BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg328161
Length=1380
Score E
Sequences producing significant alignments: (Bits) Value
AT4G35910.1 | Symbols: | Adenine nucleotide alpha hydrolases-l... 2141 0.0
> AT4G35910.1 | Symbols: | Adenine nucleotide alpha hydrolases-like
superfamily protein | chr4:17008567-17011509 REVERSE LENGTH=1852
Length=1852
Score = 2141 bits (1159), Expect = 0.0
Identities = 1308/1381 (95%), Gaps = 5/1381 (0%)
Strand=Plus/Plus
Query 1 ATGGCTTGTAATTCCTCAGGCTGTGAGTCGGGTTGCTATGACCGTGAGAAAGATAATGGA 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 226 ATGGCTTGTAATTCCTCAGGCTGTGAGTCAGGTTGCTATGACCGTGAGAAAGATAATGGA 285
Query 61 AGTAAAATATCCGTGGAAGATGCAGTAGCTGGTGGCGGTAATCAGGAGAGTGTCTGCGTC 120
||||| ||| ||||| ||||||||| |||||||||||||||| |||||||||||||||
Sbjct 286 AGTAAGATA---GTGGATGATGCAGTATCTGGTGGCGGTAATCATGAGAGTGTCTGCGTC 342
Query 121 AAGTGTAAATGCAATGAGCCTATGACATTTGGGGATGGTGGC-TCGGAAGACGGAAGATT 179
|||||||||||||||| ||||||||||||||| || |||||| || || || ||||||||
Sbjct 343 AAGTGTAAATGCAATGCGCCTATGACATTTGGTGACGGTGGCTTC-GACGATGGAAGATT 401
Query 180 CTGTGCAGAGTGTTTTAGGAACAATGTCTTTGGGAAGTTCCGTCTCGCTGTTACTTCCCA 239
||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct 402 CTGCGCAGATTGTTTTAGGAACAATGTCTTTGGGAAATTCCGTCTTGCTGTTACTTCTCA 461
Query 240 TGCCATGATCACTCCTTCAGATAACGTCCTTGTTGCTTTCTCTGGCGGATCATCTTCCAG 299
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 462 TGCTATGATCACTCCTTCAGATAACGTCCTTGTTGCTTTCTCTGGCGGATCATCTTCCAG 521
Query 300 GGTTGCTCTTCAATTTGTCCACGAGTTGCAAATCAAGGCTTTGAAGAATTACGAGGCGAG 359
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 522 GGTTTCTCTTCAATTTGTGCACGAGTTGCAAATCAAGGCTTTGAAGAATTACGAGGCGAG 581
Query 360 TCGAGATAGATCTTTACCTGTGTTTGGTGTTGGTGTTGCGTTTGTGGATGAAACTGCAGC 419
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 582 TCGAGATAGATCTTTACCTGTGTTTGGTGTTGGTGTTGCTTTTGTGGATGAAACTGCAGC 641
Query 420 TTTTCCTGCTCTTTCCACTGAAATGGTTGATGCGAGTGAGTGGATTCGATCTACTGTCTC 479
||||||||||||||||||||||||| ||||||| | ||||||| |||||| |||||||||
Sbjct 642 TTTTCCTGCTCTTTCCACTGAAATGATTGATGCAATTGAGTGGGTTCGATATACTGTCTC 701
Query 480 GAGTTTGTCTCCACCTGCAAAGGATGTCCATGTTGTTCCAGTCGAAAGCGTCTTTGGTTC 539
| |||||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||
Sbjct 702 GTGTTTGTCTCCACCTGCTAAGGATCTCCATGTTGTTCCAGTCGAAAGCATATTTGGTTC 761
Query 540 AGACTCTCTTGACGCGCGGGATAGGCTGGTAAAGCTATTAGATTCTGTTCCTGACGATAC 599
||||||||||||||| |||||||| || | |||||||||||||||||||||||||||||
Sbjct 762 AGACTCTCTTGACGCACGGGATAGACTTCTGAAGCTATTAGATTCTGTTCCTGACGATAC 821
Query 600 TGGAAAAGAAGACCTTCTGCTGCATCTGAAAATGTTGTCTTTGCAAAAGGTTGCCTCTGA 659
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 822 TGGAAAAGAAGACCTTCTGCTGCATCTGAAAATGTTATCTTTGCAAAAGGTTGCCGCTGA 881
