BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg328172
Length=873
Score E
Sequences producing significant alignments: (Bits) Value
AT4G35810.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 1375 0.0
AT2G17720.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 765 0.0
> AT4G35810.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr4:16968921-16970358
FORWARD LENGTH=873
Length=873
Score = 1375 bits (744), Expect = 0.0
Identities = 831/874 (95%), Gaps = 2/874 (0%)
Strand=Plus/Plus
Query 1 ATGGCGAAGAAACCGAAACACCTCCGTAATC-AGCCGCGTAAATCTTTTTCGACGCAAGC 59
||||||||||||||||| || |||||||| | |||||||||||||||||||||||||| |
Sbjct 1 ATGGCGAAGAAACCGAAGCAGCTCCGTAA-CAAGCCGCGTAAATCTTTTTCGACGCAAAC 59
Query 60 TTTCACAGTTCTCATACTTGGACTCTTTGTCATTTTGATCCTTGTCGGTCTCGGAATCCT 119
|||||||||| || |||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 60 TTTCACAGTTGTCGTACTTGTACTCTTTGTCATTTTGATCCTTGTCGGTCTCGGAATCTT 119
Query 120 TTCACTACCTAACACCAACAAGAGCTCTTCTAGGCCGATGGATTTGACCACCATTGTACA 179
||||||||| | ||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 120 TTCACTACCCAGCACCAACAAGACCTCTTCTATGCCGATGGATTTGACCACCATTGTACA 179
Query 180 AACGATCGAGGAGAGGGAGAGTTATGGAGACGAAGAAGACGGTAATGGTGACCGCTGGCT 239
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 180 AACGATCCAGGAGAGGGAGAGTTTTGGAGACGAAGAAGACGGTAATGGTGACCGCTGGCT 239
Query 240 CGAAGTTATCTCGTGGGAGCCTAGAGCTTTCGTTTATCACAATTTCTTGACCAATGAAGA 299
||||||||||| ||||||||||||||||| ||||| ||||| |||||||| ||||||||
Sbjct 240 GGAAGTTATCTCCTGGGAGCCTAGAGCTTTTGTTTACCACAACTTCTTGACAAATGAAGA 299
Query 300 ATGTGAGCACTTGATCAGTCTTGCTAAACCTAGTATGGTGAAATCAAAGGTGGTTGATGT 359
||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||||||
Sbjct 300 ATGTGAGCACTTGATTAGCCTTGCGAAACCTAGTATGATGAAATCAAAGGTGGTTGATGT 359
Query 360 GAAAACCGGAAAGAGCATAGACAGCAGAGTACGAACCAGTTCAGGAACTTTTCTTAAAAG 419
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 360 GAAAACCGGAAAGAGCATCGACAGCAGAGTACGAACCAGTTCAGGAACTTTTCTTAACAG 419
Query 420 AGGACATGACGAAATCGTGGAAGAGATTGAGAATAGGATTTCAGATTTCACCTTCATTCC 479
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 AGGACATGACGAAATAGTGGAAGAGATTGAGAATAGGATTTCAGATTTCACCTTCATTCC 479
Query 480 TATAGAAAATGGAGAAGGGCTACAAGTTCTCCATTATGAAGTTGGGCAGAAATATGAGCC 539
| |||||||||||| ||||| |||||||| ||||||||||||||||||| |||||||||
Sbjct 480 TCCAGAAAATGGAGAGGGGCTGCAAGTTCTTCATTATGAAGTTGGGCAGAGATATGAGCC 539
Query 540 TCACCATGACTATTTCTTCGATGAGTTCAATGTCAGGAAAGGAGGACAACGAATTGCTAC 599
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 540 TCACCATGACTATTTCTTTGATGAGTTCAATGTCAGGAAAGGAGGGCAACGAATTGCTAC 599
Query 600 AGTACTTATGTACCTCTCGGATGTTGATGAAGGCGGCGAAACAGTTTTCCCTGCAGCCAA 659
|||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 600 AGTACTAATGTACCTCTCGGATGTCGATGAAGGCGGAGAAACAGTTTTCCCTGCAGCCAA 659
Query 660 AGGAAACATTAGTGCTGTCCCATGGTGGGACGAGCTCTCACAATGTGGTAAAGAAGGACT 719
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 AGGAAACGTTAGTGATGTCCCATGGTGGGACGAGCTCTCACAATGTGGTAAAGAAGGACT 719
Query 720 CTCTGTTCTGCCAAAGAAGAGAGATGCTTTACTCTTCTGGAGCATGAAGCCTGACGCCTC 779
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 720 CTCTGTTCTGCCAAAGAAGAGAGACGCTTTACTCTTCTGGAGCATGAAGCCTGACGCGTC 779
Query 780 TCTAGACCCTTCTAGTTTGCATGGTGGTTGTCCAGTGATCAAAGGAAACAAGTGGTCATC 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 TCTAGACCCTTCTAGTTTGCATGGTGGTTGTCCAGTGATCAAAGGAAACAAGTGGTCATC 839
