BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg328596
Length=2799
Score E
Sequences producing significant alignments: (Bits) Value
AT4G31250.1 | Symbols: | Leucine-rich repeat protein kinase fa... 2928 0.0
AT4G31248.1 | Symbols: | other RNA | chr4:15179132-15180803 FO... 1109 0.0
AT4G31240.1 | Symbols: | protein kinase C-like zinc finger pro... 665 0.0
> AT4G31250.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr4:15178925-15181751 REVERSE LENGTH=2307
Length=2307
Score = 2928 bits (1585), Expect = 0.0
Identities = 1906/2056 (93%), Gaps = 41/2056 (2%)
Strand=Plus/Plus
Query 1 ATGACCCGTGATGACAAGTTCCCGATCGTATACTCTCTGTTATTAATCGCCGTGTTCTTC 60
||||||||||||||||| |||||||||||||||||||||||||| |||| | || |||||
Sbjct 1 ATGACCCGTGATGACAAATTCCCGATCGTATACTCTCTGTTATTGATCGTCTTGCTCTTC 60
Query 61 GCTTCTCCTATCTCCAGCGAAGATGATTTTGATGCTCTGTTGAAGTTCAAGTCATCTCTC 120
| ||||||||||| | |||| | |||| ||||||||| |||||||||||||||||||||
Sbjct 61 GTTTCTCCTATCTACGGCGACGGTGATGCTGATGCTCTATTGAAGTTCAAGTCATCTCTC 120
Query 121 GTTAACGGCACCACCCTCGGTGGATGGGACTCCGGCGAACCTCCTTGTTCCGGTGAAAAA 180
|| |||| || | | ||||||||||||||||| || || |||||||| |||||||| |||
Sbjct 121 GTGAACGCCAGCTCGCTCGGTGGATGGGACTCTGGTGAGCCTCCTTGCTCCGGTGATAAA 180
Query 181 GGAAGCGACTCGAAATGGAAAGGAGTGATGTGTTCTAACGGCTCCGTTTTCGCTCTCCGT 240
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 181 GGAAGTGACTCGAAATGGAAAGGAGTGATGTGTTCAAACGGCTCCGTTTTCGCTCTCCGT 240
Query 241 CTCGAGAACATGAGCCTCTCCGG-CACGCTTGACGTTCAAGCGCTCGGGTCCATTCGCGG 299
|| |||||||||||||||||||| | |||||| |||||||||||||||||||| |||||
Sbjct 241 CTAGAGAACATGAGCCTCTCCGGTGA-GCTTGATGTTCAAGCGCTCGGGTCCATCCGCGG 299
Query 300 TCTCAGGAGCATCAGCTTTATGCGTAACCATTTCGAAGGG-AAGATCCCACGTGGACTCA 358
||||| ||| ||||||||||||||||||||||||| |||| |||||||| |||||| ||
Sbjct 300 TCTCAAGAGTATCAGCTTTATGCGTAACCATTTCG-AGGGAAAGATCCCTCGTGGAATCG 358
Query 359 ACGGGCTTGTCTCGTTGGTGCATCTTTACCTTGCGCATAACCGGTTTTCAGGCGAGATAG 418
|||||||||| ||||||| ||||||||||||||||||||||| |||| | || |||||||
Sbjct 359 ACGGGCTTGTTTCGTTGGCGCATCTTTACCTTGCGCATAACCAGTTTACCGGTGAGATAG 418
Query 419 ACGGTGATTTGTTCGCCGGAATGAAGGCTCTTATGAAGGTTCATCTTGAAGGAAACCAAT 478
|||||||||||||| |||| |||||||||||| |||||||||||||||||||||||| |
Sbjct 419 ACGGTGATTTGTTCTCCGGGATGAAGGCTCTTCTGAAGGTTCATCTTGAAGGAAACCGGT 478
Query 479 TTTCCGGTAAGATTCCGGAGTCGTTGGGGAAATTGCCGAGGCTGACTGAGCTGAATCTTG 538
|||||||| |||||||||||||||| ||||||||||||| ||| ||||||||||||||||
Sbjct 479 TTTCCGGTGAGATTCCGGAGTCGTTAGGGAAATTGCCGAAGCTTACTGAGCTGAATCTTG 538
