BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg328116
Length=4191
Score E
Sequences producing significant alignments: (Bits) Value
AT4G36520.1 | Symbols: | Chaperone DnaJ-domain superfamily pro... 2122 0.0
> AT4G36520.1 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr4:17230589-17235518 REVERSE LENGTH=4352
Length=4352
Score = 2122 bits (1149), Expect = 0.0
Identities = 1345/1440 (93%), Gaps = 12/1440 (1%)
Strand=Plus/Plus
Query 652 AAGTATTACAGTAGTGAACCTTTTGTTACTGTTTCTGAGATTGGTTTGAAGACTCATCCT 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 834 AAGTATTACAGTAGTGAACCTTTTGTTACTGTTTCTGAGATTGGTTTGAAGACTCATCCT 893
Query 712 ACTGGAATACCACCTTCATCGAGAGCAGCTCCTATATTGAAGAGTGATTTTAGAAGTTCG 771
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 894 ACTGGAATACCACCTCCATCGAGAGCAGCTCCTATATTGAAGAGTGATTTTAGAAGTTCG 953
Query 772 GCTTCTAATTCTAAAAGTACTGGATCACAAGGATCTGCGGATAGTAGT--T-CTCCACCG 828
|||||||||||||||| ||||||||||||||||||| ||||||||| | ||||| ||
Sbjct 954 GCTTCTAATTCTAAAACCACTGGATCACAAGGATCTGTAGATAGTAGTAGTTCTCCAACG 1013
Query 829 TTCTTTGATGTAGAGGTTGATGCAAATTCAGCTGCAGTGAGAGAAGCTATGGTAAAAGCT 888
||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||
Sbjct 1014 TTCTTTGATGTAGAGGTTGATGCTAATTCAGCTGCTGTGAGAGAAGCTATGCTAAAAGCT 1073
Query 889 GAGGCAAAATTAAAAAGTGCAAAAGAGCTGTTAGAAAGGAAGAGGGATGGGGCACGAACC 948
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 1074 GAGGCAAAATTAAAAAGTGCAAAAGAGCTGTTAGAAAGGAAGAGGGATGTGGCACGGACC 1133
Query 949 ACCGCAAAGCCAACCTCCACGAAGAATAGAATAGCCGAGGAAGGGAAATCGAGCCATACA 1008
||| ||| |||| |||||||||||||||||||| |||||||||||||||||| || ||
Sbjct 1134 ACCTCAACGCCATCCTCCACGAAGAATAGAATAAAAGAGGAAGGGAAATCGAGCTATGCA 1193
Query 1009 GCTGGTTTGCCCGTAGTTAAGACTAATATTGATGTAGCTAGAAATTCTTTGAGGGATAAG 1068
||||||||||| || ||||||| ||||||||||||||| ||||| ||||||| |||||||
Sbjct 1194 GCTGGTTTGCCAGTTGTTAAGAGTAATATTGATGTAGCAAGAAAGTCTTTGAAGGATAAG 1253
Query 1069 CGTGGAAGCAAGTCTCTGTCTTCTCAAGGGTCAGCAAACTCTGATGGAAATGATGAATGG 1128
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1254 CGTGGAAGCAAGTCTCTGTCTTCTCAAGGGTCAGCAACCTCTGATGGAAATGATGAATGG 1313
Query 1129 AAAGAGGCTAAT---CAATTTGTTGAATTGGTGAGAACAGAGCTACCAAGAAATGCTGAT 1185
||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1314 AAAGAAGCTAATAATCAATATGTTGAATTGGTGAGAACAGAGCTACCAAGAAATGCTGAT 1373
Query 1186 GAGAGTAGTGGTGGAAAAGATGTTTCTATTCCCCTTAATGCAGAGTTTTTCGATCAGGAG 1245
|||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1374 GAGAACAGTGGTGGAAAAGATGTTTCTATTCCTCTTAATGCTGAGTTTTTCGATCAGGAG 1433
Query 1246 CTGACATGGGCAG-CTAATGTTGACTGGGAGAAACAGCGGAGGAGAGCAAAAGGAGATAG 1304
||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1434 CTGACATGGGCAGGC-AATGTTGACTGGGAGAAACAACGGAGGAGAGCAAAAGGAGATAG 1492
