BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg328231 Length=1107 Score E Sequences producing significant alignments: (Bits) Value AT4G35160.1 | Symbols: | O-methyltransferase family protein | ... 1773 0.0 AT4G35150.1 | Symbols: | O-methyltransferase family protein | ... 929 0.0 > AT4G35160.1 | Symbols: | O-methyltransferase family protein | chr4:16730760-16732811 REVERSE LENGTH=1381 Length=1381 Score = 1773 bits (960), Expect = 0.0 Identities = 1060/1109 (96%), Gaps = 4/1109 (0%) Strand=Plus/Plus Query 1 ATGGAAGA-AACTAAAAGAAGAGTACTAGATGAAGAAGCCAAAGCTTCTCTAGACATATG 59 |||||||| || |||||||| |||| ||||||||||||| |||||||||||||||||||| Sbjct 46 ATGGAAGACAA-TAAAAGAAAAGTATTAGATGAAGAAGCGAAAGCTTCTCTAGACATATG 104 Query 60 GAGGTATGTCTTTGGGTTTGCAGATATCGCAGCTGCAAAGTGTGCCATTGATCTTAAAAT 119 || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 105 GAAGTATGTCTTTGGGTTTGCAGATATAGCAGCTGCAAAGTGTGCCATTGATCTTAAAAT 164 Query 120 ACCAGAAGCCATTGAAAACCATCCTTCTTCACAGCCCGTAACACTAGCCGAACTCTCCTC 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 165 ACCAGAAGCCATTGAAAACCATCCTTCTTCACAGCCCGTAACACTAGCCGAACTCTCCTC 224 Query 180 CGCCGTCTCCGCCTCTCCCTCACATCTCCGCCGTATAATGAGGTTTCTTGTACACCAAGG 239 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 225 CGCCGTCTCCGCCTCTCCCTCGCATCTCCGCCGTATAATGAGGTTTCTTGTACACCAAGG 284 Query 240 AATCTTCAAAGAAATCCCCACAAAAGATGGTTTAGCCACAGGCTACGCTAATACGCCACT 299 |||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 285 AATCTTTAAAGAAATCCCCACAAAAGATGGTTTAGCTACAGGCTACGTTAATACGCCACT 344 Query 300 CTCTCGCCGTATGATGATCACAAAACGTGATGGCAAATCGCTGGCTCCTTTTGTTCTCTT 359 |||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct 345 CTCTCGCCGTTTGATGATCACAAGACGTGATGGAAAATCGCTGGCTCCTTTTGTTCTCTT 404 Query 360 CGAAACAACTCCCGAGATGCTCGCTCCATGGTTGAGACTTAGCTCAGTCGTTTCTTCGCC 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 405 CGAAACAACTCCCGAGATGCTCGCTCCATGGTTGAGACTTAGCTCAGTCGTTTCTTCGCC 464 Query 420 GGTCAACGGTTCAGCTCCACCACCGTTTGATGCAGTGCACGGTAAGGACGTGTGGTCGTT 479 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 465 GGTCAACGGTTCAACTCCACCACCGTTTGATGCAGTGCACGGTAAGGACGTGTGGTCGTT 524 Query 480 CGCGCAGGATAATCCGTTCCTCAGCGATATGATCAATGAGGCCATGGCTTGTGATGCAAG 539 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 525 CGCGCAGGATAATCCCTTCCTCAGCGATATGATCAATGAGGCCATGGCTTGTGATGCAAG 584 Query 540 GCGCGTGGTGCCACGTGTAGCCGGAGCTTGTCACGGCTTGTTTGACGGCGTGG-TCACGG 598 ||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct 585 GCGCGTGGTGCCACGTGTAGCCGGAGCTTGTCACGGCTTGTTTGATGGCGTGACT-ACGA 643 Query 599 TGATTGACGTAGGAGGCGGTACCGGAGAGACGATGGGGATACTCGTAAAGGAGTTTCCTT 658 || ||||||||||||| ||||| ||||||||||||||||| || || ||||||||||||| Sbjct 644 TGGTTGACGTAGGAGGTGGTACGGGAGAGACGATGGGGATGCTTGTGAAGGAGTTTCCTT 