BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg328081
Length=2181
Score E
Sequences producing significant alignments: (Bits) Value
AT4G36870.1 | Symbols: BLH2, SAW1 | BEL1-like homeodomain 2 | c... 3144 0.0
AT2G23760.1 | Symbols: BLH4, SAW2 | BEL1-like homeodomain 4 | c... 767 0.0
> AT4G36870.1 | Symbols: BLH2, SAW1 | BEL1-like homeodomain 2 |
chr4:17369320-17373930 FORWARD LENGTH=2530
Length=2530
Score = 3144 bits (1702), Expect = 0.0
Identities = 2076/2242 (93%), Gaps = 83/2242 (4%)
Strand=Plus/Plus
Query 1 ATGGGAATAGCTAAAACTTCTCCTACTACTACAACTCTCTTGAAGACTCTTCACAATAAT 60
||||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||||
Sbjct 104 ATGGGAATAACTAAAACTTCTCCTAATACTACAATTCTCTTGAAGACTTTTCACAATAAT 163
Query 61 TCTA--T-----G----TC--C--CA--A-GAT--T-AT---CACCAAGGAGGAATCTTC 96
|||| | | || | || | || | || ||||||||||| ||||||
Sbjct 164 TCTATGTCCCAAGATTATCATCATCATCATCATCATAATCAACACCAAGGAGGTATCTTC 223
Query 97 AACTTCTCTAATGGATTCGACCGATCAGATTCTCCCAATTTAACAACTCAGCAGAAGCAA 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 224 AACTTCTCTAATGGATTCGACCGATCAGATTCTCCCAATTTAACAACTCAGCAGAAGCAA 283
Query 157 GAGCATCAAAGGGTAGAGATGGACGAGGAACCCTCAG-CGGCCGGAGATAGGATTCCGGT 215
|||||||||||||||||||||||||||||| | |||| | ||||||| ||||||||||||
Sbjct 284 GAGCATCAAAGGGTAGAGATGGACGAGGAATCTTCAGTC-GCCGGAGGTAGGATTCCGGT 342
Query 216 CTACGAATCTGCCGGAATGTTATCCGAGATGTTTAATTTCCCCGGAAGCAGTGGTGGAGG 275
||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 343 CTACGAATCAGCCGGTATGTTATCCGAAATGTTTAATTTCCCCGGAAGCAGCGGTGGAGG 402
Query 276 AAGAGATCTCGACCAT-GGCCAATCTTTCCGGTCAAATAGGCAGTTGCTTGAGGAGCAAC 334
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 403 AAGAGATCTCGACC-TCGGCCAATCTTTCCGGTCAAATAGGCAGTTGCTTGAGGAGCAAC 461
Query 335 ATCAGAATATTCCGGCCATGAATGCTACGGATTCGGCCACTGCCACCGCGGCCGCCATGC 394
|||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||
Sbjct 462 ATCAGAATATTCCGGCTATGAATGCTACGGATTCAGCCACCGCCACCGCAGCCGCCATGC 521
Query 395 AGTTATTCTTGATGAATCCACCGCCACCGCAACAACCACAGTCTCCGTCATCCACAACTA 454
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 522 AGTTATTCTTGATGAATCCACCGCCACCGCAACAACCACCGTCTCCGTCATCCACAACTT 581
Query 455 CCACAAGGAGCCATCACAATTCATCAACTCTTCACATGTTACTTCCAAATCCATCCACCA 514
|| |||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct 582 CCCCAAGGAGCCACCACAATTCTTCAACTCTTCACATGTTACTTCCAAGTCCATCCACCA 641
Query 515 ACACAACTCACCATCAAG-GCTACACGAATCATATGTCTATGCATCAGCTTCCACATCAG 573
||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||
Sbjct 642 ACACAACTCACCATC-AGAACTACACTAATCATATGTCTATGCATCAGCTTCCACATCAG 700
Query 574 CATCACCAACAG--AT-GACGTGGCAGTACTCTTCCTCCTCCGATCATCATCATCA-CA- 628
