BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg328615
Length=885
Score E
Sequences producing significant alignments: (Bits) Value
AT4G31020.2 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1458 0.0
AT2G24320.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 632 2e-180
> AT4G31020.2 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr4:15108101-15110147 REVERSE LENGTH=1491
Length=1491
Score = 1458 bits (789), Expect = 0.0
Identities = 853/885 (96%), Gaps = 0/885 (0%)
Strand=Plus/Plus
Query 1 ATGGGTAATGTGACGTCAAATGTGGCGGCCAAGTTTGCATTCTTCCCGCCGGAGCCAGCA 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 69 ATGGGTAATGTGACGTCAAATGTGGCGGCCAAGTTCGCATTCTTCCCGCCGGAGCCAGCA 128
Query 61 ACATACGGCGTAACGAAGGATGACGAGACAGGGAAGCTGGTCTTCGCCGGAGTGTCGGCG 120
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 129 ACATACGGCGTAACGAAGGATGACGAGACCGGGAAGCTGGTCTTCGCCGGAGTGTCGGCT 188
Query 121 GACAAGAACGTGGAAATCCACCAGCTCACCACAAAGTCCGGTAACAAAGTTGTTGCCACG 180
||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 189 GACAAGAACGTGGAAGTCCACCAACTCACCACAAAGTCCGGCAACAAAGTTGTTGCCACG 248
Query 181 TTCTGGAGACACCCTTTTGCGAGATTCACGCTTCTCTATTCCCATGGTAATGCTGCTGAT 240
|| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 249 TTTTGGAGACACCCTTTTGCGAGATTCACGCTTCTCTATTCCCATGGCAATGCCGCTGAT 308
Query 241 CTTGGCCAAATGGTCGAGCTCTTCATCGAGCTCCGTGCTCATCTACGCGTCAACATCATG 300
|||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||
Sbjct 309 CTTGGCCAAATGGTCGAGCTATTCATCGAACTCCGTGCTCATCTCCGCGTCAACATCATG 368
Query 301 AGTTATGATTATTCAGGCTATGGAGCTTCAACAGGAAAGCCGTCTGAATTCAACACATAT 360
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 369 AGTTATGATTATTCAGGATATGGAGCTTCAACAGGAAAGCCGTCTGAATTCAACACGTAT 428
Query 361 TATGACATAGAGGCAGTGTACAATTGCTTGAGGAGCGATTATGGGATCAAGCAAGAGGAG 420
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 429 TATGACATAGAGGCAGTGTACAGTTGCTTGCGGAGCGATTATGGGATCAAGCAAGAGGAG 488
Query 421 ATTATTCTGTACGGACAGTCTGTAGGAAGCGGTCCAACATTGCACATGGCTTCTCGGTTG 480
|| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 489 ATAATTCTGTACGGTCAGTCTGTAGGAAGCGGTCCAACGTTGCACATGGCTTCTCGGTTG 548
Query 481 AAGAGGCTGAGAGGAGTTGTTCTTCACAGCGCCATTCTCTCTGGAATTAGAGTCCTGTAT 540
|||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct 549 AAGAGGCTTAGAGGAGTTGTTCTTCACAGCGCCATTCTCTCTGGAATCAGAGTCTTGTAT 608
Query 541 CCTGTCAAAATGACGCTCTGGTTCGATATATTCAAAAACATAGACAAGATTCGCCATGTC 600
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 609 CCTGTCAAAATGACTCTCTGGTTCGATATATTCAAAAACATAGACAAGATTCGCCATGTC 668
Query 601 AACTCCCAAGTCCTTGTCATTCATGGCACAAATGATGAGATTGTTGATTTGTCTCACGGG 660
||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 669 AACTCACAAGTCCTTGTCATACATGGCACAAATGACGAGATTGTTGATTTGTCTCACGGG 728
Query 661 AAACGATTGTGGGAGCTGGCCAAGGAGAAGTACGATCCGTTATGGGTGAAGGGAGGAGGG 720
|||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 729 AAACGACTGTGGGAGCTGGCGAAGGAGAAGTATGATCCGTTATGGGTGAAGGGAGGAGGG 788
Query 721 CATTGCAACCTCGAGACTTACCCTGAGTACATCAAGCACCTCAAAAAGTTCGTAAACGCA 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 789 CATTGCAACCTCGAGACTTACCCTGAGTACATCAAGCACCTCAAAAAGTTCGTAAATGCA 848
Query 781 ATGGAGAAACTCTCTCTAACCAATCCACCACCCAAACAACTAACTAATGAGCCTAGTATA 840
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 849 ATGGAGAAACTCTCTCTAACCAATCCACCACCCAAACAACTAACTAATGAGCCCAGTATC 908
Query 841 ACCGAGACTAAGCACAATCGGTGCTTGAAATTCGGGAAACGGTAG 885
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 909 ACCGAGACTAAGCACAATCGGTGCTTGAAATTCGGGAAACGGTAG 953
