BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg328660
Length=2202
Score E
Sequences producing significant alignments: (Bits) Value
AT4G30560.1 | Symbols: ATCNGC9, CNGC9 | cyclic nucleotide gated... 3557 0.0
AT2G23980.1 | Symbols: ATCNGC6, CNGC6 | cyclic nucleotide-gated... 1816 0.0
> AT4G30560.1 | Symbols: ATCNGC9, CNGC9 | cyclic nucleotide gated
channel 9 | chr4:14926834-14930156 REVERSE LENGTH=2395
Length=2395
Score = 3557 bits (1926), Expect = 0.0
Identities = 2111/2203 (96%), Gaps = 2/2203 (0%)
Strand=Plus/Plus
Query 1 ATGTTAGACTGTGCCAAAAAAGCAGTGAAATCACAAGTAATCAGTGGCCATCTCGAGAAA 60
||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 54 ATGTTAGACTGTGGCAAAAAAGCAGTCAAATCACAAGTAATCAGTGGCCGTCTCGAGAAG 113
Query 61 TTTGTAAGGTTGGATAGTATGGATTCTAGGTACTCTCAGACTTCTGATGCTGGTCTAAAC 120
||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct 114 TTTGTAAGGTTGGATAGTATGGATTCTAGGTACTCGCAGACTTCTGATACTGGTCTAAAC 173
Query 121 AGATGCACTCTCAATCTACAAGGACCAACACGTGGTGGTGGTGCTCAGGGCAACAATGTT 180
||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 174 AGATGCACTCTCAATTTACAAGGACCAACACGTGGTGGTGGTGCTCAGGGAAACAATGTA 233
Query 181 TCTTCTGGTTCCTTTAAGAAAGGATTTAGAAAAGGCTCTAAAGGTCTTTGGTCTATAGGT 240
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 234 TCTTCTGGTTCCTTTAAGAAAGGGTTTAGAAAAGGTTCTAAAGGTCTTTGGTCTATAGGA 293
Query 241 AGATCAATTGGTTTGGGGGTTTCACGAGCAGTTTTTCCTGAAGATCTTAAAGTATCAGAG 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 294 AGATCAATTGGTTTAGGGGTTTCACGAGCAGTTTTTCCTGAAGATCTTAAAGTATCAGAG 353
Query 301 AAGAAGATTTTTGATCCACAGGACAAGTTTCTTTTGCTCTGCAACAAGCTGTTTGTTACT 360
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 354 AAGAAGATTTTTGATCCACAGGACAAGTTTCTTTTGCTCTGTAACAAACTGTTTGTTACT 413
Query 361 TCTTGCATTCTCGCTGTGTCTGTGGATCCGCTCTTCTTGTATCTTCCTTTTGTTAAGGAT 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 414 TCTTGCATTCTCGCTGTGTCTGTGGATCCGCTCTTCTTGTATCTTCCGTTTGTTAAGGAT 473
Query 421 AATGAGAAATGTATCGGTATAGACCGG-AGATTGGCTATCATAGCAACAACACTGCGGAC 479
||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||||
Sbjct 474 AATGAGAAATGTATCGGTATAGACCGGAAG-TTGGCTATTATAGCAACAACGCTGCGGAC 532
Query 480 AGTGATCGATGCGTTTTATCTTTTTCATATGGCTCTTCGGTTTAGGACAGCTTTTGTCGC 539
||| || |||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 533 AGTAATTGATGCGTTTTATCTTTTTCACATGGCTCTTCGGTTTAGAACAGCTTTTGTCGC 592
Query 540 CCCTTCTTCTAGGGTTTTTGGGCGAGGCGAACTTGTGATCGACCCTGCACAGATAGCAAA 599