Query 660 AAATGGGTACAACAGATTAGTGGTGGGATCATGCACGTCGAGAATTGCTTCCCATGTTCT 719
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 882 AAATGGGTACAATAGATTAGTGTTGGGATCATGCACGTCGAGAATTGCTTCCCATGTTCT 941
Query 720 TTCGGCTACTGTCAAGGGACGGGGTTATTCACTATCAGCAGATATTCAGCATGTGGATGC 779
| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 942 TACGGCTACTGTCAAGGGACGAGGTTATTCACTATCAGCAGATATTCAGCATGTTGATGC 1001
Query 780 GAGATGGAAGGTCCCCATTGTACTTCCACTTCGAGATTGTGTCCGACTGGAAATAACTAG 839
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1002 TAGATGGAAGGTTCCCATTGTACTTCCACTTCGAGATTGTGTTCGACTGGAAATAACTAG 1061
Query 840 ACTCTGCCATTTGGATGGTCTAAAGACTGTGGAGTTGGCTTGTCGTTCTCAATGCGGCAT 899
|||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| ||
Sbjct 1062 ACTCTGCCTTTTGGATGGACTTAAGACTGTGGAGTTGGCTTGTCGTTCTCAATGCGGAAT 1121
Query 900 CAATGATTTGGTGTCTTCATTTGTCGCTCTGTTGCAGGAAGAAAATCCTTCTCGGGAATG 959
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1122 CAATGATTTGGTGTCTTCATTTGTCGCTCTGTTGCAGGAAGAAAATCCTTCCCGGGAATG 1181
Query 960 CACAATTGTACGGACAGCCGCAAAGCTGACTCCATTTTACTTCAACAAAATTCCGGAAAC 1019
|||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct 1182 CACAATTGTACGGACAGCTGCGAAGCTGACTCCATTTTACTTCAATAAAATTCCGGAAAC 1241
Query 1020 AGATGACTCGAATGTTCCTATGGCCACTCAGAGGCGCCTAAAGAGATTCAATCTCAAATA 1079
||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1242 AGACGACTCTAATGTACCTATGGCCACTCAGAGGCGCCTAAAGAGATTCAATCTCAAATA 1301
Query 1080 TGATGGATCGATGACTACTGAAGCTTTCTGTCCTATCTGCAATGGCCCGCTAAATAGATC 1139
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1302 TGATGGATCAATGACTACTGAAGCTTTCTGTCCTATCTGCAATGGCCCGCTAAATAGATC 1361
Query 1140 AGACTCATCAGATTTGGATACTTTTGAAGAAGGCCAGGAAGCTGATGTCCTTTATGCTGC 1199
|||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct 1362 AGACTCATCAGAGTTGGATACTTTTGAAGAAGGCCAGGAATCTGATGTCCTCTATGCTGC 1421
Query 1200 TTGCTGTTCAAGTTGCCGGTTTCAAATACTTCCAGAAGATGGATCATCTCTTGAGCAATT 1259
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 1422 TTGCTGTTCAAGTTGCCGGTTTCAAATACTTCCACAGGATGGATCATCTCTTGAGCAATT 1481
Query 1260 TAGTTCATTTCTACCAGATCACATGATTTCCCAAGTGAAGCATCAAAAGGTTGACAGTCA 1319
|||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct 1482 CAGTTCATTTCTACCAGATCACATGATTTCCCAAGTGAAACATCAAAAAGTTGATAGTCA 1541
Query 1320 AGCGCATCTGAGGGAGAAAATAAAAGACTGTCTGCTCTTGGACGATGAAGAGGTTGTCTA 1379
||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1542 AGCTTATCTGAGGGAGAAAATTAAAGACTGTCTGCTCTTGGACGATGAAGAGGTTGTCTA 1601
Query 1380 A 1380
|
Sbjct 1602 A 1602
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67971537930
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5