BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg328538 Length=3666 Score E Sequences producing significant alignments: (Bits) Value AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, puta... 4080 0.0 AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin r... 1110 0.0 > AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative | chr4:15431528-15438443 FORWARD LENGTH=3609 Length=3609 Score = 4080 bits (2209), Expect = 0.0 Identities = 3174/3619 (88%), Gaps = 149/3619 (4%) Strand=Plus/Plus Query 91 GAAGATACAGTCGGAAGTAAAGAAGAGGTTTGTCCTCTTGGCGAGGTTGAAGCA-ATTTT 149 ||||| |||| ||||||| | | ||| |||||||||||||||| ||||| | ||||| Sbjct 97 GAAGAAACAGGCGGAAGT--A-ACCAGGATTGTCCTCTTGGCGAGATTGAA-AAGATTTT 152 Query 150 GGACCGTGAATTGTGTCCTACTGCATCTAACGATCCGGATTCTTCTGACAACGGGACACC 209 ||||||||||| | ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 153 GGACCGTGAATGGCGTCCTACTGCATCTAACAATCCGAATTCTTCTGACAACGGGACACC 212 Query 210 AACCCAAGTTTTTGTGAAACAATATCAGGTGAAGTGGAAGGGAAAATCGTACCTGCACTG 269 ||||| |||| | ||||||||||||| |||||||||||||| ||||||| ||||||| Sbjct 213 AACCCTAGTTGTCGTGAAACAATATCTTGTGAAGTGGAAGGGGTTATCGTACTTGCACTG 272 Query 270 CTCTTGGGTGCCCGAGCAGGAATTCGAGAAGGCTTACAAGTCCCATCCTCGTTTAAAATT 329 ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | Sbjct 273 CTCTTGGGTGCCCGAGCAGGAGTTCGAGAAGGCTTACAAGTCCCATCCTCATTTAAAACT 332 Query 330 AAAATCAAGGGTCGA-CAAATTTAACGCTGAC-AAGGACAAATTCATCGCTGAGAACGGA 387 ||||| |||||| || || |||||||||| | | |||| ||||||||||||||||||| Sbjct 333 AAAATTAAGGGT-GACCAGGTTTAACGCTG-CTATGGACGTATTCATCGCTGAGAACGGA 390 Query 388 G---ATGAGTATATTGCCATTCGTCCTGAGTGGACAACTGTTGACCGGATTATTGCTTGC 444 | |||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||| Sbjct 391 GCTCATGAGTTTATCGCCATTCGTCCTGAATGGAAAACTGTTGACCGGATTATTGCTTGC 450 Query 445 CGGGGAA-GAGGTGATTTTAAGGAGTATCTAGTTAAGTACAAAGAACTTTCTTA-TGAAG 502 | ||||| ||| |||| |||||||||| || |||||||||||||||||||| ||| Sbjct 451 C-GGGAAGGAGATGATGGGGAGGAGTATCTGGTGAAGTACAAAGAACTTTCTTACAGAA- 508 Query 503 AAAGTTACTGGGAATCAGAATCTCTCATCTCAAAGTTCCAGAACGAAGTTCAAAGGTTTA 562 | |||||||||||||| |||||| ||||||| | |||||||| ||| | |||||||||| Sbjct 509 ATAGTTACTGGGAATCTGAATCTGACATCTCAGATTTCCAGAATGAAATCCAAAGGTTTA 568 Query 563 AGGATATAAACTCTCGCTCTCGTAGAGATAAATATGTCGGATACAAGAGAAATCAAAAGG 622 |||||||||||||| |||||||||||||||||||||||| | | ||||||||| | ||| Sbjct 569 AGGATATAAACTCTAGCTCTCGTAGAGATAAATATGTCGAAAATGAGAGAAATCGAGAGG 628 Query 