|||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 593 CCCTTCTTCTCGGGTTTTTGGTCGAGGCGAACTTGTGATTGACCCTGCACAGATAGCAAA 652
Query 600 ACGGTATTTGCAGCAGTATTTCATCATTGACTTTCTCTCTGTGCTTCCGCTTCCACAGAT 659
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 653 ACGTTATTTGCAGCAGTATTTCATCATTGACTTTCTCTCTGTGCTTCCACTTCCACAGAT 712
Query 660 TGTAGTTTGGAGATTTCTTGGCATCTCTGGAGGTGCAAGTGTGCTGGCAACAAAGCGGGC 719
||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||
Sbjct 713 TGTAGTTTGGAGATTTCTTTACATCTCTAAAGGTGCAAGTGTGCTAGCAACAAAGCGGGC 772
Query 720 GTTGCGATCGATCATTTTACTTCAATATATTCCGAGGTTCATTCGGCTATATCCTTTGAG 779
|||||||| ||||||||| ||||||||||||| || ||||||||| | |||||||||||
Sbjct 773 ATTGCGATCTATCATTTTAGTTCAATATATTCCAAGATTCATTCGGTTGTATCCTTTGAG 832
Query 780 CTCAGAGTTAAAGAGAACAGCTGGTGTTTTTGCTGAAACTGCTTGGGCTGGTGCAGCTTA 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 833 CTCAGAGTTAAAGAGAACAGCTGGTGTTTTTGCTGAAACTGCTTGGGCTGGTGCAGCTTA 892
Query 840 TTACTTGCTACTCTACATGCTCGCAAGTCATATTGTTGGGGCTTTATGGTACTTATTGGC 899
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 893 TTACTTGCTACTCTACATGCTCGCAAGCCATATTGTTGGGGCTATATGGTACTTATTGGC 952
Query 900 CTTAGAACGCTATAATGGATGCTGGAGCAAGGCTTGCGGTAATAATAGCCTGGACTGTCA 959
||| ||||| |||||||||||||||| ||||| |||| |||||| ||| ||||||||||
Sbjct 953 CTTGGAACGTTATAATGGATGCTGGACCAAGGTTTGCAGTAATAGCAGCTTGGACTGTCA 1012
Query 960 AAGAAACTTCCTGTTTTGTGGTAATGAAAATATGGATGGTTATGCAGCTTGGTCTACCAT 1019
||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct 1013 CAGAAACTTCCTGTTTTGTGGTAATGAAAAAATGGATGGTTATGCAGCTTGGACTACCAT 1072
Query 1020 CAAAGATTCTGTTCTTCAAACAAATTGTCCAGTTAATACAACCGATAATCCTCCTTTTGA 1079
||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 1073 CAAAGATTCTGTTCTGCAATTAAATTGCCCAGTTAATACAACCGATAATCCTCCTTTTGA 1132
Query 1080 TTTCGGAATCTACTTAAGAGCCCTGTCCTCTGGCATTGTCTCATCTAAGAGCTTTGTCTC 1139
||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1133 TTTTGGGATCTACTTAAGAGCCTTGTCCTCTGGCATTGTCTCATCTAAGAGCTTTGTCTC 1192
Query 1140 TAAGTACTTCTTCTGTTTATGGTGGGGACTTCAGAATCTCAGCACTCTTGGTCAAGGGCT 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1193 TAAGTACTTCTTCTGTTTATGGTGGGGACTTCAGAATCTCAGCACTCTTGGTCAAGGGCT 1252
Query 1200 TCAAACCAGTACATACCCTGGAGAGGTTATATTCTCCATAGCACTTGCTATTGCTGGACT 1259
| ||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1253 TGAAACCAGCACATACCCTGGAGAAGTTATATTCTCCATAGCACTTGCCATTGCTGGACT 1312
Query 1260 TCTTCTCTTTGCTCTTCTTATTGGAAACATGCAGACTTATCTTCAATCCCTTACTATACG 1319
