGTAATGCCCCCAACATGACTGTAGCTCG 929
| ||||||||||||||| || |||| ||||||||||||||||| |||||||||| ||| |
Sbjct 500 TTTGTTCGTAACAAGGA-GTGTGTCATATGGCGTAATGCCCCCGACATGACTGTGGCTAG 558
Query 930 CGCGAATCCTGTTGCGTACGTCTTCGATAAGAAAATATACGTAATGGGAGGTTGTGCGGA 989
|| ||||||||||| ||||||||||||| ||||||||| || |||||||||||||||||
Sbjct 559 AGCTAATCCTGTTGCCTACGTCTTCGATAGGAAAATATATGTTATGGGAGGTTGTGCGGA 618
Query 990 AAATGAATCTGCAAATTGGGGTGAGGTTTTTGATCCAAAGACTCAAACTTGGGAATCTTT 1049
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 619 AACCGAATCCGCAAATTGGGGTGAGGTTTTTGATCCAAAGACTCAAACTTGGGAACCTTT 678
Query 1050 ACCTGTCCCTGCCCCTGAGCTTCGCTTCTCTTCAATGATTAGAAAACTAGAGATGATCCA 1109
|||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 679 ACCTGTCCCTTCCCCTGAGCTCCGCTTCTCTTCAATGATTAGAAAAATAGAGATGATCCA 738
Query 1110 AGGAAAGTTTTACGTCAGGAGCAATGAGAGCAAGGACTCTGTTTATGATCCGAAAA-ATG 1168
||||||||||||||| ||||||||||| ||||||||||||||||||||||||| || | |
Sbjct 739 AGGAAAGTTTTACGTGAGGAGCAATGACAGCAAGGACTCTGTTTATGATCCGATAAGA-G 797
Query 1169 -GTAAGTGGAACGTTGCAGCAAAACCGTTGGTGAGTGATAGTAGGTGTGCGGTAGGTGAT 1227
| || |||||||||||||| |||||| | ||| ||||||||||||| |||||||| ||
Sbjct 798 AGAAA-TGGAACGTTGCAGCGAAACCGCAGTTGAATGATAGTAGGTGTTCGGTAGGTAAT 856
Query 1228 GTTTGGTACTCTTTTCGTCCCAACAGTTGT-TTGTGGTTTGACAATGAAATTCAAGATTG 1286
||||||||||||| |||||||||||||| | ||||||||||||||||||||| || ||||
Sbjct 857 GTTTGGTACTCTTGTCGTCCCAACAGTT-TCTTGTGGTTTGACAATGAAATTAAAAATTG 915
Query 1287 GAGACTGGTCAAGGGTTTGTCTTCCTTGAATCAGAGTTGTCGTAGTGGTTTGATTGAAAC 1346
||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 916 GAGACTGATCAAGGGTTTGTCTTCGTTGAATCATAGTTGTCGTAGTGGTTTGATTGAAAC 975
Query 1347 AGTTAGCTACGATGGGAAACTCTTACTCTTGTGGGACAAGCCTACAAAGCCTCGTCGTCG 1406
|||| ||||||||||||| |||||||| ||||||||||||||||| |||||||| |||||
Sbjct 976 AGTTTGCTACGATGGGAATCTCTTACTATTGTGGGACAAGCCTACCAAGCCTCGCCGTCG 1035
Query 1407 TGTTTGTGGAGAGAAGTATATTTGCTGTGCGTTGATTGCGTTTGAA-AAGCGCAAAAATG 1465
|||||||| ||| |||||||||||||||||||||||| ||||| || |||||||||||||
Sbjct 1036 TGTTTGTGAAGACAAGTATATTTGCTGTGCGTTGATTTCGTTT-AATAAGCGCAAAAATG 1094
Query 1466 GTCAAGTTTGGG 1477
||||||||||||
Sbjct 1095 GTCAAGTTTGGG 1106
Score = 226 bits (122), Expect = 9e-58
Identities = 840/1166 (72%), Gaps = 132/1166 (11%)
Strand=Plus/Plus
Query 1485 TTCCGAAGTCGAACCATCG-CAGAAAAAGAAG-AAACCAA---AT-TCAT-CTCCGTCG- 1536
|||| ||| ||||||| || | |||||||| | |||| || || || | ||||||||
Sbjct 58 TTCCAAAGGCGAACCACCGTC-GAAAAAGAGGAAAACGAATCCATCTCCTCCTCCGTCGC 116
Query 1537 TTTGTGTCCCTTCCTGATGTAATCCTTGTAAACTGTTTAGCCCGCATACCGAAATCGTAC 1596
||| |||| || || ||||| || || ||||||||||| |||| ||||||||||||||
Sbjct 117 TTT-TGTCACTCCCAGATGTTCTCATTCTAAACTGTTTATCCCGTATACCGAAATCGTAT 175
Query 1597 TACCCGAAACTCTCCTTAGTCTGCAAGAGC--TTCTGCT-CTCTCATCTTATCCATGGAG 1653
||||| ||||||||| |||||| ||| | | ||| | | ||||||| ||||||| ||
Sbjct 176 TACCCTAAACTCTCCATAGTCTCCAA-AACATTTC-G-TGATCTCATCATATCCATTGAT 232