Query 1305 GGAGGATCATGAAGCTAGGAAATTGCCAAAACAC-CATGGAACGAGAAAGGTAGCATCTA 1363
|||||||||||||||||||||||||||||||||| | ||||||||||||| || ||||||
Sbjct 1493 GGAGGATCATGAAGCTAGGAAATTGCCAAAACACTC-TGGAACGAGAAAGTTATCATCTA 1551
Query 1364 GGCATAAGAGACATGAGAACAAGCTTGCAGAAAAGGCTCCTGAAGAGCCAAAGAAAGAGA 1423
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct 1552 GGCATAAGAGACATGAGAACAAGCTTGCTGAAAAGGCTCCTGAAGAGCCAAAGATTGAGA 1611
Query 1424 AATCGAGACATGTTGAAATGGGCACCAATTTACCTGATCATGGTGGGATAGTGAAACACA 1483
|||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||
Sbjct 1612 AATCGAGACATGTTGAGATGGGCAACGATTTACCTGATCATGGTGGGATAGTGAAACACA 1671
Query 1484 GAAATCTGCTTAGACCACAAGAAAATAAGCTCTTTACTGAAAAGCCTGCAAAACAAAAGA 1543
|||||||||| | |||| ||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 1672 GAAATCTGCTCAAACCAGAAGAAAACAAGCTCTTTACTGAAAAGCCTGCGAAACAAAAGA 1731
Query 1544 AGGAATTGCACTGTGAAGAGAAAACAAAAGGCATACAAAATCAACAATCGGATAGAATAC 1603
||||||||| ||||||||||||||||||| |||| ||||||||||| | ||||| || |
Sbjct 1732 AGGAATTGCTCTGTGAAGAGAAAACAAAACGCATTCAAAATCAACAGTTGGATAAAAAAA 1791
Query 1604 CACATCGGCAAGCAGTTGAAAAGAACCAGGAATTTGTGTATGATTGGGAACAAAATGCGA 1663
|||||| | |||||| ||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 1792 CACATCAGAAAGCAGCTGAAACGAACCAGGAATGCGTGTATGATTGGGAACAAAATGCGA 1851
Query 1664 GAAAGCTCAGGGAAGCTCTTGGTAATGAAAGTACGCTAGAGGTTTCC-TTGGAATTGAAT 1722
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 1852 GAAAGCTCAGGGAAGCTCTTGGTAATGAAAGTACGCTAGAGGTTTCCGTTG-AATTGAAT 1910
Query 1723 GGAAATGGTAAAAAATTGGGAATGTGTGGCGAAAGTGAGACAAAACTGAATGAGGCCTTG 1782
||||||||||||||| ||| |||| || || |||||||||| |||||||||||| |||||
Sbjct 1911 GGAAATGGTAAAAAAATGGAAATGCGTAGCCAAAGTGAGACTAAACTGAATGAGCCCTTG 1970
Query 1783 AAGCGGATGGAGGAGGAAACTAGGACTaaagaggctcgtgtaaaggaagaaaatgagaga 1842
||| ||||||||||||||||||||| ||||||||||||| ||| |||||||||||| |||
Sbjct 1971 AAGAGGATGGAGGAGGAAACTAGGATTAAAGAGGCTCGTCTAAGGGAAGAAAATGACAGA 2030
Query 1843 agagaaagagaagcttttgagaaggcagaaaatgagaaaagactgaagGCCGCATTGGAG 1902
|||||||||| |||| |||||||||||||||||||||||||||| ||||| || ||||||
Sbjct 2031 AGAGAAAGAGTAGCTGTTGAGAAGGCAGAAAATGAGAAAAGACTAAAGGCTGCGTTGGAG 2090
Query 1903 CAAGAAGAGAAGGAAAGAAAGAGTAAGGAAGCTCGTGAAAAAGCAGAGAATGAACGGAGA 1962
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 2091 CAAGAAGAGAAGGAAAGAAAGATTAAGGAAGCTCGTGAAAAAGCAGAGAATGAACGAAGA 2150
Query 1963 GCGGTAGAGGCTCGTGAAAAGGCAGAACAAGAAAGGAAAATGAAAGAACAACAAGAGTTA 2022
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2151 GCTGTTGAGGCTCGTGAAAAGGCAGAACAAGAAAGGAAAATGAAAGAACAACAAGAGTTA 2210
Query 2023 GAATTGCGGCTAAAAGAAGCTTTTGAAAAGGAAGAAAAGAACCGTAGAATGAGAGAGGCC 2082
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2211 GAATTGCAGCTAAAAGAAGCTTTTGAAAAGGAAGAAGAGAACCGTAGAATGAGAGAGGCC 2270