623 AATTCAAACAGTTTGAACATACTCCTGAATTTCTTACAGGCACATTGCATACATACCAGC 682 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct 629 AATTCAAACAGTTTGATCTTACTCCTGAATTTCTTACAGGCACATTGCATACATACCAGC 688 Query 683 TCGAAGGGCTGACTTTCTTAAAGCATTCATGGTCCAAGGGAACCAATGTAATCCTTGCGG 742 |||||||||||| |||| ||| | |||||||||||||| |||||||||||||||||||| Sbjct 689 TCGAAGGGCTGAATTTCCTAAGGTATTCATGGTCCAAGAAAACCAATGTAATCCTTGCGG 748 Query 743 ATGAAATGGGACTAGGCAAAACTATTCAGAGCATTGCCTTCTTGGCTTCTTTGTTCGAGG 802 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 749 ATGAAATGGGACTAGGCAAAACTATTCAGAGCATTGCCTTCTTGGCCTCTTTGTTCGAGG 808 Query 803 AAAACTTATCTCCTCATCTAGTTGTTGCTCCTCTCTCAACCCTCCGTAACTGGGAGAGGG 862 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 809 AAAACTTATCTCCTCATCTAGTTGTTGCTCCTCTCTCAACCATCCGTAACTGGGAGAGGG 868 Query 863 AATTTGCCACCTGGGCACCACATATGAATGTGGTTATGTACACTGGG-ACTTCGGAAGCA 921 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 869 AATTTGCCACCTGGGCACCACATATGAATGTGGTTATGTACACTGGGGA-TTCGGAAGCA 927 Query 922 CGTGATGTTATTTGGGAACATGAGTTCTACTTCCCTAAAGGGCGTAAAATTAAGTTTGAT 981 ||||||||||| ||||||||||||||||||||| || |||||||||||| |||||||||| Sbjct 928 CGTGATGTTATATGGGAACATGAGTTCTACTTCTCTGAAGGGCGTAAAAGTAAGTTTGAT 987 Query 982 GTCCTCCTCACGTCATATGAGATGATTAACCAAGACACATCAGTTCTGAAACCAATCAAG 1041 ||| | |||||| | ||||||||| || ||| || | ||||||||||| ||||||||| Sbjct 988 GTCTTGCTCACGACGTATGAGATGGTTCACCCAGGGATATCAGTTCTGAGTCCAATCAAG 1047 Query 1042 TGGACGTGCATGATTGTTGATGAAGGCCATCGGTTGAAAAATAAGGATTCAAAGCTATAC 1101 ||||||||||||||| |||||||||||||||||||||||||| || | |||||||| ||| Sbjct 1048 TGGACGTGCATGATTATTGATGAAGGCCATCGGTTGAAAAATCAGAAGTCAAAGCTGTAC 1107 Query 1102 TCTTCATTGAATCAGTTTACGAGTAAGCATCGCGTTCTGTTGACCGGAACACCACTTCAG 1161 |||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 1108 TCTTCATTGAGTCAGTTTACAAGTAAGCATATCGTTCTGTTGACCGGAACACCACTTCAG 1167 Query 1162 AACAACTTGGATGAACTTTTCGTTCTCATGCATTTTCTTGATGCCGTCAAGTTTGCGAGT 1221 ||||||||| |||||||||||| ||| ||||||||||||||||| | |||||||| |||| Sbjct 1168 AACAACTTGAATGAACTTTTCGCTCTGATGCATTTTCTTGATGCGGACAAGTTTGGGAGT 1227 Query 1222 ATGGAGAACTTTCAAAAGGAGTTTAAGGATATAAATCAAGAGAAGCAGATTTCAAGACTC 1281 ||||||| |||||| | | | ||| ||| || | | || |||||||||||||||| Sbjct 1228 TTGGAGAAGTTTCAA--G-A-TATAA--ATA-AAG--A-G-GA-GCAGATTTCAAGACTC 1275 Query 1282 CACCAAATGTTGGCTCCACATCTGCTTAGAAGGTTAAAGAAAGACGTGCTCAAGGATAAG 1341 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 