BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg328182 Length=834 Score E Sequences producing significant alignments: (Bits) Value AT4G35700.1 | Symbols: | zinc finger (C2H2 type) family protei... 699 0.0 > AT4G35700.1 | Symbols: | zinc finger (C2H2 type) family protein | chr4:16923319-16924320 FORWARD LENGTH=1002 Length=1002 Score = 699 bits (378), Expect = 0.0 Identities = 700/851 (82%), Gaps = 40/851 (5%) Strand=Plus/Plus Query 1 ATGAGTAATCCCGAGAAGTCCAAAATTAATGAGGAAGACATTATTGAAAATTCTGACGAG 60 |||||||||||||||||||| |||||| ||||||||| | | ||| |||| ||||||| Sbjct 33 ATGAGTAATCCCGAGAAGTCTAAAATTGCTGAGGAAGAGA--A-TGAGAATTTTGACGAG 89 Query 61 AGTGATTATCTTTGGAGCGATGAAGAAGGAGAAATCCGTGAAATTGTTCTTGCCCTTCCT 120 |||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||| Sbjct 90 AGTGATTATCTTTGGAGCGATGAAGAAGGAGACATACGTGAAATTGTTCTTGGCCTTCCT 149 Query 121 GCACTGAGACTCAGTGAGAGTCTCCATGTGGACGAAACCATCCGTAACGAAGCCGCTGCC 180 ||||| ||||| |||||||||||| ||||||| |||| ||||||||||||||||| | || Sbjct 150 GCACTAAGACTTAGTGAGAGTCTCAATGTGGATGAAAGCATCCGTAACGAAGCCGTTTCC 209 Query 181 GCGGCGAATTTGATTGTGGCAGCCGTCGAA-GAAGCGGCGGGGAAGACAGATCAAATTGC 239 |||||||| ||||| |||||||||| | || ||||| | ||||| ||||| |||| ||| Sbjct 210 GCGGCGAAGTTGATCGTGGCAGCCG-CCAAGGAAGCCACAGGGAATACAGAACAAAGTGC 268 Query 240 AAGTGGTATTGGTAACGCTAGTGGGACTCCCA-ATAGT-aaaaaaaTTGGTAGGCCACGT 297 ||||||| ||| ||| |||||| ||| ||| | | | | |||| |||| | || ||| Sbjct 269 TAGTGGTACCGGTGACGTTAGTGGAACT-CCAGA-AATCATAAAAGTTGGGAAACCCCGT 326 Query 298 GTCTTATTGGAA--GCTGAAGCCGCAGCGTCTGGTTCTACCGCC-ATTGGGACGACAAGT 354 || ||||||||| |||| |||| ||| ||||||| |||| || |||||| ||| | | Sbjct 327 GTATTATTGGAAGCGCTG--GCCGAAGCATCTGGTTGTACC-CCTATTGGGGTGACCACT 383 Query 355 ACTGAAAGAGAGGTAGTGAAGAAACCCCGTAGGAAAGGTTCTACCCAGTTGACTCATCTA 414 |||||| |||||||||| ||||||||||||| |||||||||||| |||||||| ||||| Sbjct 384 ACTGAAGGAGAGGTAGTCAAGAAACCCCGTAAGAAAGGTTCTACTCAGTTGACACATCTG 443 Query 415 CCTCAAGGCCCTCCTATGTGTAATGTTTGTGGGAAGGGCTTTGCTTCTTGGAAGGCCGTT 474 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 444 CCGCAAGGCCCTCCTATGTGTAATGTTTGTGGGAAGGGCTTTGCTTCTTGGAAGGCTGTT 503 Query 475 TTTGGACATTTAAGGCAGCATAAAGATCGTGGTTATCTAGGTTTTCTTCCTCCGCCAACA 534 ||||||||| ||||||||||||| ||||| || ||||||||||||||||||||||||||| Sbjct 504 TTTGGACATCTAAGGCAGCATAAGGATCGAGGGTATCTAGGTTTTCTTCCTCCGCCAACA 563 Query 535 TTCAATGCGGCTGAGGAAGGATTTGGTGGAGTCGCTACTGTTTCTTCCGCTGTTGGAGTC 594 |||||||| ||||||||||||||||||||||| ||||||| ||| ||| || || ||| Sbjct 564 TTCAATGCTGCTGAGGAAGGATTTGGTGGAGTTGCTACTGCTTCAACCGGTGGTGCAGTA 623 Query 595 GCTACTGCT-TCTTCCGCTGTTGGAGTCGCC-ATTGCTTCCTCCGGTGGCGGAGTCGCTA 652 || |||||| | ||||| || || |||| || | |||||| |||| ||| ||| |||||| Sbjct 624 GCCACTGCTAT-TTCCGTTGGTGAAGTC-CCTACTGCTTCTTCCGCTGGTGGACTCGCTA 681 Query 653 CAGCTTGTGCCGCTGGTGGAGTCGCTACATCTTCTTCCGCCGGCACCGGAGCTGTGGGGA 712 | |||| | ||| ||||| || ||| | ||| ||| | || || | || | Sbjct 682 CGGCTTCTTCCGATGGTGAAGG-GCTTG-T-TTCAAGTATCGGAA--GG-GC-GAGG--A 732 Query 713 TCGATCTGAACAAA--GATCCCA-TCGAGGAGGAAGACAAGGCACCTGGACCT--A---A 764 | || || || | ||||| | |||||||||||||||||| | |||| | | | Sbjct 733 TTGA-CTTAA-ATGCCGATCC-AGTCGAGGAGGAAGACAAGGTAATTGGAGTTGGATCTA 789 Query 765 A-CGAAAATTTGATCTTAATAGGTCTCCTCCACAAGACGATGAAGAAGAGAAGGACGAGA 823 | |||||||||||||| |||||||| || |||| ||||| ||| |||||||| || || | Sbjct 790 AGCGAAAATTTGATCTGAATAGGTCCCCCCCACCAGACGGTGATGAAGAGAACGATGATA 849 Query 824 AAGCCGAGTGA 834 ||| ||||||| Sbjct 850 AAGTCGAGTGA 860 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40639424923 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5