703 Query 659 GGATCAAAGGATTTAACTTTGATCTTCCTCATGTTATTGAAGTTGCTCAAGTCTTGGACG 718 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 704 GGATCAAAGGATTTAACTTTGATCTTCCTCATGTCATTGAAGTTGCTGAAGTCTTGGACG 763 Query 719 GTGTCGAGAATGTTGAGGGCGATATGTTTGATTCTATCCCCGCATGCGACGCTGTTATCA 778 |||| |||||||||||||||||||||||||||||||| || || |||||||| || ||| Sbjct 764 GTGTTGAGAATGTTGAGGGCGATATGTTTGATTCTATTCCGGCTTGCGACGCCATTTTCA 823 Query 779 TCAAGTGGGTGTTACACGATTGGGGAGACAAAGACTGCATAAAGATATTGAAGAATTGCA 838 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 824 TCAAGTGGGTGTTACACGATTGGGGAGACAAAGATTGCATAAAGATATTGAAGAATTGCA 883 Query 839 AAGAAGCGGTCCCACCAAATAACGGGAAAGTGTTGATAGTAGAATCGGTGATCGGAGAGA 898 ||||||||||||| ||||||| ||| |||||||||||||| ||||||||||||||||||| Sbjct 884 AAGAAGCGGTCCCTCCAAATATCGGAAAAGTGTTGATAGTGGAATCGGTGATCGGAGAGA 943 Query 899 ATAAAAAGACGATGATAGTGGACGAAAGAGATGACAAGTTAGAGCACGTGAGATTGATGC 958 |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct 944 ATAAAAAGACGATGATAGTGGACGAACGAGATGAAAAGTTAGAGCACGTGAGATTGATGC 1003 Query 959 TTGATATGGTGATGATGGCTCACACAAGCACAGGCAAAGAACGAACTTTGAAAGAATGGG 1018 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1004 TTGATATGGTGATGATGGCTCACACAAGCACAGGCAAAGAACGGACTTTGAAAGAATGGG 1063 Query 1019 ACTTTGTTCTTAAAGAAGCTGGTTTTGCTCGATATGAGGTTCGGGACATTGATGATGTTC 1078 |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct 1064 ACTTTGTTCTTAAAGAAGCTGGCTTTGCTCGATATGAGGTTAGGGACATTGATGATGTTC 1123 Query 1079 AGTCTCTTATCATCGCGTATCGGTCTTAA 1107 || |||||| |||||||||||||||||| Sbjct 1124 AGAGTCTTATAATCGCGTATCGGTCTTAA 1152 > AT4G35150.1 | Symbols: | O-methyltransferase family protein | chr4:16726948-16728531 REVERSE LENGTH=978 Length=978 Score = 929 bits (503), Expect = 0.0 Identities = 606/656 (92%), Gaps = 6/656 (1%) Strand=Plus/Plus Query 455 TGCACGGTAAGGACGTGTGGTCGTTCGCGCAGGATAATCCGTTCCTCAGCGATATGATCA 514 |||| ||||||||| ||||| ||||||| |||||||||| || || |||| | |||||| Sbjct 326 TGCATGGTAAGGACTTGTGGGCGTTCGCACAGGATAATCTGTGCCACAGCCAGCTGATCA 385 Query 515 ATGAGGCCATGGCTTGTGATGCAAGGCGCGTGGTGCCACGTGTAGCCGGAGCTTGTCACG 574 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 386 ACGAGGCCATGGCTTGTGATGCAAGGCGCGTGGTGCCACGTGTAGCTGGAGCTTGTCAAG 445 Query 575 GCTTGTTTGACGGCGTGGTC-ACGGTGATTGACGTAGGAGGCGGTACCGGAGAGACGATG 633 |||||||||||||||||| | |||||| ||||||||||||| |||||||||||||||||| Sbjct 446 GCTTGTTTGACGGCGTGG-CTACGGTGGTTGACGTAGGAGGAGGTACCGGAGAGACGATG 504 Query 634 GGGATACTCGTAAAGGAGTTTCCTTGGATCAAAGGATTTAACTTTGATCTTCCTCATGTT 693 || ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 505 GGAATACTTGTAAAGGAGTTTCCTTGGATCAAAGGATTTAACTTTGACCTTCCTCATGTT 564 Query 694 ATTGAAGTTGCTCAAGTCTTGGACGGTGTCGAGAATGTTGAGGGCGATATGTTTGATTCT 753 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 