Query 1654 CTCTATGTA-GAGCGATTGT-ACCTTC-GAAGACATGAAGACGTCTTTCACGTCTGCTTA 1710
|| || | | ||||| | ||| | || ||| ||| || | ||||| |||||||||
Sbjct 233 CT-TAACCACGCTCGATT-TCACC-ACAAAACACAAGAACACTTTTTTCATGTCTGCTTA 289
Query 1711 CAG-TTGCCCGATCGTCGTCTTCCCTCATGGTTTAGTCTCTGGACT-AAA-CCGGATCAA 1767
|| || |||||||||| ||||||||| |||| | ||||||| | ||| || | |
Sbjct 290 AAGCTT-CCCGATCGTCCTCTTCCCTCGTGGTACACACTCTGGA-TCAAACCCCAAGGAT 347
Query 1768 ACCCTAACCAATGACATCGG-GAAGAAGAAAAAGTCTACTAGAAATACTTTGTTGGTACC 1826
| | | ||| || || ||||||||| ||| | |||| | || |||||| |
Sbjct 348 TCGATGA-CAAGGA-GGAGGAGAAGAAGAAGAAG---A--AGAAGT-CTACCTTGGTA-C 398
Query 1827 AA-TACCTTCTTCTTACT-CTCCTCGTGTACCAATGTTCATCGGTGA-G-ATTGGTTCAG 1882
|| |||||||||| || | || ||| |||| || || | || | | |||| |||||
Sbjct 399 AAGTACCTTCTTCCTA-TGCTTCTCAAACACCATTGCTCGT-AGT-AGGTATTGATTCAG 455
Query 1883 AAT-TATACGCTATTAGCAAAC-A--TAATAGTCCGTCCTC-GGTCATGTGGGTTCGTAA 1937
|| | || || ||| ||||| | | || ||| | ||| |||||||| ||||||||
Sbjct 456 -ATGTCTATGC-ATT--CAAACAATGTTATCCTCCCT-CTCGGGTCATGTTTGTTCGTAA 510
Query 1938 TAA-GAGTACTAACTACGCCTGGCGTAAAG-CCCCTAGCATGACAGTAGCTCGAGCCAAT 1995
|| |||| | | | |||||||| | |||| | |||||| || ||| |||| |||
Sbjct 511 CAAGGAGT-GT--GT-CATATGGCGTAATGCCCCCGA-CATGACTGTGGCTAGAGCTAAT 565
Query 1996 GTTTTTGCTTGTGTAATCAATGGGAAAATATACGTAATGGGAGGTTGTGCAGCAGA-TGA 2054
| |||| | || || || |||||||||| || |||||||||||||| | | | ||
Sbjct 566 CCTGTTGCCTACGTCTTCGATAGGAAAATATATGTTATGGGAGGTTGTGC-GGAAACCGA 624
Query 2055 ATCAATGAATTGGGCTGAGGTTTTCGACCCAAAGACTCAAACTTGGGAACCTTTACCTGA 2114
||| ||||||| ||||||||| || |||||||||||||||||||||||||||||||
Sbjct 625 ATCCGCAAATTGGGGTGAGGTTTTTGATCCAAAGACTCAAACTTGGGAACCTTTACCTGT 684
Query 2115 CCCTGGGGATGAGTTACGCTTATCTTCA-T--TTA-AAACTATGGAGGTGATCGAAGGAA 2170
|||| |||| | ||||| |||||| | ||| ||| || ||| ||||| ||||||
Sbjct 685 CCCTTCCCCTGAGCTCCGCTTCTCTTCAATGATTAGAAAA-ATAGAGATGATCCAAGGAA 743
Query 2171 AGATTTACGTTAAGAAAAGCTAT-AC-G-ATGGACTATGTTTATGATCCGG-AAGAAGAT 2226
|| ||||||| | || || || || | | ||||| ||||||||||||| |||| ||
Sbjct 744 AGTTTTACGTGAGGA---GCAATGACAGCAAGGACTCTGTTTATGATCCGATAAGA-GAG 799
Query 2227 AAATGGGACGTTATCA-C-AAGA--GCATTCATGATTGAGAGAAAGTGTGAGATAGAG-A 2281
|||||| ||||| || | || | ||| | ||| ||| || | |||| | ||| | |
Sbjct 800 AAATGGAACGTTG-CAGCGAA-ACCGCAGT--TGAATGATAGTAGGTGTTCGGTAG-GTA 854
Query 2282 ATGTATTG-TAC-CGTTGTCGTGGACAA-AGTTG-TTCGTGGTATGACAC--AAAGCAGA 2335
|||| ||| ||| | ||||||| ||| |||| || ||||| ||||| ||| | |
Sbjct 855 ATGT-TTGGTACTC-TTGTCGTCC-CAACAGTTTCTT-GTGGTTTGACAATGAAATTA-A 909
Query 2336 AAGAATGGAGAGAT-ATCAAGGGTTTGGCTACATTGAAT-AG-GTA-TCGTCGTTCTTAT 2391
|| | |||||| | |||||||||||| || | |||||| | || |||| || || |
Sbjct 910 AA-ATTGGAGAC-TGATCAAGGGTTTGTCTTCGTTGAATCATAGTTGTCGTAGTGGTT-T 966
Query 2392 GTTATTGAAGTAGCTAACTACTG-TGACAAACTCTTAATCTTGTGGGA-AATCTTT---- 2445
| |||||| || | |||| | || || |||||| | |||||||| || | |