> AT2G24320.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr2:10345421-10346829 REVERSE LENGTH=1099
Length=1099
Score = 632 bits (342), Expect = 2e-180
Identities = 696/865 (80%), Gaps = 31/865 (4%)
Strand=Plus/Plus
Query 23 TGGCGGCCAAGTTTGCATTCTTCCCGCCGGAGCCAGCAACATACGGCGTAACG-AAGGAT 81
|||| || ||||| || |||||||| || |||| ||||||||| ||| | || ||
Sbjct 2 TGGCTGCAAAGTTCGCTTTCTTCCCACC---GCCACCAACATACGACGT-GGGTAAAGAC 57
Query 82 GACGAGACAGGGAAGCTGGTCTTCGCC-GGAGTGTCGGCGGACAAGAA-CGTGGAAATCC 139
|| ||||| || ||||| | ||| || ||| | | | || || || | |||| | |
Sbjct 58 GAGGAGACCGGAAAGCTTATGTTCACCGGGA-TAACACCAGA-AAAAAGCATGGATGTTC 115
Query 140 ACCAGCTCACCA-CAAAGTCCGGTAACAAAGTTGTTGCCACGTTCTGGAGACACCCTTT- 197
| ||||| |||| |||| || || ||||| || |||||||||| |||| |||||||||
Sbjct 116 ATCAGCTTACCACCAAA-TCTGGCAACAAGGTCATTGCCACGTTTTGGAAACACCCTTTC 174
Query 198 TGCGAGATTCACGCTTCTCTATTCCCATGGTAATGCTGCTGATCTTGGCCAAATGGTCGA 257
| | |||||||| ||||| ||||| ||||| ||||| || ||||| ||||||||||| ||
Sbjct 175 T-CTAGATTCACTCTTCTTTATTCACATGGCAATGCCGCGGATCTCGGCCAAATGGTTGA 233
Query 258 GCTCTTCATCGAGCTCCGTGCTCATCTACGCGTCAACATCATGAGTTATGATTATTCAGG 317
|||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||||||
Sbjct 234 TCTCTTCATCGAGCTTCGAGCTCATCTCCGCGTCAACATTATGAGCTATGATTATTCAGG 293
Query 318 CTATGGAGCTTCAACAGGAAAGCCGTCTGAATTCAACACATATTATGACATAGAGGCAGT 377
|||||||||||||||||| ||||| |||| |||| || || ||||| || ||||| ||
Sbjct 294 CTATGGAGCTTCAACAGGCAAGCCAACTGAGCTCAATACGTACTATGATATCGAGGCTGT 353
Query 378 GTACAATTGCTTGAGGAGCGATTATGGGATCAAGCAAGAGGAGATTATTCTGTACGGACA 437
||||||||||||||||| ||| || ||||||| ||||||||| || ||||| || || ||
Sbjct 354 GTACAATTGCTTGAGGACCGAGTACGGGATCATGCAAGAGGAAATGATTCTATATGGTCA 413
Query 438 GTCTGTAGGAAGCGGTCCAACATTGCACATGGCTTCTCG-GTTGAAGAGGCTGAGAGG-A 495
|| || |||||||| |||||||||||| | || ||||| || ||||| || ||||| |
Sbjct 414 ATCCGTTGGAAGCGGACCAACATTGCACTTAGCATCTCGAGTA-AAGAGACTAAGAGGGA 472
Query 496 GTTGTTCTTCACAGCGCCATTCTCTCTGGAATTAGAGTCCTGTATCCTGTCAAAATGACG 555
|||||||||| ||||| |||||||| || | ||||| ||||||||||||||||||||
Sbjct 473 -TTGTTCTTCATAGCGCAATTCTCTCCGGCCTCAGAGTTCTGTATCCTGTCAAAATGACA 531
Query 556 CTCTGGTTCGATATATTCAAAAACATAGACAAGATTCGCCATGTCAAC-T-CCCAAGTCC 613
||||||||||||| | ||||||||| |||||||| |||||||| ||| | ||| || |
Sbjct 532 TTCTGGTTCGATATGTACAAAAACATTGACAAGATACGCCATGT-AACATGCCCT-GTTC 589
Query 614 TTGTCATTCATGGCACAAATGATGAGATTGTTGATT-TGTCTCACGGGAAACGATTGTGG 672
||||||| ||||| ||||| ||||| ||||| || | |||| || ||||| |||||||||
Sbjct 590 TTGTCATACATGGAACAAAAGATGATATTGT-GAATATGTCACATGGGAAGCGATTGTGG 648
Query 673 GAGCTGGCCAAGGAGAAGTACGATCCGTTATGGGTGAAGGGAGGAGGGCATTGCAACCTC 732
|| || || ||||| ||||| ||||| || ||||| || |||||||||||||||||| |
Sbjct 649 GAACTAGCAAAGGACAAGTATGATCCATTGTGGGTAAAAGGAGGAGGGCATTGCAACTTG 708
Query 733 GAGACTTACCCTGAGTACATCAAGCACCT-CAAAAAGTTCGTAAACGCAATGGAGAAACT 791
|| || ||||| |||||||||||||| | | ||| |||| | ||||| |||||||||||
Sbjct 709 GAAACATACCCCGAGTACATCAAGCATATGCGAAA-GTTCATGAACGCCATGGAGAAACT 767
Query 792 CTCTCT-AACCAATCCACCACCCAAACAACTAA-CTAATGAGCCTAGTAT-AACCGAGAC 848
| |||| ||| ||||||||| |||||||| || | | ||||| || || || || ||
Sbjct 768 CGCTCTCAAC-AATCCACCAAACAAACAACAAAACGAC-GAGCCAAGCATCAAG-GAAAC 824
Query 849 TAAGCACAATCGGTGCTTGAAATTC 873
||| || ||||||||||||| ||||
Sbjct 825 TAAACAAAATCGGTGCTTGAGATTC 849
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 43201366420
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5