|||||||| ||| || |||||||||| |||| || | |||||||||||||||| ||
Sbjct 701 CATCACCAGCAGATATCGACGTGGCAG---TCTT-CT-C-CCGATCATCATCATCATCAT 754
Query 629 -ACAACAGCCAAACCGAAATCGGGACCGTCCACGTGG-AAA-A-C--A-G---CGGAGGA 678
||||||||||||| || || |||||||||||||||| ||| | | | | |||||||
Sbjct 755 CACAACAGCCAAACGGAGATTGGGACCGTCCACGTGGAAAACAGCGGAGGACACGGAGGA 814
Query 679 CAAGGCTTGTCCTTATCTCTCTCATCGTCTTTAGAGGCTGCAGCAAAAGCGGAAGAGTAT 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAAGGCTTGTCCTTATCTCTCTCATCGTCTTTAGAGGCTGCAGCAAAAGCGGAAGAGTAT 874
Query 739 AGAAACATTTACTACGGAGCCAATTCTTCTAACGCATCACCTCATCATCAATACAATCAA 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 875 AGAAACATTTACTACGGAGCCAATTCTTCTAACGCATCACCTCATCATCAATACAATCAA 934
Query 799 TTCAAGACTCTTCTTGCTAATTCTTCTCAACATCAACATCAAGTACTAAACCAATTCCGA 858
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 935 TTCAAGACTCTTCTTGCTAATTCTTCTCAACATCACCATCAAGTATTAAACCAATTCCGA 994
Query 859 TCATCTCCGGCGGCTTCTTCCTCTTCCATCGG-AGCGGTCAATATCTTAAGAAACTCGAG 917
||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 995 TCATCTCCGGCTGCTTCTTCCTCTTCCAT-GGCAGCGGTCAATATCTTAAGAAACTCGAG 1053
Query 918 GTACACAACGGCCGCACAAGAGTTGTTGGAAGAGTTTTGTAGTGTTGGAAGAGGATTTTT 977
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1054 GTACACAACGGCCGCGCAAGAGTTGTTGGAAGAGTTTTGTAGTGTTGGAAGAGGATTTTT 1113
Query 978 AAAGAAGAACAAACATGGGAACAGCTCAAACCCTAATACTAGCGGTGGCGATGGCGGTGG 1037
||||||||||||| ||||||||||||||||||||||||| ||||||| ||||| |||
Sbjct 1114 GAAGAAGAACAAACTTGGGAACAGCTCAAACCCTAATACTTGCGGTGGTGATGG---TGG 1170
Query 1038 TGGCAGCTCTCCTCCGTCAGCCGGAGCAGTA-AAGGATCATCCTCCTTTATCGGCGTCTG 1096
||||||||||||| |||| ||||||||| | ||||| ||||||||||||||||||||||
Sbjct 1171 TGGCAGCTCTCCTTCGTCGGCCGGAGCAA-ACAAGGAGCATCCTCCTTTATCGGCGTCTG 1229
Query 1097 ATCGGATTGAGCATCAAAGAAGGAAAGTGAAACTACTCACCATGCTTGAAGAGGTGGACC 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1230 ATCGGATTGAGCATCAAAGAAGGAAAGTGAAACTACTCACCATGCTTGAAGAGGTGGACC 1289
Query 1157 GACGGTACAACCATTACTGCGAGCAAATGCAGATGGTTGTGAATTCTTTCGACATAGTAA 1216
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1290 GACGGTACAACCATTACTGCGAGCAAATGCAGATGGTTGTGAACTCTTTCGACATAGTAA 1349
Query 1217 TGGGCCACGGTGCGGCGTTACCGTACACCGCATTGGCTCAAAAAGCCATGTCAAGGCATT 1276
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 1350 TGGGCCACGGTGCGGCATTACCGTACACCGCATTGGCTCAAAAAGCTATGTCAAGACATT 1409
Query 1277 TTCGATGCCTTAAAGACGCTGTTACGGCTCAGCTTAAGCAGAGTTGCGAACTTCTTGGGG 1336
|| ||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||
Sbjct 1410 TTAGATGCCTTAAAGATGCAGTTGCGGCTCAGCTTAAGCAGAGTTGCGAACTTCTTGGGG 1469