565 ATTGAAGTTGCTCAAGTCTTGGACGGTGTTGAGAATGTTGAGGGCGATATGTTTGATTCT 624 Query 754 ATCCCCGCATGCGACGCTGTTATCATCAAGTGGGTGTTACACGATTGGGGAGACAAAGAC 813 || || ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 625 ATTCCGGCAAGCGACGCTGTTATCATCAAGTGGGTGTTACACGATTGGGGAGACAAAGAT 684 Query 814 TGCATAAAGATATTGAAGAATTGCAAAGAAGCGGTCCCACCAAATAACGGGAAAGTGTTG 873 |||||||||||||||||||||||||||||||| || | |||||||| ||| ||||||||| Sbjct 685 TGCATAAAGATATTGAAGAATTGCAAAGAAGCTGTTCTACCAAATATCGGCAAAGTGTTG 744 Query 874 ATAGTAGAATCG-GTGATCGGAGAGAATAAAAAGACGATGATAGTGGACGAAAGAGATGA 932 ||||| || | | || ||||||||||| ||||| |||||||||| ||| ||||||||||| Sbjct 745 ATAGTGGAGT-GTGTTATCGGAGAGAAGAAAAACACGATGATAGCGGAAGAAAGAGATGA 803 Query 933 CAAGTTAGAGCACGTGAGATTG-ATGCTTGATATGGTGATGATGGCTCACACAAGCACAG 991 |||||||||||||||||||||| | |||||| ||||||||||||| |||||||||||||| Sbjct 804 CAAGTTAGAGCACGTGAGATTGCA-GCTTGACATGGTGATGATGGTTCACACAAGCACAG 862 Query 992 GCAAAGAACGAACTTTGAAAGAATGGGACTTTGTTCTTAAAGAAGCTGGTTTTGCTCGAT 1051 ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 863 GCAAAGAACGAACTTTGAAAGAATGGGACTTTGTTCTTACAGAAGCTGGCTTTGCTCGAT 922 Query 1052 ATGAGGTTCGGGACATTGATGATGTTCAGTCTCTTATCATCGCGTATCGGTCTTAA 1107 |||||||| | ||| |||||||||||||||||||||||||||| ||||| |||||| Sbjct 923 ATGAGGTTAGAGACTTTGATGATGTTCAGTCTCTTATCATCGCATATCGATCTTAA 978 Score = 459 bits (248), Expect = 3e-128 Identities = 306/334 (92%), Gaps = 4/334 (1%) Strand=Plus/Plus Query 1 ATGGAAGAAACTAAAA-GAAGAGTACTAGATGAAGAAGCCAAAGCTTCTCTAGACATATG 59 |||||||||| ||||| ||| || ||||||||||||| ||||||||| |||||||||| Sbjct 1 ATGGAAGAAAGTAAAAGGAA-TTTATTAGATGAAGAAGCGAAAGCTTCTTTAGACATATG 59 Query 60 GAGGTATGTCTTTGGGTTTGCAGATATCGCAGCTGCAAAGTGTGCCATTGATCTTAAAAT 119 ||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 60 GAGATATGTTTTTGGGTTTGCAGATATTGCAGCTGCAAAGTGTGCCATTGATCTCAAAAT 119 Query 120 ACCAGAAGCCATTGAAAACCATCCTTCTTCACAGCCCGTAACACTAGCCGAACTCTCCTC 179 ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct 120 ACCAGAAGCCATTGAAAACCATCCTTCGTCACAGCCCGTGACACTATCCGAACTCTCCTC 179 Query 180 CGCCGTCTCCGCCTCTCCCTCACATCTCCGCCGTATAATGAGGTTTCTTGTACACCAAGG 239 |||||||| || ||||| ||||||||||||||||||||| |||||||||| |||||||| Sbjct 180 TGCCGTCTCTGCTTCTCCTTCACATCTCCGCCGTATAATGCGGTTTCTTGTGCACCAAGG 239 Query 240 AATCTTCAAAGAAATCCCCACAAAAGATGGTTTAGCCACAGGCTACGCTAATACGCCACT 299 | ||||||||||| ||||||||||||||||||||||||| |||||| |||| |||||||| Sbjct 240 ACTCTTCAAAGAAGTCCCCACAAAAGATGGTTTAGCCACTGGCTACACTAACACGCCACT 299 Query 300 CTCTCGCCGTATGATGATCACAAAACGTG-ATGG 332 |||||||||||||||||||||||||| || |||| Sbjct 300 CTCTCGCCGTATGATGATCACAAAAC-TGCATGG 332 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54266789145 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5