1276 CACCAAATGTTGGCTCCGCATCTGCTCAGAAGGTTAAAGAAAGACGTGCTCAAGGATAAG 1335 Query 1342 ATGCCCCCAAAGAAGGAGCTCATTTTGCGTGTTGATCTGAGCAGCCAGCAAAAAGAAGTG 1401 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1336 GTGCCCCCAAAGAAGGAGCTCATTTTGCGTGTTGATATGAGCAGCCAGCAAAAAGAAGTG 1395 Query 1402 TACAAAGCTGTTATTACCAATAATTATCAAGTCTTGACAAAGAAACGAGGTGCTAAAATA 1461 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1396 TACAAAGCTGTTATTACCAATAATTATCAAGTCTTGACAAAGAAACGAGATGCTAAAATA 1455 Query 1462 TCTAACGTGCTAATGGA-TCTACGCAAAGTTTGCTCTCATCCGTATCTGTTAAAAGACGT 1520 ||||||||||||||| | | ||||| |||||||||||||||||||||||||| |||| | Sbjct 1456 TCTAACGTGCTAATGAAAT-TACGCCAAGTTTGCTCTCATCCGTATCTGTTACCAGACTT 1514 Query 1521 TGAGCCAAGACTTGAAGACGCAAATGAAGCTTTTACAAAACTCTTGGAAGCTTCTGGAAA 1580 |||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 1515 TGAGCCAAGATTTGAAGACGCAAATGAAGCTTTTACAAAACTATTGGAAGCTTCCGGAAA 1574 Query 1581 GTTGCAATTGTTAGACAAAATGATGGTCAAACTCAAAGAACAGGGGCACAGAGTGCTAAT 1640 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1575 GTTGCAACTGTTAGACAAAATGATGGTCAAACTCAAAGAGCAGGGGCACAGAGTGCTAAT 1634 Query 1641 CTATTCACAATTCCAACACACGCTTGACCTTTTCCAAGATTACTGCAGTTTCAAGAGTTG 1700 |||| | |||||||||||||| ||| ||||||| |||| |||| || |||||||| ||| Sbjct 1635 CTATACCCAATTCCAACACACCCTTTACCTTTTGGAAGACTACTTCACTTTCAAGAATTG 1694 Query 1701 GAAATATGAACGGATTGATGGAAAGGTCGGTGGAGCTGAGAGGCAAGCAAGCATAGATCG 1760 ||| ||||||||||||||||||||| || ||||| |||||||||||| ||| |||||||| Sbjct 1695 GAATTATGAACGGATTGATGGAAAGATCAGTGGACCTGAGAGGCAAGTAAGAATAGATCG 1754 Query 1761 GTTTAATGCAGAAAAGTCTAACCGGTTCTGTTTTTTGCTCACTACAAGAGCTGGTGGAAT 1820 ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| Sbjct 1755 GTTTAATGCAGAAAACTCGAACCGGTTCTGTTTTTTGCTCAGTACAAGAGCTGGTGGAAT 1814 Query 1821 AGGAATAAACCTTGCAACAGCTGATACAGTCATCATTTATGACAGTGATTGGAATCCTCA 1880 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1815 AGGGATAAACCTTGCAACAGCTGATACAGTCATCATTTATGACAGTGATTGGAATCCTCA 1874 Query 1881 TGCTGATCTCCAGGCTATGGCTAGAGCTCATCGTCTTGGCCAAACAAATAAGGTCATGAT 1940 |||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||| Sbjct 1875 TGCTGATCTCCAGGCTATGGCTAGAGTTCATCGGCTTGGCCAAACAAATAAGGTAATGAT 1934 Query 1941 TTACAGGCTCATTCACCGAGCTACGGTGGAAGAGCGGATGGTGGAGATTACTAAGAAGAA 2000 ||||| || |||||| || ||| || ||||| |||||| ||||||| || ||||| || Sbjct 1935 CTACAGACTGATTCACAAAGGTACTGTAGAAGAACGGATGATGGAGATAACCAAGAACAA 1994 Query 2001 