Score = 1916 bits (1037), Expect = 0.0
Identities = 1421/1593 (89%), Gaps = 79/1593 (5%)
Strand=Plus/Plus
Query 2325 agagaatgagaggA-AGTTGAAAGAAGCCCTCGAGCa-aaaggagaaagaaaggaggctg 2382
||| |||||||||| || | ||||| | || ||||| | ||||| || |||| | ||
Sbjct 2441 AGAAAATGAGAGGAGAGCT-AAAGAGGTTCTTGAGCAGGCA-GAGAATGAGAGGAAGTTG 2498
Query 2383 aaag-agacacgt-ga-aaaagaggagaatgagaagaa-gctgaaagaag-cta-ttgag 2436
|||| || | | | || ||| ||||||| || ||||| |||||||| || | | |||
Sbjct 2499 AAAGAAG-C-CCTCGAGCAAA-AGGAGAACGA-AAGAAGGCTGAAAG-AGAC-ACGTGAA 2552
Query 2437 ctagaagag-a-aagaaaaaaggctcatagaagctTTTGAGAGGGCAGAGATTGAGAGAA 2494
||| ||| | ||||| ||| || | ||||||| ||||| | ||||| || | ||
Sbjct 2553 AAAGAGGAGAATAAGAAGAAA--CTGAGAGAAGCTATTGAGCTAGAAGAGAAAGAAAAAA 2610
Query 2495 GACTGAAAGAGGATCTTGAACa-ggaagaga-tgaggatg-aggctgcaagaag-ccaag 2550
|||||| ||| | | ||| | | || ||||| ||| || | || ||| |||| | |
Sbjct 2611 GACTGATAGAAGCTTTTG-AGAGGGCAGAGATTGA-GA-GAAGACTGAAAGAGGATC-TT 2666
Query 2551 gaa-agagaaga-aaga-gaagaaag-ag-aagaaagagaa-gaaagagaaagactacat 2604
||| || ||||| | || || | | | | ||| ||| || ||||||||||||||||||
Sbjct 2667 GAACAG-GAAGAGATGAGGATG-AGGCTGCAAG-AAGCCAAGGAAAGAGAAAGACTACAT 2723
Query 2605 agagaaaatcaagagcatcaggaaaatgaaagaaaTCAACATGAATATTCAGGAGAAGAA 2664
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2724 AGAGAAAATCAAGAGCATCAGGAAAATGAAAGAAAACAACATGAATATTCAGGAGAAGAA 2783
Query 2665 AGTGACGAGAAAGAAAGAGATGCTTGTGAAATGGAGAAAACCTGTGAAACCACCAAAGAG 2724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2784 AGTGACGAGAAAGAAAGAGATGCTTGTGAAATGGAGAAAACCTGTGAAACCACCAAAGAG 2843
Query 2725 GCTCATGGAGAGCAATCATCAAATGAAAGTCTTAGCGACACTCTAGAAGAGGATGAGAGT 2784
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2844 GCTCATGGAGAGCAATCATCAAATGAAAGTCTTAGCGACACTCTAGAAGAGAATGAGAGT 2903
Query 2785 ACAGACAACCACAAATCTA-TGAACAAAC--AA-AACGAAGAAGAA-GGACCAAGGCAGA 2839
| ||||||| || ||| | ||||||||| || || ||||||||| ||| |||||||||
Sbjct 2904 ATAGACAACGACGTATC-AGTGAACAAACAAAAGAAAGAAGAAGAAGGGA-CAAGGCAGA 2961
Query 2840 GAGAATCTATGTCCGAAGAAACCTGTCCTTGGAAGGTTTTTGAGAAGAACCTCAAAGACG 2899
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2962 GAGAATCTATGTCCGCAGAAACCTGTCCTTGGAAGGTTTTTGAGAAGACCCTCAAAGACG 3021
Query 2900 CCAGCCAAAAGGAAGGAACTAATGAGCTGGATGCTGA-ATCCAGGTTGTTTGAGAGGAAT 2958
|||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||
Sbjct 3022 CCAGCCAAAAGGAAGGAACTAATGAGATGGATGCTGACA-CCAGGTTGTTTGAGAGGAAT 3080
Query 2959 GAAGAGACACCTCAGCTGGGTGAAAATGGAGGATATAACCAACGAAATGGAGTATCGA-G 3017
||||||||||| | ||||||||| |||||||||| |||||||| |||||||| ||| | |
Sbjct 3081 GAAGAGACACCACGGCTGGGTGAGAATGGAGGATGTAACCAACAAAATGGAGAATC-AGG 3139
Query 3018 TGAGGAGTCCACTTCTGTCACTGAGAATATTATAGGAGGAAAGCTCCAACAGAAGAGTAA 3077