Query 539 AGGATAATATGTTCACC-GGAAAGATACCGGCGTTTAAACAGAAGAATCTCGTTACCGTT 597
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 539 AGGATAATATGTTCACCGGGAAA-ATACCGGCGTTTAAACAGAAGAATCTCGTCACCGTT 597
Query 598 AACGTTGCTAATAATCAGTTAGAGGGTCGAATTCCGTTTACTCTCGGCCTTATGAACATC 657
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 598 AACGTTGCTAACAATCAGTTAGAGGGTCGAATTCCGTTAACTCTCGGCCTTATGAACATC 657
Query 658 ACTTTCTTCTTAGGTAACAAGGGGCTATGTGGAGCGCCGTTGCTTCCGTGCAGATACACT 717
|||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 658 ACTTTCTTCTCAGGTAACAAGGGGCTGTGTGGAGCGCCATTGCTTCCGTGCAGATACACT 717
Query 718 CGTCCGCCGTTCTTCACCGTGTTTCTCCTTGCCCTCACCATCCTCGCCGTCGTAGTCCTC 777
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 718 CGTCCGCCGTTCTTCACCGTGTTTCTCCTTGCCCTCACCATCCTCGCCGTCGTAGTGCTC 777
Query 778 ATTACCGTCTTCCTTTCCGTTTGCATTCTCAGCCGCCGTCAAGCCAAAGGTCAAGACCAA 837
||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 778 ATTACCGTCTTTCTTTCCGTTTGCATTCTCAGCCGCCGTCAAGGCAAAGGACAAGACCAA 837
Query 838 AGCCAAGGCCACGGCCACG----TT--CATGGCCAAGTCTACGGACAAACCGAGCAACAA 891
| |||| ||||||| || || || || ||||||||||||||| |||||||||||
Sbjct 838 ATCCAAAACCACGGCGTCGGCCATTTTCACGGACAAGTCTACGGACAACCCGAGCAACAA 897
Query 892 CA-CA--GTGAGAAGAGCTCGCAGGACTCCAAAGTCTACAGAAAACTAGCTAATGAAACT 948
|| || |||| |||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 898 CAACACAGTGAAAAGAGCTCACAGGACTCCAAGGTCTACAGAAAACTAGCTAATGAAACT 957
Query 949 GTGCAGCGAGATTCAACGGTAACATCAGGAGC-ATTATCAGTGGGAGGTCTGTCTCCAGA 1007
||||||||||||||||| | |||||||||||| || ||| ||||||||||| ||||||||
Sbjct 958 GTGCAGCGAGATTCAACAGCAACATCAGGAGCTAT-ATCCGTGGGAGGTCTCTCTCCAGA 1016
Query 1008 CGAAGACAAGCGAGGAGATCAACGGAAGCTACATTTCGTTAGGAATGATCAGGAGAGATT 1067
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1017 TGAAGACAAACGAGGAGATCAACGGAAGCTACATTTCGTTAGGAATGATCAGGAGAGGTT 1076
Query 1068 CACGCTTCAGGATATGCTCCGTGCATCGGCGGAGGTTCTCGGAAGCGGCGGGTTTGGATC 1127
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1077 CACGCTTCAGGATATGCTCCGTGCATCGGCGGAGGTTCTCGGAAGCGGCGGATTTGGATC 1136
Query 1128 GTCGTACAAAGCGGCTTTATCGAGTGGTCGTGCGGTGGTTGTGAAGCGGTTTAGGTTTAT 1187
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1137 TTCGTACAAAGCGGCTTTATCGAGTGGTCGTGCGGTGGTTGTGAAACGGTTTAGGTTTAT 1196
Query 1188 GAGTAATATCGGGAGAGAAGAGTTTTACGATCATATGAAGAAGATCGGACGATTGTCTCA 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 GAGTAATATCGGGAGAGAAGAGTTTTACGATCATATGAAGAAGATCGGACGATTGTCTCA 1256
Query 1248 CGCTAATCTCCTTCCGTTGATCGCATTCTATTACAGAAAAGAAGAGAAGCTTCTCGTCAC 1307