GATGCTTCTAGAGCATCTCGTAGTGGGGAATATGGAAAACCCACATCTTCGGCAGGACGT 2060 ||||||||||||||||||||| ||||| || | | ||| | |||| | ||||||| Sbjct 1995 GATGCTTCTAGAGCATCTCGTCGTGGG-AA-A---ACAAC--A--TCTTTGTCAGGACGA 2045 Query 2061 GTTAGATGACATCATCAAATATGGTTCCAAGGAGCTTTTCTCTGAAGAGAATGATGAAGC 2120 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2046 GTTAGATGACATCATCAAATATGGTTCCAAGGAACTTTTCTCTGAAGAGAATGATGAAGC 2105 Query 2121 AGGGAAGTCTGGAAAAATCCATTATGATGATGCTGCTATTGAAAAGTTGCTTGACCGTGA 2180 ||||| |||||||||||||||||| |||||||||||||| ||| ||||||| || ||| | Sbjct 2106 AGGGAGGTCTGGAAAAATCCATTACGATGATGCTGCTATCGAACAGTTGCTAGATCGTAA 2165 Query 2181 TCATGTAGATGCTAAGGAGGTCTCACTGGATGATGAGGAGGATAA-TGGTTTTTTAAAGA 2239 ||||||||||||| ||||||||||||||||||||||||||| || || ||||||||||| Sbjct 2166 TCATGTAGATGCTGTGGAGGTCTCACTGGATGATGAGGAGGA-AACTGATTTTTTAAAGA 2224 Query 2240 ATTTCAAGGTGGCCACTTTTAAGTATATAGATGAC-AA--TGAGGCTGCAGCATCAGAGG 2296 ||||||||||||| | |||| ||||| ||||||| || |||||||||||||| ||||| Sbjct 2225 ATTTCAAGGTGGCTAGTTTTGAGTATGTAGATGATGAAAATGAGGCTGCAGCATTAGAGG 2284 Query 2297 AGGCACAAGCTATTGAAAACAATTCTTCAG-A-----T----A--GAACAAGTCATTGGA 2344 ||||||||||||| |||||||||||||||| | | | |||||||||| |||| Sbjct 2285 AGGCACAAGCTATAGAAAACAATTCTTCAGTAAGAAATGCTGATAGAACAAGTCACTGGA 2344 Query 2345 AAGAGTTGCTAAAAGACAAATATGAAGTGCAACAAGCCGAAGAGCTCAATGCTCTTGGAA 2404 |||| ||||| |||||||||||||||||||||||||| || ||||||| ||||||||||| Sbjct 2345 AAGATTTGCTGAAAGACAAATATGAAGTGCAACAAGCTGAGGAGCTCAGTGCTCTTGGAA 2404 Query 2405 AGAGGAAGCGAAACGGCAAGCAGGTGATGTATGCTGAAGAAGATGATCTTGATGGTTTAG 2464 |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2405 AGAGGAAGAGAAACGGCAAGCAGGTGATGTATGCTGAAGA---TGATCTTGATGGTTTAG 2461 Query 2465 AAGTGACCTCTGATGAGAAGGAGGAAGATTATCTTGATGATTTAGAAGTGATCTCTGATG 2524 ||| | |||||||||| |||| ||| ||| ||||||||||||| |||||| |||||||| Sbjct 2462 AAGAAATCTCTGATGAGGAGGACGAATATTGTCTTGATGATTTAAAAGTGACCTCTGATG 2521 Query 2525 AGAAGGAGGAAGCAGATGACGCCGAGCCAACTGTTGTTAAAGCAGCTCGACAGAGAAAGC 2584 || |||||||||||||||| | || | | || ||||||||||||||||||| Sbjct 2522 AGGAGGAGGAAGCAGATGA-----A-CC--C-G-----AA-GCAGCTCGACAGAGAAAGC 2566 Query 2585 CGAGGACGGTTACAAAGCCTTACAGAAAAAGGAATCGCGATAAATCGGAGT---TACCTG 2641 ||||||||||||||| |||||||||||||||| ||||||||| |||||| ||||| Sbjct 2567 CGAGGACGGTTACAAGGCCTTACAGAAAAAGGGCTCGCGATAATTCGGAGGAAATACCTT 2626 Query 2642 TGATGGAAGGCGGAGGGAAATCTTTCGA-GGTGCTAGGTTTTAAC-AGGACTGAAAGGGA 2699 |||||||||||| ||||| || | || | |||||| || |||||| || ||||| ||||| Sbjct 