Sbjct 967 G--ATTGAAACAGTTTGCTAC-GATGGGAATCTCTTACTATTGTGGGACAAGCCTACCAA 1023
Query 2446 GC---GAAG-CA--------AA-ACAAGAATATTTGGTGTGCCGT-GATTTCACTTAA-A 2490
|| | | | || ||||| ||||||| ||||| || |||||| |||| |
Sbjct 1024 GCCTCGCCGTCGTGTTTGTGAAGACAAGTATATTTGCTGTGC-GTTGATTTCGTTTAATA 1082
Query 2491 AGGCGTAAAGATGATGAAATTTGGGGAAAGGTTGAGTGGGCTAGTATTGTGCTTACGGTT 2550
|| || ||| ||| | || ||||||| |||||||||||| ||| | ||||||||||||||
Sbjct 1083 AG-CGCAAAAATGGTCAAGTTTGGGGTAAGGTTGAGTGGTCTAATGTTGTGCTTACGGTT 1141
Query 2551 CCTAGTTCATAT-GTTTTCTTGCGTT 2575
|| |||||||| |||| ||||||||
Sbjct 1142 CCCAGTTCATACCGTTT-CTTGCGTT 1166
> AT4G39060.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: Galactose oxidase/kelch repeat superfamily protein
(TAIR:AT4G19250.1); Has 375 Blast hits to 365 proteins in 7
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants
- 367; Viruses - 0; Other Eukaryotes - 6 (source: NCBI
BLink). | chr4:18202607-18204634 FORWARD LENGTH=1107
Length=1107
Score = 121 bits (65), Expect = 4e-26
Identities = 69/71 (97%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 2050 GATGAATCAATGAATTGGGCTGAGGTTTTCGACCCAAAGACTCAAACTTGGGAACCTTTA 2109
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 432 GATGAATCAACGAATTGGGCTGAGGTTTTCGACCCAAAGACTCAAACTTGGGAACCTTTA 491
Query 2110 CCTGACCCTGG 2120
|| ||||||||
Sbjct 492 CCGGACCCTGG 502
> AT4G19250.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr4:10531504-10532190 FORWARD LENGTH=687
Length=687
Score = 111 bits (60), Expect = 3e-23
Identities = 133/168 (79%), Gaps = 6/168 (4%)
Strand=Plus/Plus
Query 1963 AAAGCCCCTAGCATGACAGTAGCTCG-AGCCAATGTTTTTGCTTGTGTAATCAATGGGAA 2021
||||| |||||||||| || ||||| | | || | ||| | || || | || ||||
Sbjct 55 AAAGCTCCTAGCATGATGGTGGCTCGTA-CGAACGCCTTTACGTGCGTCCTTGAT-GGAA 112
Query 2022 AA-TATACGTAATGGGAGGTTGTGCAGCAGATGAATC-AATGAATTGGGCTGAGGTTTTC 2079
|| |||| ||||||||||| |||| ||| |||||||| | | |||||||||| ||||||
Sbjct 113 AACTATATGTAATGGGAGGATGTGAAGCGGATGAATCTACT-CATTGGGCTGAAGTTTTC 171
Query 2080 GACCCAAAGACTCAAACTTGGGAACCTTTACCTGACCCTGGGGATGAG 2127
|||||||||||||||||||||||| | || || || ||||| | ||||
Sbjct 172 GACCCAAAGACTCAAACTTGGGAAGCATTGCCGGATCCTGGAGTTGAG 219
> AT4G19330.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr4:10554982-10558675 FORWARD LENGTH=1614
Length=1614
Score = 110 bits (59), Expect = 9e-23
Identities = 95/112 (85%), Gaps = 3/112 (3%)
Strand=Plus/Plus
Query 2018 GGAAAA-TATACGTAATGGGAGGTTGTGCAGCAGATGAATC-AATGAATTGGGCTGAGGT 2075
|||||| |||| ||||||||||| |||| ||| |||||||| | | |||||||||| ||
Sbjct 1009 GGAAAACTATATGTAATGGGAGGATGTGAAGCGGATGAATCTACT-CATTGGGCTGAAGT 1067
Query 2076 TTTCGACCCAAAGACTCAAACTTGGGAACCTTTACCTGACCCTGGGGATGAG 2127
|||||||||||||||||||||||||||| | || || || ||||| | ||||
Sbjct 1068 TTTCGACCCAAAGACTCAAACTTGGGAAGCATTGCCGGATCCTGGAGTTGAG 1119
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 128828709624
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5