Query 840 AACTAAATGGTTTCACGTTCACGAGTACAATTGA 873
||||||||||||||||||||||||||||||||||
Sbjct 840 AACTAAATGGTTTCACGTTCACGAGTACAATTGA 873
> AT2G17720.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr2:7697336-7699568
FORWARD LENGTH=1339
Length=1339
Score = 765 bits (414), Expect = 0.0
Identities = 690/822 (84%), Gaps = 23/822 (3%)
Strand=Plus/Plus
Query 55 CAAGCTTTCACAGTTCTCATACTTGGACTCTTTGTCATTTTGATCCTTGTCGGTCTCGGA 114
||||||||||| || || |||||| ||| | || ||| |||| ||| | ||||||||
Sbjct 241 CAAGCTTTCACGGTGCTTATACTTCTTCTCGTAGTGATTCTGATTCTTCTGGGTCTCGGG 300
Query 115 ATCCTT-TCACTACCTAACACCAACAAG-AGCTCTTCTAGGCCG-ATGGATTTGACCACC 171
|| || ||||||||||| | || || | |||||| | | || || |||||||||| |
Sbjct 301 AT-TTTGTCACTACCTAATGCTAA-TAGAAACTCTTCCAAGACGAAT-GATTTGACCAAC 357
Query 172 ATTGTAC-AAACGATCGAGGAGAGGGAGAGTTATGGAGACGAAGAAGACGGTAATGGTGA 230
||||||| ||| || | |||| ||||| |||||| ||||||| || ||||||||
Sbjct 358 ATTGTACGAAA-GA--G-TGAGA---CGAGTTCTGGAGATGAAGAAG--GG-AATGGTGA 407
Query 231 CCGCTGGCTCGAAGTTATCTCGTGGGAGCCTAGAGCT-TTCGTTTATCACAATTTCTTGA 289
|| ||| | |||||||| || ||||||||| | ||| || |||||||||||||||||||
Sbjct 408 ACGTTGGGTTGAAGTTATTTCTTGGGAGCCTCGTGCTGTT-GTTTATCACAATTTCTTGA 466
Query 290 CCAATGAAGAATGTGAGCACTTGATCAGTCTTGCTAAACCTAGTATGGTGAAATCAAAGG 349
| |||||||||||||||||||||||||| ||||||||||| |||||||| || |||| |
Sbjct 467 CTAATGAAGAATGTGAGCACTTGATCAGCCTTGCTAAACCGAGTATGGTTAAGTCAACCG 526
Query 350 TGGTTGATGTGAAAACCGGAAAGAGCATAGACAGCAGAGT-ACGAACCAGTTCAGGAACT 408
|||| |||| ||||||||| ||||| ||| |||||||| | |||| || |||||||||
Sbjct 527 TGGTAGATGAGAAAACCGGTGGGAGCAAAGATAGCAGAGTGA-GAACTAGCTCAGGAACT 585
Query 409 TTTCTTAAAAGAGGACATGACGAAATCGTGGAAGAGATTGAGAATAGGATTTCAGATTTC 468
||||||| |||||||||||||||| | || || | ||||||||| |||||||||||||||
Sbjct 586 TTTCTTAGAAGAGGACATGACGAAGTTGTCGAGGTGATTGAGAAAAGGATTTCAGATTTC 645
Query 469 ACCTTCATTCCTATAGAAAATGGAGAAGGGCTACAAGTTCTCCATTATGAAGTTGGGCAG 528
|||||||||||| | |||||||| ||||| || |||||||| || || |||||||||||
Sbjct 646 ACCTTCATTCCTGTTGAAAATGGTGAAGGTCTTCAAGTTCTTCACTACCAAGTTGGGCAG 705
Query 529 AAATATGAGCCTCACCATGACTATTTCTTCGATGAGTTCAATGTCAGGAAAGGAGGACAA 588
|| |||||||||||| ||||||||||||| ||||||||||| || ||| |||||||||
Sbjct 706 AAGTATGAGCCTCACTATGACTATTTCTTAGATGAGTTCAACACCAAGAATGGAGGACAA 765
Query 589 CGAATTGCTACAGTACTTATGTACCTCTCGGATGTTGATGAAGGCGGCGAAACAGTTTTC 648
||||| ||||| || |||||||||||||| ||||| ||||| || ||||| || || |||
Sbjct 766 CGAATAGCTACTGTGCTTATGTACCTCTCTGATGTCGATGATGGTGGCGAGACTGTGTTC 825
Query 649 CCTGCAGCCAA-AGGAAACATTAGTGCTGTCCCATGGTGGGACGAGCTCTCACAATGTGG 707
||||||| ||| |||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 826 CCTGCAG-CAAGAGGAAACATTAGTGCTGTCCCATGGTGGAACGAGCTCTCAAAATGTGG 884
Query 708 TAAAGAAGGACTCTCTGTTCTGCCAAAGAAGAGAGATGCTTTACTCTTCTGGAGCATGAA 767
|||||||||||| |||||||| ||||||||| ||||||||||||| ||||||| |||||
Sbjct 885 TAAAGAAGGACTATCTGTTCTACCAAAGAAGCGAGATGCTTTACTTTTCTGGAACATGAG 944
Query 768 GCCTGACGCCTCTCTAGACCCTTCTAGTTTGCATGGTGGTTGTCCAGTGATCAAAGGAAA 827
|||||| || |||||||||||||| || ||||| ||||| ||||||||| | ||||||||
Sbjct 945 GCCTGATGCATCTCTAGACCCTTCGAGCTTGCACGGTGGATGTCCAGTGGTGAAAGGAAA 1004
Query 828 CAAGTGGTCATCAACTAAATGGTTTCACGTTCACGAGTACAA 869
||| |||||||| || |||||||| || || ||||||| |||
Sbjct 1005 CAAATGGTCATCCACGAAATGGTTCCATGTCCACGAGTTCAA 1046
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 42598556656
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5