2627 TGATGGAAGGCGAAGGGAGATATCTC-ATGGTGCTGGGATTTAACGAG-ACTGAGAGGGA 2684 Query 2700 AACCTTTTTACGTACGTTTAAGAGGTATGGAGCTGGAGACTTTGATTGGAAGGAGTTTAT 2759 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 2685 TATATTTTTACGTACGTTTAAGAGGTATGGAGCTGGAAACTTTGATTGGAAGGAGTTTGT 2744 Query 2760 TCATCCCTTACATATGAAGACCTTTGACGAGATAAATAAGTATGGAATATTGTTTTTGCA 2819 | |||||||| | |||||||||| |||||||||||||||||||||||| || |||||| | Sbjct 2745 TAATCCCTTATACATGAAGACCTATGACGAGATAAATAAGTATGGAATCTTATTTTTGAA 2804 Query 2820 ACACATTGCCGAAAACTCTAA-GAATAATTCTTCAACTTTTTCAGTTATTTCGGCAATGG 2878 |||||||||||||||| ||| || ||||||| ||| |||| ||||||| ||||||||| Sbjct 2805 ACACATTGCCGAAAACCCTACCGA-TAATTCTACAAATTTTAAAGTTATTACGGCAATGG 2863 Query 2879 TCTCTGCAGATGGAATTCCGAAAGAAGGGATAAGAAGTGACGAGCTACTAATGAGCATGA 2938 ||| |||||||||| |||| |||||||||||||| ||||||||||||||| ||||||||| Sbjct 2864 TCTATGCAGATGGAGTTCCCAAAGAAGGGATAAGCAGTGACGAGCTACTAGTGAGCATGA 2923 Query 2939 CTTTTATGATGCTATTAAAGGAGAAGTGTCAATTTTTGGACGACCATCCGACAGAACCCG 2998 |||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||| | Sbjct 2924 CTTTTATGATGCTAGTAAAGGAGAAGTGTCAATTTTTGGACAACCATCCGACAGCACCTG 2983 Query 2999 TTTTC-CGTGACTACAG-CATCAGAAAGTACAATTTGAGAAGTGGAGCATTTTCTAAGGA 3056 ||||| | | ||||| | |||||| |||||||||||||||| |||||||||||||||||| Sbjct 2984 TTTTCTC-TAACTAC-GTCATCAGTAAGTACAATTTGAGAAATGGAGCATTTTCTAAGGA 3041 Query 3057 AGAACATGATAGGATATTGATTCCTGCTGTTGCCAAGCATGGATATGGAA-ACTGGACGG 3115 |||||||||||||||| |||||||||||||| |||||||||| ||||| | | ||| || Sbjct 3042 AGAACATGATAGGATACTGATTCCTGCTGTTTCCAAGCATGGCTATGGTAGA-TGGGTGG 3100 Query 3116 CCGTCGTTGAAGACGAAGAGATAGGGTTCCAAGAGGTTGCCCGAAAAGACCTGAATATCC 3175 || |||||||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct 3101 CCATCGTTGAAGACGAAGAGATAGGGTTCCAAGAGGTTGCCTGCAAAGACCTGAATATCC 3160 Query 3176 CTTTCCCTTACACAGATGCTGAAATTT-CTCTTATAAGAATTCGTGACCATGTGGGAAAA 3234 |||||||| | | ||| || |||| | ||| || ||||||| ||||||||||||||||| Sbjct 3161 CTTTCCCT--C-CTGATACT-AAATCTGCTCGTAAAAGAATTTGTGACCATGTGGGAAAA 3216 Query 3235 CGGTTTAAGAAGATGGAGGATGCGATCAAGTATGAGTACACAGAAAATG-TACATAAGGA 3293 ||| ||||||||||||||||||| || |||||||||||| ||||||| | ||| | || Sbjct 3217 CGGGTTAAGAAGATGGAGGATGCCATAAAGTATGAGTACGCAGAAAA-GATACTTGCTGA 3275 Query 3294 ACAAGCAGAAGCTAGAAGA-AAGATGATGGATACAGCGGGACCGAGCTTTGCAGCTGCAG 3352 ||||||| ||||| ||| | || | | ||| ||| | | ||||| | ||||| Sbjct 3276 