|||||| ||||| |||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 3140 TGAGGAATCCACATCTGTCACTGAGAATATTATAGGAGGGAAGCTCGAACAGAAGAGTAA 3199
Query 3078 AAATTCTGAAACCTCCAAAGATGCCTCAGTTCTCAAACGAGACAATGGGTTGAAAACTGA 3137
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 3200 AAATTCTGAAACCTCCAAAGATGCCTCAGTTCTCAAACGAGTCAGTGGGTTGAAAACTGA 3259
Query 3138 AGTTGAAGAAAGATCAGAAGACGATGTAGGTGAAGACCAAAATGTCAGAAAAGCAGGTGT 3197
|||| || |||| | ||| || ||||| | || | ||||||
Sbjct 3260 AGTT-------GA--AGAA-A-GAT-TA---GAAGA-C-----GT------TGTAGGTGT 3292
Query 3198 TGGTCGTGATCAAAGGAATCCAGAGGAAAGTAAGTCCGCTCCCAAAACATCCTCTGGTTT 3257
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3293 TGGTCGTGATCAAAGGAATCCAGAGGAAAGTAAGTCCGCTCCCAAAACATCCTATGGTTT 3352
Query 3258 CAGAAACCATGAAAATAAATTCACCCATCAGCAGGAAAGAGGAAATATCTATGAGACCCA 3317
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3353 CAGAAACCATGAATATAAATTCACCCATCAGCAGGAAAGAGGAAATATCTATGAGACGCA 3412
Query 3318 AGCAGGTTTAAATCAAGATGCAAAATTAGAAAGACCATTGCCTTCTCGAGTATCCGTGCA 3377
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 3413 AGCAGGTTTAAATCAAGATGCAAAAGTAGAAAGACCATTGCCTTCTCGAGTATCTGTGCA 3472
Query 3378 ACGTgagaaagaagcagagagactaaagagagaaagagacttagagatggagcaattaag 3437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3473 ACGTGAGAAAGAAGCAGAGAGACTAAAGAGAGAAAGAGACTTAGAGATGGAGCAATTAAG 3532
Query 3438 aaaggtagaagaagaaagggagagggaaagagagagggagaaggaTCGAATGGCTTTTGA 3497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3533 AAAGGTAGAAGAAGAAAGGGAGAGGGAAAGAGAGAGGGAGAAGGATCGAATGGCTTTTGA 3592
Query 3498 CCAGAGAGCATTGGCTGATGCACGTGAAAGATTGGAGAAAGCATGTGCTGAGGCCAGAGA 3557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3593 CCAGAGAGCATTGGCTGATGCACGTGAAAGATTGGAGAAAGCATGTGCTGAGGCCAGAGA 3652
Query 3558 GAAGTCTTTGCCTGATAAGTTATCGATGGAGGCAAGACTTAGAGCAGAACGGGCAGCAGT 3617
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3653 GAAGTCTTTGCCTGATAAGTTATCGATGGAGGCTCGACTTAGAGCAGAACGGGCAGCAGT 3712
Query 3618 GGAGAGAGCAAC-TGCTGAAGCTCGTGAACGTGCAGCTGAAAAGGCTGCCTTTGAGGCAA 3676
|||||||||||| | ||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 3713 GGAGAGAGCAACCT-CTGAAGCTCGTGACCGTGCAGCTGAAAAGGCTGCTTTTGAGGCAA 3771
Query 3677 GAGAGCGAATGGAAAGATCGGTTTCCGATAAGCAATGTCAGAGTTCAGGTTTCTTTGGTG 3736
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3772 GAGAGCGAATGGAAAGATCGGTTTCCGATAAGCAATCTCAGAGTTCAGGTTTCTTTGGTG 3831
Query 3737 AACGAATGGAAAGATCAGTTTCTGATAAGCAATTTCAAAATTCACTCTCTTTTGGTGCTT 3796
|||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 3832 AACGAATGGAAATATCACTTTCTGATAAGCAATTTCAAAATTCAGTCTCTTTTGGTGCTT 3891
Query 3797 CAAGATATCAAAATTTT-ACTGGTACTGAAGGTGAATCGCCTCAAAGGTATACATCGAGA 3855
||||||||||| ||| | | |||||||||||||||||||||||||||||||||||| |||