Query 1337 ACAAAGATGCAGCCGGGA-TATCTTCTTCCGGATTAACTAAAGGCGAAACTCCGCGGTTG 1395
||||||||||||| |||| | ||||||||||| ||||| ||||| ||||||||||| |||
Sbjct 1470 ACAAAGATGCAGC-GGGAATCTCTTCTTCCGGGTTAACAAAAGGTGAAACTCCGCGTTTG 1528
Query 1396 CGTTTGTTAGAACAGAGTTTGCGTCAGCAAC-GTGCGTTTCATCAAATGGGTATGATGGA 1454
|||||| |||| || |||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1529 CGTTTGCTAGAGCAAAGTTTGCGTCAG-AACCGTGCGTTTCATCAAATGGGTATGATGGA 1587
Query 1455 ACAAGAAGCGTGGCGGCCACAACGCGGTTTGCCTGAACGCTCCGTTAATATACTTAGAGC 1514
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1588 ACAAGAAGCTTGGCGGCCACAACGCGGTTTGCCTGAACGCTCCGTCAATATACTTAGAGC 1647
Query 1515 TTGGCTCTTCGAGCATTTCCTTCACCCGTATCCAAGTGATGCAGATAAACACCTCTTGGC 1574
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1648 TTGGCTCTTCGAACATTTCCTTCACCCGTATCCAAGTGATGCAGATAAACACCTATTGGC 1707
Query 1575 TCGACAGACTGGTTTATCCAGAAATCAGGTGTCAAATTGGTTCATAAATGCTAGGGTTCG 1634
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1708 TCGACAGACTGGTTTATCCAGAAATCAGGTATCAAATTGGTTCATAAATGCTAGGGTTCG 1767
Query 1635 TTTATGGAAACCCATGGTGgaagaaatgtatcaacaagaatcaaaagaaagagaaagaga 1694
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1768 TTTATGGAAACCAATGGTGGAAGAAATGTACCAACAAGAATCAAAAGAAAGAGAAAGAGA 1827
Query 1695 aagagaagaggaattagaagagaacgaagaagatcaagaaacaaaaaaCAGCAACAACGA 1754
| ||| || | |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1828 A-GAG--GA--A-TTAGAAGAGAACGAAGAAGATCAAGAAACAAAAAACAGCAACGACGA 1881
Query 1755 CAAGAGCACAAAATCCAACAACGATGAAAGCAACTTCACTGCCGCTCGGACCACTTCACA 1814
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 1882 CAAGAGCACAAAATCCAACAACAATGAAAGCAACTTCACTGCCGTTCGGACCACTTCACA 1941
Query 1815 AACTCCAACGACAACC--AC-A--C-CA---GACGCA-AC--AG---TAGCGACAGGCCA 1859
|||||||||||||||| || | | || |||||| || || |||||||||||||
Sbjct 1942 AACTCCAACGACAACCGCACCAGACGCATCAGACGCAGACGCAGCAGTAGCGACAGGCCA 2001
Query 1860 CCGTCTAAGATCCGACATTAATGCTTACGAAAGCGACCCTTCATCAATTCTACTCCCTTC 1919
||||||||||||| |||||||||||||||||| |||| |||||||| |||||||||||||
Sbjct 2002 CCGTCTAAGATCCAACATTAATGCTTACGAAAACGACGCTTCATCACTTCTACTCCCTTC 2061
Query 1920 CTCTTATTCCAACGCCGCCGCTTCTGCCGCAGTTTCTGACGACTTGAATTCTCGTTACGG 1979
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 2062 CTCTTATTCCAACGCCGCCGCTCCTGCCGCTGTTTCTGACGACTTGAATTCTCGTTACGG 2121
Query 1980 TGGCTCAGCCGCGTTTTCCGCCGTTGCCACGTGTCAACAAGGTGTTGGCGGGTTTGATGA 2039
|||||||| ||||||||||||||||||||||||||||||| |||| || ||||| |||||
Sbjct 2122 TGGCTCAGACGCGTTTTCCGCCGTTGCCACGTGTCAACAAAGTGTAGGTGGGTTCGATGA 2181
Query 2040 TGCTGACATGGATGGGGTTAATGTTATAAGGTTTGGGACAAACCCTACTGGTGACGTGTC 2099