ACAAGCAAAAGCT-GAA-ACAA-A-G--GGA-ACA-----A--G--CTTTGTTGATGCAG 3319 Query 3353 ACAAAGAAATGCTTGATGAACTGCCTAAGAATGATCCCATCATTTCAGAAGAAATTTCTG 3412 | |||||||||||| | | | || ||||||||||| |||| || ||| ||||| Sbjct 3320 AAAAAGAAATGCTT-A--A---G---AA---TGATCCCATCACTTCAAAAAAAAATTCTG 3367 Query 3413 CAGCTGCCGTAAACAACAAGCAAA-CTAGGGTTGAAGTGGCTCAACCATACAATCAGAGT 3471 || ||||||| ||||||||||| | || |||||| |||||||| ||||| |||||||| Sbjct 3368 CAACTGCCGTTGACAACAAGCAAGGC-AGAGTTGAAATGGCTCAATCATACGATCAGAGT 3426 Query 3472 GTTAATTATGGGAATTCAGG-GATGCCATTCGAGACATATTTAAACATTCAACCGCTGAC 3530 |||||| | | || ||||| || | ||||| ||||||||||| | ||||||||||||| Sbjct 3427 GTTAATGA-G--AAGTCAGGTGA-GTCATTCCAGACATATTTAGATATTCAACCGCTGAA 3482 Query 3531 TCGAATGCTGAGGGAGAGCTTTATA-CCTCTGGAACGTATCAGTGAAAGAA-TAAGTGA- 3587 |||||||| |||||||||||||| | |||||||||| ||||| ||| ||| |||| | Sbjct 3483 TCGAATGCCGAGGGAGAGCTTTA-AGCCTCTGGAACCTATCAATGAG-GAAATAAGC-AC 3539 Query 3588 TGGGAGTCATTCCAGAAGCGCCGGGACAGATCATGATGTTGAGATGGATGCAGCGGATAA 3647 | || | | | | ||| ||||||||||||||||| |||||||||||||||||||| Sbjct 3540 TAGG---C-T---A-A-GCGTTGGGACAGATCATGATGTAGAGATGGATGCAGCGGATAA 3590 Query 3648 CGTTATTGTGTTGGATTGA 3666 | | |||||| |||||||| Sbjct 3591 CATCATTGTGCTGGATTGA 3609 > AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin remodeling factor CHD3 (PICKLE) | chr2:10713807-10723986 FORWARD LENGTH=4402 Length=4402 Score = 1110 bits (601), Expect = 0.0 Identities = 1267/1575 (80%), Gaps = 100/1575 (6%) Strand=Plus/Plus Query 969 AATTAAGTTTGATGTCCTCCTCACGTCATATGAGATGATTAACCAAGACACATCAGTTCT 1028 ||| |||||||||||||||||||| || ||||||||||| |||| ||| || ||||||| Sbjct 1197 AATCAAGTTTGATGTCCTCCTCACATCGTATGAGATGATCAACCTAGATTCAGCAGTTCT 1256 Query 1029 GAAACCAATCAAGT-GGACGTGCATGATTGTTGATGAAGGCCATCGGTTGAAAAATAAGG 1087 |||||||| |||| ||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 1257 AAAACCAATTAAGTGGGA-GTGCATGATTGTTGATGAAGGTCATCGACTGAAAAATAAGG 1315 Query 1088 ATTCAAAGCTATACTCTTCATTGA-ATCAGT-TTACGAGTAAGCATCGCGTTCTGT-TGA 1144 |||||||||| | ||||||||||| | |||| || | ||||| || || |||| | ||| Sbjct 1316 ATTCAAAGCTGTTCTCTTCATTGACA-CAGTATT-CAAGTAACCACCGTATTCT-TCTGA 1372 Query 1145 CCGGAACACCACTTCAGAACAACTTGGATGAACTTTTCGTTCTCATGCATTTTCTTGATG 1204 | |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 1373 CAGGAACACCACTTCAGAACAACTTGGATGAACTTTTCATGCTCATGCATTTTCTTGATG 1432 Query 1205 CCGTCAAGTTTGCGA-GTATGGAGAACTTTCAAAAGGAGTTTAAGGATATAAATCAAGAG 1263 | | ||||||| || || ||||| | || || ||||||| || ||||| ||||||||| Sbjct 1433 CGGGGAAGTTTG-GAAGTTTGGAGGAGTTCCAGGAGGAGTTCAAAGATATTAATCAAGAG 1491 Query 1264 AAGCAGATTTCAAGACTCCACCAAATGTTGGCTCCACATCTGCTTAGAAGGTTAAAGAAA 1323 ||||||| ||||| | ||| ||||||||||||||||| |||| |||||| |||| ||| Sbjct 1492 GAGCAGATCTCAAGGTTGCACAAAATGTTGGCTCCACATTTGCTCAGAAGGGTAAAAAAA 1551 Query 1324 GACGTGCTCAAGGATAAGATGCCCCC-AAAGAAGGAGCTCATTTTGCGTGTTGATCTGAG 1382 ||||| | || || | ||||||| ||| ||||||||||||||||||||||||||||| Sbjct 1552 GACGTAATGAAAGACA---TGCCCCCCAAA-AAGGAGCTCATTTTGCGTGTTGATCTGAG 1607 Query 1383 CAGCCAGCAAAAAGAAGTGT-ACAAAGCTGTTATTACCAATAATTATCAAGTCTTGACAA 1441 ||| | ||| |||||| | | |||||||| || ||||| |||||||||||| ||||||| Sbjct 1608 CAGTCTGCAGAAAGAA-TATTACAAAGCTATTTTTACCCGTAATTATCAAGTATTGACAA 1666 Query 1442 AGAAACG-AGGTGCTAAAATATC--T-AA---CGTGCTAATGGA-TCTACGCAAAGTTTG 1493 | ||| | ||||||| |||| || | || | | | ||||| | |||| ||||| || Sbjct 1667 A-AAAGGGAGGTGCTCAAATTTCCCTTAATAACATTATGATGGAAT-TACGAAAAGTATG 1724 Query 1494 CT-CTCATCCGTATCTGTTAAAAGACGTTGAGCCAAG--ACTTGAAGACGCAAATGAAGC 1550 || | ||||| ||| || || | | ||||||||| | | || | |||||||||||||| Sbjct 1725 CTGC-CATCCTTATATGCTAGAGGGTGTTGAGCCA-GTTA-TTCACGACGCAAATGAAGC 1781 Query 1551 TTTTACAA-AACTCTTGGAAG-CTTCTGGAAAGTTGCAA-TTGTTAGACAAAATGATGGT 1607 ||| | || |||| ||||| | ||| ||||||| ||||| || | ||| ||||||||||| Sbjct 1782 TTTCA-AACAACTTTTGGA-GTCTTGTGGAAAGCTGCAACTTCT-AGATAAAATGATGGT 1838 Query 1608 CAAACTCAAAGAACAGGGGCACAGAGTGCTAATCTATTCACAATTCCAACACACGCTTGA 1667 |||||| ||||| || || |||||||| ||||| || |||| || || || | ||| || Sbjct 1839 CAAACTGAAAGAGCAAGGACACAGAGTCCTAATATACACACAGTTTCAGCATATGCTGGA 1898 Query 1668 CCTT--TTCCAAGATTACTGCAGTT-TCAAGAGTTGGAAATATGAACGGATTGATGGAAA 1724 | || || |||| ||||| | | |||| ||| | || || || ||||||||||| Sbjct 1899 C-TTACTTG-AAGACTACTGTACCCAT-AAGAAATGGCAGTACGAGCGAATTGATGGAAA 1955 Query 1725 GGTCGGTGGAGCTGAGAGGCAAGCAAGCATAGATCGGTTTAATGC-AGAAAAGTCTAACC 1783 ||| || ||||||||| ||||| | ||||||||||||| ||||| | |||| |||||| Sbjct 1956 GGTTGGCGGAGCTGAGCGGCAAATACGCATAGATCGGTTCAATGCCA-AAAATTCTAACA 2014 Query 1784 GGTTCTGTTTTTTGCTCACTACAAGAGCTGGTGGAATAGGAATAAACCTTGCAACAGCTG 1843 ||| |||||||||||| | |||||||||||||| |||||||||| |||||||| |||| Sbjct 2015 AGTTTTGTTTTTTGCTCTCCACAAGAGCTGGTGGCTTAGGAATAAATCTTGCAACGGCTG 2074 Query 1844 ATACAGTCATCATTTATGACAGTGATTGGAATCCTCATGCTGATCTCCAGGCTATGGCTA 1903 ||||||| ||||||||||||||||| |||||||||||||||||||| || || ||||||| Sbjct 