Sbjct 3892 CAAGATATCAAGATTCTCA-TGGTACTGAAGGTGAATCGCCTCAAAGGTATACATCAAGA 3950
Query 3856 TTGGAAAGGCATCGAAGAACAGCTGATCGTGTG 3888
|| |||||||||| |||||| ||||||||||||
Sbjct 3951 TTAGAAAGGCATCAAAGAACGGCTGATCGTGTG 3983
Score = 972 bits (526), Expect = 0.0
Identities = 614/656 (94%), Gaps = 8/656 (1%)
Strand=Plus/Plus
Query 1 ATGGAAAATCTCTCTCATTCTCGGAATCCAAATAGG---TCTTCACTATCTAAGAAACCT 57
|||||||||||||||||||||||||||||||| ||| |||||| || |||||||||||
Sbjct 84 ATGGAAAATCTCTCTCATTCTCGGAATCCAAACAGGTCTTCTTCATTACCTAAGAAACCT 143
Query 58 TACAATGGCGGCAATAACGCCGGAGGTTTTAGCTACAACTCCGGCAAAACGGCTAATACA 117
||||||||| || | | |||||||||||||||||||||||||||||||||||||||||
Sbjct 144 TACAATGGCAATAACACCACCGGAGGTTTTAGCTACAACTCCGGCAAAACGGCTAATACA 203
Query 118 ACCACCACCACTACATACGACAACGTTTTTGGTGGCCCGCCTAGGTTCGGAGCTCCGACG 177
|||||||| |||||||||||| ||||||||||||| || ||||||||||||||||||||
Sbjct 204 ACCACCACTACTACATACGACGACGTTTTTGGTGGTCCACCTAGGTTCGGAGCTCCGACT 263
Query 178 TTGTCTCCTCGTCTCGAAGACTACTGCGAGATTTTCGCCGGATTCAACGGCTCCTCACGC 237
|| |||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||
Sbjct 264 TTATCTCCTCGTCTCGAAGACTATTGCGAGATTTTCTCCGGTTTCAACGGCTCCTCACGC 323
Query 238 GCCGCCGTTTCCTCGATTCCGGTGCTCGATCTTCCACTAGTTGATGACAGAGATGTCTAC 297
||||||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct 324 GCCGCCGTTTCTTCGATTCCGGTACTCGATCTTCCACTTGTTGATGATAGAGATGTCTAC 383
Query 298 TTCGATGTTCGGAGTCATGGTTTTGACTACCGTGAAGTCTTCGGAGGTTTTAACGATCTC 357
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 384 TTCGATGTTCGGAGTCAAGGTTTTGACTACCGTGAAGTCTTCGGAGGGTTTAACGATCTC 443
Query 358 GATTTAGCTCCGTCGTATGAAGAACTGTTTTTGCAGCAGCGGTCT-C--CGGTGGTTGGT 414
||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||
Sbjct 444 GATTTAGCTCCGTCGTATGAAGAACTGTTTTTGCAGCAGAAGTCTACTACGGTGGTTGGT 503
Query 415 GATGGTGATTCCTCCGACGATGCTTGGACTCCCGAAGAAGTAGAGTCATGCTCAGGTGGT 474
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 504 GATGGTGATTCCTCCGACGATGCTTGGACTCCTGAGGAAGTAGAGTCATGCTCAGGTGGT 563
Query 475 ACAGAACATTCTGGCAAAAGTCCTTGTTTTTCTAATGGTAGAGATTCATATGATTCCATT 534
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 564 ACAGAACATTCTGGCAAAAGTCCTTGCTTTTCTAATGGTAGAGACTCATATGATTCCATT 623
Query 535 GATGGAAGTACAGAGTTCAACATTTCCTATAACAAAGCTAGCCAGATAAGCGGCGGCGAC 594
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||
Sbjct 624 GATGGAAGTACAGAGTTCAACATTTCTTATAACAAAGCTAGTCAGATAAGCGGCGGTGAG 683
Query 595 ACAAATATGTCCTCAAGTGGTGTGATACGTG-AGGCTGATCTTGGTGCTATTCCTG 649
||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 684 ACAAATATGTCCTCAAGTGGTGTGATACGTGTAG-CTGATCTTGGTGCTATTCCTG 738
Score = 730 bits (395), Expect = 0.0
Identities = 427/443 (96%), Gaps = 0/443 (0%)
Strand=Plus/Plus
Query 2117 TTGCACTTgaacaagagaaggaacgaagaataaaagaagctcgtgaaaaggaagaaaatg 2176