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 1313 TCTTCTCTTTGCTCTTCTTATTGGAAACATGCAGACTTATCTTCAATCCCTTACAATCCG 1372
Query 1320 GCTTGAAGAAATGAGAGTGAAAAGACGCGACTCAGAACAGTGGATGCGTCATCGAATGCT 1379
||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||
Sbjct 1373 GCTTGAAGAAATGAGAGTGAAAAGACGTGATTCAGAACAGTGGATGCATCATCGAATGCT 1432
Query 1380 TCCACCAGAACTGCGGGAACGAGTCAGACGATATGACCAGTACAAATGGTTGGAGACACG 1439
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1433 TCCACCGGAACTGCGAGAACGAGTCAGACGATATGACCAGTACAAATGGTTGGAGACACG 1492
Query 1440 CGGAGTTGATGAAGAGAACTTGGTTCAGAACCTCCCAAAGGATCTGAGAAGAGATATCAA 1499
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1493 CGGAGTTGATGAAGAGAATTTGGTTCAGAACCTCCCAAAGGATCTGAGAAGAGATATCAA 1552
Query 1500 ACGCCATCTCTGTCTGGCTTTGGTTCGGAGGGTTCCATTGTTTGAGAATATGGATGAGAG 1559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1553 ACGCCATCTCTGTCTGGCTTTGGTTCGGAGGGTTCCATTGTTTGAGAATATGGATGAGAG 1612
Query 1560 GCTGCTCGATGCAATTTGTGAGCGGTTGAAGCCGTGTCTGTACACGGAGAGCTCTTATTT 1619
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1613 GCTGCTCGATGCAATCTGTGAGCGGTTGAAGCCGTGTCTGTACACAGAGAGCTCTTATTT 1672
Query 1620 GGTTCGGGAAGGAGACCCGGTTAATGAGATGCTCTTCATTATCCGTGGTCGGCTTGAGAG 1679
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1673 GGTTCGGGAAGGCGACCCGGTTAACGAGATGCTCTTCATTATCCGTGGTCGGCTTGAGAG 1732
Query 1680 TGTGACCACCGATGGCGGAAGAAGTGGTTTCTTCAACCGCAGTTTGCTTAAAGAAGGAGA 1739
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1733 TGTGACCACCGATGGCGGAAGAAGCGGTTTCTTCAACCGCAGTTTGCTTAAAGAAGGAGA 1792
Query 1740 TTTCTGTGGGGAAGAGCTTTTGACATGGGCACTTGATCCCAAATCCGGATCCAACCTACC 1799
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1793 TTTCTGTGGGGAAGAGCTTTTGACATGGGCACTTGATCCCAAATCTGGTTCCAACCTACC 1852
Query 1800 ATCCTCTACCAGAACCGCAAAGGCTCTAACTGAAGTAGAGGCTTTTGCTTTGATAGCCGA 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1853 ATCCTCTACCAGAACCGCAAAGGCTCTAACTGAAGTAGAGGCTTTTGCTTTGATAGCAGA 1912
Query 1860 TGAGCTTAAATTTGTGGCTAGCCAGTTCAGGAGACTACACAGCAGGCAAGTTCAACACAC 1919
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1913 TGAGCTCAAATTTGTGGCTAGCCAGTTCAGAAGACTACACAGCAGGCAAGTTCAACACAC 1972
Query 1920 ATTCAGATTCTACTCACAACAATGGAGGACTTGGGCTGCTATTTTCATACAAGCGGCATG 1979
||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| || ||
Sbjct 1973 ATTCAGATTCTACTCGCAACAATGGAGAACTTGGGCTGCTATCTTCATACAAGCCGCGTG 2032