2075 ATACAGTAATCATTTATGACAGTGACTGGAATCCTCATGCTGATCTTCAAGCAATGGCTA 2134 Query 1904 GAGCTCATCGTCTTGGCCAAACAAATAAGGTCATGATTTACAGGCTCATTCACCGAG-CT 1962 |||||||||| |||||||||||||||||||| |||||||| |||||||| |||||| | Sbjct 2135 GAGCTCATCGACTTGGCCAAACAAATAAGGTGATGATTTATAGGCTCATAAACCGAGGC- 2193 Query 1963 ACGGTGGAAGAGCGGATGGTGGAGATT-ACTAAGAAGAAGATGCTTCTAGAGCATCTCGT 2021 || | ||||| ||||| || | ||| ||||| ||||| ||| ||||||||||||| || Sbjct 2194 ACCATTGAAGAAAGGATGATGCA-ATTGACTAAAAAGAAAATGGTTCTAGAGCATCTTGT 2252 Query 2022 AGTGGGGAATA-TGGAAAACCCACATC-TTCGGCAGGACGTGTTAGATGACATCATCAAA 2079 || ||||| | | ||||| || | | || ||||| | ||||||||||||||||| Sbjct 2253 TGTTGGGAA-ACTC-AAAACACAAAACATTAATCAGGAAGAGTTAGATGACATCATCAGG 2310 Query 2080 TATGGTTCCAAGGAGCTTTT--CTC-TGAAGAGAATGATGAAGCAGGGAAGTCTGGAAAA 2136 ||||| || ||||||||||| || |||||| |||||||||||| |||||||||||| Sbjct 2311 TATGGATCAAAGGAGCTTTTTGCTAGTGAAGA---TGATGAAGCAGGAAAGTCTGGAAAA 2367 Query 2137 ATCCATTATGATGATGCTGCTATTGA-AAAGTTGCTTGACCGTGATCAT-GTAGATGCTA 2194 || |||||||||||||| ||||| || ||| |||||||| ||||||| | || || || | Sbjct 2368 ATTCATTATGATGATGCGGCTATAGACAAA-TTGCTTGATCGTGATC-TCGTGGAGGC-A 2424 Query 2195 -AGGAGGTCTCACTGGATGATGAGGAGGATAATGGTTTTTTAAAGAATTTCAAGGTGGCC 2253 |||| |||||| |||||||||| ||||| ||||| || |||||| |||||||||||| Sbjct 2425 GAGGAAGTCTCAGTGGATGATGAAGAGGAGAATGGATTCTTAAAGGCTTTCAAGGTGGCT 2484 Query 2254 ACTTTT-AAGTATATAGATGACAATGAGGCTGCAGCATCAGAGG-AGGCACA-AG-CTAT 2309 | |||| || ||||||||||| |||||||| ||||||| ||||| | || | || | | Sbjct 2485 AATTTTGAA-TATATAGATGAAAATGAGGCAGCAGCATTAGAGGCA--CAGAGAGTCGCT 2541 Query 2310 --TGAAAACAATTCTTCAG-AT--A-----GA-A---CAAGTCATTGGAAAGAGTTGCTA 2355 ||||| ||| ||||||| | | || | ||||| ||||| |||||||| || Sbjct 2542 GCTGAAAGCAAATCTTCAGCAGGCAATTCTGATAGAGCAAGTTATTGGGAAGAGTTGTTA 2601 Query 2356 AAAGACAAATATGAAG-TGCAACAAGCCGAAGAGCTCAATGCTCTTGGAAAGAGGAAGCG 2414 ||||| |||| ||| | |||| || || || ||||| |||||||||||||| |||||| | Sbjct 2602 AAAGATAAATTTGA-GCTGCACCAGGCTGAGGAGCTTAATGCTCTTGGAAAAAGGAAGAG 2660 Query 2415 AAA-CGGCAAGCAGGTGATGTATGC-T-GAAGAAGATGATCTTGATGGTTTAGAAG-TG- 2469 || || ||||||| || |||| | | |||||||||||||||| |||||| |||| || Sbjct 2661 AAGTCG-CAAGCAGTTG--GTATCCATTGAAGAAGATGATCTTGCTGGTTTGGAAGATGT 2717 Query 2470 -ACCTCTGATG-AGA 2482 | |||||||| ||| Sbjct 2718 GAGCTCTGATGGAGA 2732 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 182557505577 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5