|||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| |
Sbjct 2272 TTGCACTTGAACAAGAGAAGGAACGAAGGATAAAAGAAGCACGTGAAAAAGAAGAAAACG 2331
Query 2177 agcgaagaataaaagaGGCTCGTGAGAAGGCAGAGCTGGAGCAAAGACTGAAAGCAACTC 2236
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2332 AGCGAAGAATAAAGGAGGCACGTGAGAAGGCAGAGCTGGAGCAAAGACTGAAAGCAACTC 2391
Query 2237 TTGAACaagaagagaaggaaaggcagattaaagagtgtcaagagagagaagaaaatgaga 2296
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 2392 TTGAACAAGAAGAGAAGGAAAGGCAGATTAAAGAAAGACAAGAGAGAGAAGAAAATGAGA 2451
Query 2297 ggagagctaaagaggttcttgagcaggcagagaatgagaggAAGTTGAAAGAAGCCCTCG 2356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2452 GGAGAGCTAAAGAGGTTCTTGAGCAGGCAGAGAATGAGAGGAAGTTGAAAGAAGCCCTCG 2511
Query 2357 AGCaaaaggagaaagaaaggaggctgaaagagacacgtgaaaaagaggagaatgagaaga 2416
||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 2512 AGCAAAAGGAGAACGAAAGAAGGCTGAAAGAGACACGTGAAAAAGAGGAGAATAAGAAGA 2571
Query 2417 agctgaaagaagctattgagctagaagagaaagaaaaaaggctcatagaagctTTTGAGA 2476
| |||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 2572 AACTGAGAGAAGCTATTGAGCTAGAAGAGAAAGAAAAAAGACTGATAGAAGCTTTTGAGA 2631
Query 2477 GGGCAGAGATTGAGAGAAGACTGAAAGAGGATCTTGAACaggaagagatgaggatgaggc 2536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2632 GGGCAGAGATTGAGAGAAGACTGAAAGAGGATCTTGAACAGGAAGAGATGAGGATGAGGC 2691
Query 2537 tgcaagaagccaaggaaagagaa 2559
|||||||||||||||||||||||
Sbjct 2692 TGCAAGAAGCCAAGGAAAGAGAA 2714
Score = 473 bits (256), Expect = 5e-132
Identities = 283/296 (96%), Gaps = 2/296 (1%)
Strand=Plus/Plus
Query 3889 AGAATCGCTGAAACCTTAGATACCGAAGTAAAGAGATGGTCAAGTGGAAAAGAAGGGAAC 3948
||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct 4050 AGAATTGCTGAAACCTTAGACACCGAAGTAAAAAGATGGTCGAGTGGAAAAGAAGGAAAC 4109
Query 3949 ATAAGAGCATTACTCTCAACACTACAATACATCCTCGGTCCCGAAG-GCGGATGGCAACC 4007
||||||||||||||||||||||||||||| || |||||||||| || |||| ||||||||
Sbjct 4110 ATAAGAGCATTACTCTCAACACTACAATATATTCTCGGTCCCG-AGAGCGGTTGGCAACC 4168
Query 4008 GTTACCATTAACAGAAGTCATAACTTCAGCAGCCGTGAAGCGAGCTTACAGGAAAGCAAC 4067
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 4169 GTTACCGTTAACAGAAGTGATAACTTCAGCAGCCGTGAAGCGAGCTTACAGGAAAGCTAC 4228
Query 4068 ACTTTGTGTTCATCCAGACAAGTTACAGCAAAGAGGTGCAAACATTCATCAGAAATATAT 4127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4229 ACTTTGTGTTCATCCAGACAAGTTACAGCAAAGAGGTGCAAACATTCATCAGAAATATAT 4288
Query 4128 CTGCGAAAAGGTCTTCGATCTTCTTAAGGAAGCTTGGAACAGATTCAACTCAGAAG 4183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4289 CTGCGAAAAGGTCTTCGATCTTCTTAAGGAAGCTTGGAACAGATTCAACTCAGAAG 4344
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 208895150652
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5