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 1257 CCCTAATCTCCTTCCGTTGATTGCATTCTATTACAGAAAAGAAGAGAAGCTTCTCGTTAC 1316
Query 1308 CAATTACATTTCCAATGGAAGTCTCGCAAATCTCCTCCATGGTAAAATTAAGGAACTTTG 1367
||||||||||||||||||||| ||||| ||||||||||||| ||| | |
Sbjct 1317 CAATTACATTTCCAATGGAAGCCTCGCTAATCTCCTCCATGCTAAC---------C---G 1364
Query 1368 TTCATCAAATCGAACACCAGGTCAAGTGGTTTTGGATTGGCCGATTAGATTAAAGATTGT 1427
| | | | | | |||||||||||||||||||||||||||| |||| ||||||||
Sbjct 1365 ---A--A---C-A-C-C-AGGTCAAGTGGTTTTGGATTGGCCGATTCGATTGAAGATTGT 1412
Query 1428 AAGAGGAGTTACGAGAGGTTTGGCTTATCTCTATAGAGTGTTCCCTGATTTGAATCTTCC 1487
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1413 AAGAGGAGTTACGAGAGGATTGGCTTATCTCTATAGAGTGTTCCCTGATTTGAATCTTCC 1472
Query 1488 TCATGGCCATCTCAAGTCTTCCAATGTGTTGCTTGACCCCAACTTCGAGCCGCTTCTAAC 1547
|||||||||||||||||||||||||||||||||||| || ||||||||||| || || ||
Sbjct 1473 TCATGGCCATCTCAAGTCTTCCAATGTGTTGCTTGATCCTAACTTCGAGCCTCTACTTAC 1532
Query 1548 GGACTACGCTCTCGTCCCGGTTGTTAACAGAGATCAATCACAGCAGTTCATGGTGGCTTA 1607
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1533 GGACTACGCTCTTGTCCCGGTTGTTAACAGAGATCAATCACAGCAGTTCATGGTGGCTTA 1592
Query 1608 CAAGGCACCTGAGTTCACTCAGCAGGATCGGACTTCGAGAAGATCCGATGTCTGGAGCCT 1667
|||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||
Sbjct 1593 CAAGGCACCTGAGTTCACTCAGCAGGATAGGACTTCGAGAAGATCAGATGTGTGGAGCCT 1652
Query 1668 TGGAATCTTGATTCTTGAGATTCTGACAGGGAAGTTTCCGGCGAATTATCTCCGGCAAGG 1727
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1653 GGGAATCTTGATTCTTGAGATTCTGACAGGGAAGTTTCCGGCGAATTATCTCAGGCAAGG 1712
Query 1728 GAAAGGAGCTGATGATGAGTTAGCTGCTTGGGTTGAGTCTGTAGCGAGAACAGAGTGGAC 1787
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1713 GAAAGGAGCTGATGATGAGTTAGCTGCTTGGGTTGAGTCTGTAGCGAGAACCGAGTGGAC 1772
Query 1788 TGCTGATGTGTTTGATAAGGAGATGAAAGCAGGGAAAGAACACGAAGCACAAATGTTGAA 1847
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1773 TGCTGATGTGTTTGATAAGGAGATGAAAGCAGGGAAAGAGCACGAAGCACAAATGTTGAA 1832
Query 1848 GCTGCTCAAGATTGGGTTGAGATGTTGTGATTGGGACATTGAGAAGAGAATTGAGCTTCA 1907
|||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1833 GCTGCTTAAGATCGGGTTGAGATGTTGTGATTGGGATATTGAGAAGAGAATTGAGCTTCA 1892
Query 1908 TGAGGCTGTTGATCGAATAGAAGAGGTTGATAGAGATGCTGGTGGAGGTCAAGAGAGTGT 1967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1893 TGAGGCTGTTGATCGAATAGAAGAGGTTGATAGAGATGCTGGTGGAGGTCAAGAGAGTGT 1952
Query 1968 TCGATCTTCATACGTGACTGCTAGTGATGATGATCATCGTTCTTCTAGAGCTATGACTGA 2027