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2182 TGCTGACATGGATGGTGTTAACGTTATAAGGTTTGGGACAAACCCTACTGGTGACGTGTC 2241
Query 2100 ACTCACGCTTGGTTTACGCCACGCTGGAAACATGCCTGACAAGGACGCTTCTTTTTGCGT 2159
||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 2242 TCTCACGCTTGGTTTACGCCACGCTGGAAACATGCCTGACAAAGACGCTTCTTTCTGCGT 2301
Query 2160 TAGAGAGTTTGGGGGTTTTTAG 2181
||||||||||||||||||||||
Sbjct 2302 TAGAGAGTTTGGGGGTTTTTAG 2323
> AT2G23760.1 | Symbols: BLH4, SAW2 | BEL1-like homeodomain 4 |
chr2:10107709-10112823 REVERSE LENGTH=2213
Length=2213
Score = 767 bits (415), Expect = 0.0
Identities = 998/1260 (79%), Gaps = 118/1260 (9%)
Strand=Plus/Plus
Query 601 TCTTCCTCCTCCGATCATCATCATCACAACAACAGCCAAACCGAAATCGGGACCGTCCAC 660
||||||||||||||||||||||| | ||| | | | | | ||||| |||||||||
Sbjct 478 TCTTCCTCCTCCGATCATCATCA--A-AAC--C-GAGATA-TG--ATCGGAACCGTCCAC 528
Query 661 GTGGAAAACAGCGGAGGACAA-GGCTTGTCCTTATCTCTCTCATCGTCTTTAGAGGCTGC 719
|||| | | |||||| || || ||||| |||||||||||||| || || | || ||
Sbjct 529 GTGG---A-A--GGAGGA-AAGGGTTTGTCTTTATCTCTCTCATCTTCATT--A-GCCGC 578
Query 720 AGCAAAAGCGGAAGAGTATAGAAACATTTA--CT--A--CG--GA--G--C--C-AATTC 764
||| ||||| || || ||||||| |||||| | | || || | | | |||
Sbjct 579 AGCTAAAGCCGAGGAATATAGAAGCATTTATTGTGCAGCCGTTGATGGAACTTCTTCTTC 638
Query 765 TTCTAACGCAT-CAC-C-TCATCATCAATACAATCAATTCAAG-A-C-TCTTCTTGCTAA 818
||||||||||| | | | ||||||||||| |||||| |||||| | | |||||||| ||
Sbjct 639 TTCTAACGCATCCGCTCATCATCATCAATTCAATCAGTTCAAGAATCTTCTTCTTGAGAA 698
Query 819 ---TTCTTCTCAACATCA--A-CATCAAG-TACT--A-A-ACCAATTC--C--GATCATC 863
||||||||||||||| | ||||||| | | | | ||| | ||||||
Sbjct 699 TTCTTCTTCTCAACATCATCACCATCAAGTTGTTGGACATTTTGGTTCATCATCATCATC 758
Query 864 T-CC--GGCGGCTTCTTCCTCTTCCATCGGAGCGG-TCAATATC-TTAAGAAACTCGAGG 918
| || ||||||||| | || ||||| |||| || || | | | || || || ||||
Sbjct 759 TCCCATGGCGGCTTC-T--TCATCCATTGGAG-GGATCTACA-CGTTGAGGAATTCGAAA 813
Query 919 TACAC--AACGGCCGCACAAGAGTTGTTGGAAGAGTTTTGTAGTGTTGGAAGAGGATTTT 976
|| || ||| | || ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 814 TATACGAAAC--CGGCTCAAGAGTTGTTGGAAGAGTTTTGTAGTGTTGGAAGAGGACATT 871
Query 977 TAAAGAAGAACAAAC--A-TGGGAACAGCTCAAACCCTAATACTAGCGGTGGCGATGGCG 1033
| ||||||||||||| | | |||||| ||||||||||||||||| |||| | || || |
Sbjct 872 TCAAGAAGAACAAACTTAGTAGGAACAACTCAAACCCTAATACTACCGGT-G-GA-GGAG 928
Query 1034 GTGGTGGCA-GCT-CTCCTCCGTCAGCCGGAGCAG-TAAAGGATCA-TCCTCCTTTATCG 1089
| || || | | | ||| | | || |||||| ||| | || ||| | ||||||||| ||
Sbjct 929 GAGGCGG-AGGGTCCTCGT-CATCGGCCGGAACAGCT-AATGAT-AGTCCTCCTTTGTCT 984
Query 1090 GCGTCTGATCGGATTGAGCATCAAAGAAGGAAAGTGAAACTACTCA-CCATGCTTGAAGA 1148
