BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg328154 Length=573 Score E Sequences producing significant alignments: (Bits) Value AT4G36000.1 | Symbols: | Pathogenesis-related thaumatin superf... 510 5e-144 > AT4G36000.1 | Symbols: | Pathogenesis-related thaumatin superfamily protein | chr4:17037583-17038713 REVERSE LENGTH=1043 Length=1043 Score = 510 bits (276), Expect = 5e-144 Identities = 325/349 (93%), Gaps = 2/349 (1%) Strand=Plus/Plus Query 219 AGACTTTTATGATGTCAGCCTCGTTGATGGCTATAACCTCCCCATGATCGTGGAGGGTTC 278 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 491 AGACTTTTATGATGTCAGCCTTGTTGATGGCTATAACCTCCCCATGATCGTGGAGGGTTC 550 Query 279 TGGTTTGTGCCCCACCACAGGGTGTGTCACGGACTTAAACCAGAATTGCCCAACAAAGCT 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 551 TGGTTTGTGCCCCACCACAGGGTGTGTCACGGACTTAAACCAGAATTGCCCAACGGAGCT 610 Query 339 AAAAGCCAAGAGCG-GTTTGGCATGTAGAAGTGCGTGTGAGGCGTTTGGAACCCCAGAGT 397 ||||||||||| | ||||||| |||||||||||||||||||||||||||| || || | Sbjct 611 CAAAGCCAAGAG-GAGTTTGGCTTGTAGAAGTGCGTGTGAGGCGTTTGGAAGACCGGAAT 669 Query 398 ATTGCTGCAGTGGCGCATACGGTTCACCTGGTACCTGCAAGCCGTCGATATATTCTCAAG 457 |||||||||||||||||||||||||||| | || ||||||||||||||| || || |||| Sbjct 670 ATTGCTGCAGTGGCGCATACGGTTCACCAGATAGCTGCAAGCCGTCGATGTACTCACAAG 729 Query 458 TCTTTAAATCAGCTTGTCCTAAATCGTACAGCTACGCGTACGATGATGCCACAAGTACTT 517 | ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 730 TTTTTAAGTCAGCTTGTCCTAAATCGTACAGTTACGCGTATGATGATGCCACAAGTACTT 789 Query 518 TCACTTGTAGTGATGCTGATTACACCATCACTTTCTGTCCCAACTTGTC 566 |||||||||||| ||||||||||||||||||||| |||||||| ||||| Sbjct 790 TCACTTGTAGTGGTGCTGATTACACCATCACTTTTTGTCCCAAATTGTC 838 Score = 230 bits (124), Expect = 1e-59 Identities = 140/148 (95%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 73 GGTGTCAAGTGTACAACGTTCACGCTCGTTAACAAATGCGATTTCCCGGTGTGGCCAGGG 132 ||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct 174 GGTGTTAAGTGTACAACGTTCACGCTAGTTAACAAATGCGATTTCCCAGTGTGGCCAGGG 233 Query 133 ATTTTATCCGGTTCAGGTAGTCCCAAACTTGATACCACCGGATTCGAGCTCTCCAAAGAT 192 ||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||| Sbjct 234 ATTTTATCCGGTTCAGGTAGTCCCAAACTCGATTCCACTGGATTCGAGCTCTCCAAAGAT 293 Query 193 ACCTCTCGCACTTTTCGAGCACCCGCAG 220 |||||||||||||| |||||||| |||| Sbjct 294 ACCTCTCGCACTTTCCGAGCACCTGCAG 321 Score = 117 bits (63), Expect = 1e-25 Identities = 71/75 (95%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 1 ATGGCTCTGTCCCGTCTCCATCTCCCACCTTACGCCTCTGTTCTTGGATTTATCCTCTTG 60 |||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1 ATGGCTCTGTTCAGTCTCCATCTCCCACGTTACGCCTCTGTTCTTGGATTTATCCTCTTG 60 Query 61 TTGCTCCGTGATGGT 75 |||||||||||||| Sbjct 61 CTGCTCCGTGATGGT 75 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27528312556 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5