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct 1953 TCGATCTTCATACGTGACTGCTAGTGATGGTGATCATCGTTCTTCAAGAGCTATGACTGA 2012
Query 2028 GGAGTTCTCGCTCATG 2043
||||||||| ||||||
Sbjct 2013 GGAGTTCTCACTCATG 2028
> AT4G31248.1 | Symbols: | other RNA | chr4:15179132-15180803
FORWARD LENGTH=1672
Length=1672
Score = 1109 bits (600), Expect = 0.0
Identities = 644/666 (97%), Gaps = 0/666 (0%)
Strand=Plus/Minus
Query 1378 CGAACACCAGGTCAAGTGGTTTTGGATTGGCCGATTAGATTAAAGATTGTAAGAGGAGTT 1437
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 738 CGAACACCAGGTCAAGTGGTTTTGGATTGGCCGATTCGATTGAAGATTGTAAGAGGAGTT 679
Query 1438 ACGAGAGGTTTGGCTTATCTCTATAGAGTGTTCCCTGATTTGAATCTTCCTCATGGCCAT 1497
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 678 ACGAGAGGATTGGCTTATCTCTATAGAGTGTTCCCTGATTTGAATCTTCCTCATGGCCAT 619
Query 1498 CTCAAGTCTTCCAATGTGTTGCTTGACCCCAACTTCGAGCCGCTTCTAACGGACTACGCT 1557
|||||||||||||||||||||||||| || ||||||||||| || || ||||||||||||
Sbjct 618 CTCAAGTCTTCCAATGTGTTGCTTGATCCTAACTTCGAGCCTCTACTTACGGACTACGCT 559
Query 1558 CTCGTCCCGGTTGTTAACAGAGATCAATCACAGCAGTTCATGGTGGCTTACAAGGCACCT 1617
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 558 CTTGTCCCGGTTGTTAACAGAGATCAATCACAGCAGTTCATGGTGGCTTACAAGGCACCT 499
Query 1618 GAGTTCACTCAGCAGGATCGGACTTCGAGAAGATCCGATGTCTGGAGCCTTGGAATCTTG 1677
|||||||||||||||||| |||||||||||||||| ||||| |||||||| |||||||||
Sbjct 498 GAGTTCACTCAGCAGGATAGGACTTCGAGAAGATCAGATGTGTGGAGCCTGGGAATCTTG 439
Query 1678 ATTCTTGAGATTCTGACAGGGAAGTTTCCGGCGAATTATCTCCGGCAAGGGAAAGGAGCT 1737
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 438 ATTCTTGAGATTCTGACAGGGAAGTTTCCGGCGAATTATCTCAGGCAAGGGAAAGGAGCT 379
Query 1738 GATGATGAGTTAGCTGCTTGGGTTGAGTCTGTAGCGAGAACAGAGTGGACTGCTGATGTG 1797
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 378 GATGATGAGTTAGCTGCTTGGGTTGAGTCTGTAGCGAGAACCGAGTGGACTGCTGATGTG 319
Query 1798 TTTGATAAGGAGATGAAAGCAGGGAAAGAACACGAAGCACAAATGTTGAAGCTGCTCAAG 1857
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 318 TTTGATAAGGAGATGAAAGCAGGGAAAGAGCACGAAGCACAAATGTTGAAGCTGCTTAAG 259
Query 1858 ATTGGGTTGAGATGTTGTGATTGGGACATTGAGAAGAGAATTGAGCTTCATGAGGCTGTT 1917
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 258 ATCGGGTTGAGATGTTGTGATTGGGATATTGAGAAGAGAATTGAGCTTCATGAGGCTGTT 199
Query 1918 GATCGAATAGAAGAGGTTGATAGAGATGCTGGTGGAGGTCAAGAGAGTGTTCGATCTTCA 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 198 GATCGAATAGAAGAGGTTGATAGAGATGCTGGTGGAGGTCAAGAGAGTGTTCGATCTTCA 139
Query 1978 TACGTGACTGCTAGTGATGATGATCATCGTTCTTCTAGAGCTATGACTGAGGAGTTCTCG 2037