|| ||||||||||||| ||||||||||| ||||| || ||||| | | |||||||||||
Sbjct 985 CCGGCTGATCGGATTGAACATCAAAGAAGAAAAGTCAAGCTACT-ATCTATGCTTGAAGA 1043
Query 1149 GGTGGACCGACGGTACAACCATTACTGCGAGCAAATGCAGATGGTTGTGAATTCTTTCGA 1208
||||||||||||||||||||| |||||||| |||||||| ||||| ||||| || |||||
Sbjct 1044 GGTGGACCGACGGTACAACCACTACTGCGAACAAATGCAAATGGTAGTGAACTCATTCGA 1103
Query 1209 -CATAGTAATGGGCCACGGTGCGGC-GTTACCGTACACCG-CATTGGCTCAAAAAGCCAT 1265
|| ||||||||| |||| ||||| ||| ||||||| || |||| |||||||| || ||
Sbjct 1104 CCA-AGTAATGGGTTACGGCGCGGCGGTT-CCGTACA-CGACATTAGCTCAAAAGGCAAT 1160
Query 1266 GTCAAGGCATTTTCGATGCCTT-AAAGACGCTGTTA-CGGCTCAGCTTAAGCAG-AGTTG 1322
||| |||||||| || || || |||||||| | || ||| ||||||||| | | || ||
Sbjct 1161 GTCTAGGCATTTCCGGTG-TTTGAAAGACGC-GGTAGCGGTTCAGCTTAAAC-GCAGCTG 1217
Query 1323 CGAACTTCTTGGGGACAAAGATGCAGC-CGGGATATCTTCTTCCGGATTAACTAAAGGCG 1381
|| ||||| ||||| ||||| || || ||| | | || || || ||||| ||||| |
Sbjct 1218 TGAGCTTCTAGGGGATAAAGAGGCGGCAGGGGCT-GCATCCTCGGGGTTAACCAAAGGGG 1276
Query 1382 AAACTCCGCGGTTGCGTTTGTTAGAACAGAGTTTGCGTCAGCAACGTGCGTTTCATCAAA 1441
|||| ||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| |
Sbjct 1277 AAACGCCGCGATTGCGTTTGCTAGAGCAGAGTTTGCGTCAGCAACGAGCGTTTCATCATA 1336
Query 1442 TGGGTATGATGGAACAAGAAGCGTGGCGGCCACAACGCGGTTTGCCTGAACGCTCCGTTA 1501
||||||||||||| ||||| || ||| | || ||||| ||||||||||||||||||||||
Sbjct 1337 TGGGTATGATGGAGCAAGAGGCATGGAGACCGCAACGTGGTTTGCCTGAACGCTCCGTTA 1396
Query 1502 ATATACTTAGAGCTTGGCTCTTCGAGCATTTCCTTCACCCGTATCCAAGTGATGCAGATA 1561
|||| |||||||||||||| ||||||||||| ||| | ||||| ||||| ||||| ||||
Sbjct 1397 ATATCCTTAGAGCTTGGCTATTCGAGCATTTTCTTAATCCGTACCCAAGCGATGCTGATA 1456
Query 1562 AACACCTCTTGGCTCGACAGACTGGTTTATCCAGAAATCAGGTGTCAAATTGGTTCATAA 1621
| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1457 AGCACCTCTTAGCACGACAGACTGGTTTATCCAGAAATCAGGTGTCAAATTGGTTCATAA 1516
Query 1622 ATGCTAGGGTTCGTTTATGGAAACCCATGGTGgaagaaatgtatcaacaagaatcaaaag 1681
||||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||||||
Sbjct 1517 ATGCTAGGGTTCGCCTATGGAAACCAATGGTGGAAGAGATGTATCAACAAGAAGCAAAAG 1576
Query 1682 aaagagaa-a-g-agaaaga-gaagaggaat-tagaagag-aacgaagaagatcaagaaa 1735
|||||||| | | |||| || ||| | ||| | || | ||| ||||||| || | ||
Sbjct 1577 AAAGAGAAGAAGCAGAA-GAAGAAAATGAAAATC-AACAACAACAAAGAAGA-CA-GCAA 1632
Query 1736 caaaaaaCAGCAACAACGACAAGAGCACAAAATCCAACAACGATGAAAGCAACTTCACTG 1795
|||| || | ||||||||||| || || |||||||| |||||| |||||||||||
Sbjct 1633 CAAACAA-A-CAACAACGACACGAA-AC-----CCAACAACAATGAAAACAACTTCACTG 1684
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 108182174475
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5