Query 1980 GCGACGATATGTgaagaagaagaaacttgagcaactcaggaaagaagaagaagaaggaga 2039
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2033 GCGACGATACGTGAAGAAGAAGAAACTTGAGCAACTCAGGAAAGAAGAAGAAGAAGGAGA 2092
Query 2040 agGATCAGTTACTAGCATCAGAGCGACGTTCCTGGCTTCAAAGTTTGCTGCAAATGCACT 2099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2093 AGGATCAGTTACTAGCATCAGAGCGACGTTCCTGGCTTCAAAGTTTGCTGCAAATGCACT 2152
Query 2100 TCGTAAAGTTCACAAGAACCGTATTGAAGCAAAGTCTACTAAAGAACTTGTGAAATATCA 2159
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2153 TCGTAAAGTTCACAAGAACCGTATTGAAGCAAAGTCTACTATAGAACTTGTGAAATATCA 2212
Query 2160 GAAGCCTTCAGAACCTGATTTCTCTGCTGATGATCCTTGTTGA 2202
|||||||||||||||||||||||||||||||||| || |||||
Sbjct 2213 GAAGCCTTCAGAACCTGATTTCTCTGCTGATGATACTAGTTGA 2255
> AT2G23980.1 | Symbols: ATCNGC6, CNGC6 | cyclic nucleotide-gated
channel 6 | chr2:10201104-10204467 REVERSE LENGTH=2516
Length=2516
Score = 1816 bits (983), Expect = 0.0
Identities = 1714/2061 (83%), Gaps = 74/2061 (4%)
Strand=Plus/Plus
Query 18 AAAAGCAGTGAAATCACAAGTAATCAGTGGCCATCTCGAGAAATTTGTAAGGTTGGATAG 77
||||| ||| ||||| ||||| ||||||||||| | |||||| ||||| ||||| |||||
Sbjct 121 AAAAGGAGTCAAATCTCAAGTCATCAGTGGCCAACGCGAGAACTTTGTGAGGTTAGATAG 180
Query 78 TATGGATTCTAGGTACTCTCAGACTTCTGATGCTGGTCTAAACAGATGCAC-TCTCAATC 136
|||||| || |||||||| || | ||| || | |||||||||| |||||| | | |||
Sbjct 181 TATGGACTCAAGGTACTCGCAAAGTTCCGAAACGGGTCTAAACAAATGCACAT-TGAATA 239
Query 137 TAC-A--AGGACC-AACACGTGGTGGTGGTGCTCAGGGCAA-CAATGTTTCTTCTGGTTC 191
||| | |||||| || |||| | | |||||| || || ||| | || ||||| ||
Sbjct 240 TACAAGGAGGACCTAA-ACGT--T--T--TGCTCAAGG-AAGCAAAGCATCATCTGGATC 291
Query 192 CTTTAAGAAAGGATTTAGAAAAGGCTCTA-AAGGTCTTTGGTCTATAGGTAGATCAATTG 250
||||||||||| ||||||||||| || | | || ||||||||||||||| |||| ||||
Sbjct 292 TTTTAAGAAAGGGTTTAGAAAAGGATC-AGAGGGGCTTTGGTCTATAGGTCGATCGATTG 350
Query 251 GTTTGGGGGTTTCACGAGCAGTTTTTCCTGAAGATCTTAAAGTATCAGAGAAGAAGATTT 310
| | || ||||| || || || ||||| ||||||||| ||||||||||||||||||| |
Sbjct 351 GACTCGGTGTTTCGCGCGCTGTGTTTCCAGAAGATCTTGAAGTATCAGAGAAGAAGATAT 410
Query 311 TTGATCCACAGGACAAGTTTCTTTTGCTCTGCAACAAGCTGTTTGTTACTTCTTGCATTC 370
|||||||||| |||||||||||||| |||||||||||| |||| || |||| || || |
Sbjct 411 TTGATCCACAAGACAAGTTTCTTTTACTCTGCAACAAGTTGTTCGTCGCTTCGTGTATAC 470
Query 371 TCGCTGTGTCTGTGGATCCGCTCTTCTTGTATCTTCCTTTTGTTAAGGATAATGAGAAAT 430
|||| || || || ||||| |||||||||||||||||||| |||| ||||| | |||||