||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 138 TACGTGACTGCTAGTGATGGTGATCATCGTTCTTCAAGAGCTATGACTGAGGAGTTCTCA 79
Query 2038 CTCATG 2043
||||||
Sbjct 78 CTCATG 73
Score = 1044 bits (565), Expect = 0.0
Identities = 661/706 (94%), Gaps = 11/706 (2%)
Strand=Plus/Minus
Query 669 AGGTAACAAGGGGCTATGTGGAGCGCCGTTGCTTCCGTGCAGATACACTCGTCCGCCGTT 728
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1519 AGGTAACAAGGGGCTGTGTGGAGCGCCATTGCTTCCGTGCAGATACACTCGTCCGCCGTT 1460
Query 729 CTTCACCGTGTTTCTCCTTGCCCTCACCATCCTCGCCGTCGTAGTCCTCATTACCGTCTT 788
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1459 CTTCACCGTGTTTCTCCTTGCCCTCACCATCCTCGCCGTCGTAGTGCTCATTACCGTCTT 1400
Query 789 CCTTTCCGTTTGCATTCTCAGCCGCCGTCAAGCCAAAGGTCAAGACCAAAGCC---A--A 843
||||||||||||||||||||||||||||||| |||||| |||||||||| || | |
Sbjct 1399 TCTTTCCGTTTGCATTCTCAGCCGCCGTCAAGGCAAAGGACAAGACCAAATCCAAAACCA 1340
Query 844 -GGCCACGGCCACGTTCATGGCCAAGTCTACGGACAAACCGAG---CAACAACACAGTGA 899
||| |||||| |||| || ||||||||||||||| ||||| ||||||||||||||
Sbjct 1339 CGGCGTCGGCCATTTTCACGGACAAGTCTACGGACAACCCGAGCAACAACAACACAGTGA 1280
Query 900 GAAGAGCTCGCAGGACTCCAAAGTCTACAGAAAACTAGCTAATGAAACTGTGCAGCGAGA 959
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1279 AAAGAGCTCACAGGACTCCAAGGTCTACAGAAAACTAGCTAATGAAACTGTGCAGCGAGA 1220
Query 960 TTCAACGGTAACATCAGGAGCAT-TATCAGTGGGAGGTCTGTCTCCAGACGAAGACAAGC 1018
|||||| | |||||||||||| | |||| ||||||||||| |||||||| |||||||| |
Sbjct 1219 TTCAACAGCAACATCAGGAGC-TATATCCGTGGGAGGTCTCTCTCCAGATGAAGACAAAC 1161
Query 1019 GAGGAGATCAACGGAAGCTACATTTCGTTAGGAATGATCAGGAGAGATTCACGCTTCAGG 1078
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1160 GAGGAGATCAACGGAAGCTACATTTCGTTAGGAATGATCAGGAGAGGTTCACGCTTCAGG 1101
Query 1079 ATATGCTCCGTGCATCGGCGGAGGTTCTCGGAAGCGGCGGGTTTGGATCGTCGTACAAAG 1138
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 1100 ATATGCTCCGTGCATCGGCGGAGGTTCTCGGAAGCGGCGGATTTGGATCTTCGTACAAAG 1041
Query 1139 CGGCTTTATCGAGTGGTCGTGCGGTGGTTGTGAAGCGGTTTAGGTTTATGAGTAATATCG 1198
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1040 CGGCTTTATCGAGTGGTCGTGCGGTGGTTGTGAAACGGTTTAGGTTTATGAGTAATATCG 981
Query 1199 GGAGAGAAGAGTTTTACGATCATATGAAGAAGATCGGACGATTGTCTCACGCTAATCTCC 1258
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 980 GGAGAGAAGAGTTTTACGATCATATGAAGAAGATCGGACGATTGTCTCACCCTAATCTCC 921
Query 1259 TTCCGTTGATCGCATTCTATTACAGAAAAGAAGAGAAGCTTCTCGTCACCAATTACATTT 1318
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 920 TTCCGTTGATTGCATTCTATTACAGAAAAGAAGAGAAGCTTCTCGTTACCAATTACATTT 861
Query 1319 CCAATGGAAGTCTCGCAAATCTCCTCCATGGTAAAATTAAGGAACT 1364
|||||||||| ||||| ||||||||||||||||| |||| ||||||
Sbjct 860 CCAATGGAAGCCTCGCTAATCTCCTCCATGGTAATATTATGGAACT 815
> AT4G31240.1 | Symbols: | protein kinase C-like zinc finger protein
| chr4:15176455-15178768 REVERSE LENGTH=1708
Length=1708
Score = 665 bits (360), Expect = 0.0
Identities = 403/424 (95%), Gaps = 2/424 (0%)
Strand=Plus/Plus
Query 2358 CAGGCCTTGCAAGGACTTCACTCCAGAGCTGGTAAAACTCTACGAAAATCTTCA-AACCC 2416
|||||| |||||||||||||||||||||||| |||||||||||||||||||||| || ||
Sbjct 512 CAGGCCCTGCAAGGACTTCACTCCAGAGCTGATAAAACTCTACGAAAATCTTCAGAA-CC 570
Query 2417 GAGGAGAAGAACTCGAGATCATCTTTGTATCGTTTGATCATGATATGACTTTATTCTATG 2476
|||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||
Sbjct 571 GAGGAGAAGAACTCGAGATCATCTTTGTCTCATTTGATCATGATATGACTTCATTCTATG 630
Query 2477 AACATTTCTGGTGCATGCCATGGCTCGCAGTCCCCTTCAATTTAAACCTACTCAACAAAT 2536
||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||
Sbjct 631 AACATTTCTGGTGCATGCCATGGCTTGCAGTTCCCTTCAATTTAAGCCTACTCAACAAAT 690
Query 2537 TAAGGGACAAGTACAGAATTTCTCGTATCCCGTCACTGGTTCCTCTATATTCAGATGAAA 2596
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 691 TAAGGGACAAGTACGGAATTTCTCGTATCCCGTCACTGGTTCCTCTATATTCAGATGAAA 750
Query 2597 TCTCAGTCGCTGAAGATGTAATTGGTCTAATTGAAGATTATGGTCCTGAAGCATTTCCTT 2656
||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||
Sbjct 751 TCTCAGTCGCTGAAGATGTAATTGGTCTAATTGAAGACTATGGTTCTGAAGCCTTTCCTT 810
Query 2657 TCACTAAAAAGAGAAAAGAAGAACTCAAAGCTATCGATGACTCCAAACGCATTGGTGGAC 2716
||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||
Sbjct 811 TCACTAAAAAGCGAAAAGAAGAACTCAAAGCCATCGATGACTCCAAACGCCTTGGAGGAC 870
Query 2717 AATTGGAGAAACTCCTTACTCATGAGTCCCGAAATTACGTTGTTGCCAGAAATGGAAGTA 2776
| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 871 AGTTGGAGAAACTCCTTACTCACGAGTCCCGAAATTACGTTGTTGCCAGAAATGGAAGCA 930
Query 2777 AGGT 2780
||||
Sbjct 931 AGGT 934
Score = 174 bits (94), Expect = 4e-42
Identities = 98/100 (98%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 2180 TATCAACTGATTACCAAGTTAAGTTTCCTGAAAGTGGTGATCTTTACTCTATACTAGCAG 2239
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 355 TATCAGCTGATTACCAAGTTAAGTTTCCTGAAAGTGGTGATCTCTACTCTATACTAGCAG 414
Query 2240 CTGAAGGGATTGAGTTTCTTTTGTCGCATAGTGGAGAGGT 2279
||||||||||||||||||||||||||||||||||||||||
Sbjct 415 CTGAAGGGATTGAGTTTCTTTTGTCGCATAGTGGAGAGGT 454
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 139062765996
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5