Sbjct 471 TCGCAGTATCCGTTGATCCTCTCTTCTTGTATCTTCCTTTCATTAATGATAAAGCGAAAT 530
Query 431 GTATCGGTATAGACCGGAGATTGGCTATCATAGCAACAACACTGCGGACAGTGATCGATG 490
|| | |||||||| |||| | ||||||| |||| ||| ||| | ||||||| || |||
Sbjct 531 GTGTTGGTATAGATCGGAAACTGGCTATTATAGTAACTACAATAAGGACAGTTATAGATT 590
Query 491 CGTTTTATCTTTTTCATATGGCTCTTCGGTTTAGGACAGCTTTTGTCGC-CCCTTCTTCT 549
|||||||||| |||||||||||||| |||||||| ||||||| ||| || ||| || ||
Sbjct 591 CGTTTTATCTCTTTCATATGGCTCTACGGTTTAGAACAGCTTATGTTGCTCCC-TCGTC- 648
Query 550 A-GGGTTTTTGGGCGAGGCGAACTTGTGATCGACCCTGCACAGATAGCAAAACGGTATTT 608
| |||||||||| || || || ||||| || ||||| || |||||||| || |||||| |
Sbjct 649 ACGGGTTTTTGGCCGCGGAGAGCTTGTTATAGACCCGGCGCAGATAGCTAAGCGGTATCT 708
Query 609 GCAGCAGTATTTCATCATTGACTTT-CTCTCTGTGCTTCCGCTTCCACAGATTGTAGTTT 667
||| ||||||||||||||||| ||| || ||||| |||||| ||||||||||| ||||||
Sbjct 709 GCAACAGTATTTCATCATTGA-TTTACTTTCTGTTCTTCCGGTTCCACAGATTATAGTTT 767
Query 668 GGAGATTTCTTGGC-AT-C-TCTG-GAGGTGC-AAGTGTGCTGGCAACAAAGCGGGC-GT 721
||||| ||| | | || | || | | ||||| || ||| ||||| ||||| | || |
Sbjct 768 GGAGA-TTCCT--CTATACTTC-GAGGGGTGCGAA-TGTACTGGCGACAAAACAAGCACT 822
Query 722 TGCGATCGATCATTTTACTTCAATATATTCCGAGG-TTCATTCGGCTATATCCTTTGAGC 780
| ||| ||| ||||| |||| ||||||||| || ||| |||| | |||||||| ||
Sbjct 823 T-AGATATATCGTTTTAGTTCAGTATATTCCGCGGTTTC-TTCGAATGTATCCTTTAAGT 880
Query 781 TCAGAGTTAAAGAGAACAGCTGGTGTTTTTGCTGAAACTGCTTGGGCTGGTGCAGCTTAT 840
||||| | |||||||| || || || || ||||||||||| ||||| |||||||| ||
Sbjct 881 TCAGAACTGAAGAGAACTGCCGGGGTATTCGCTGAAACTGCGTGGGCGGGTGCAGCGTAC 940
Query 841 TACTTGCTACTCTACATGCTCGCAAGTCATATTGTTGGGGCTTTATGGTACTT-ATTGGC 899
|||||| | || |||||||||||||||||||||||||||||||| ||||| || || ||
Sbjct 941 TACTTGTTGCTTTACATGCTCGCAAGTCATATTGTTGGGGCTTTGTGGTATTTGCTT-GC 999
Query 900 CTTAGAACGCTATAATGGA-TGCTGGAGCAAGGCTTGCGGTAATAATAGCCTGGACTGTC 958
||||||||| |||| || || ||||| ||||||||| | |||| || | |||||
Sbjct 1000 TTTAGAACGCAATAA-CGACTGTTGGAGTAAGGCTTGC---CACAATAACCAGAACTGT- 1054
Query 959 A-AAGAAACTTCCTGTTTTGTGGTAATGAAAATATGGATGGTTATGCAGCTT-GGTCTAC 1016
| ||||||||| ||||||||||||| |||||||| | |||||||| |||| || | |
Sbjct 1055 ACTAGAAACTTCTTGTTTTGTGGTAACCAAAATATGAAAGGTTATGCTGCTTGGGAC-AA 1113
Query 1017 CATCAAAGATTCTGT-TCTTCAAAC-AAATTGTCCAGTTAAT-ACAACC---GAT--A-A 1067
|| |||| ||| || ||||| ||| ||| || || || ||| | || ||| | |
Sbjct 1114 TATTAAAGTTTC-GTATCTTC-AACTAAAGTGCCCTGTCAATGTC-CCCGAAGATGAAGA 1170
Query 1068 TCCTCCTTTTGATTTCGGAATCTACTTAAGAGCCCTGTCCTCTGGCATTGTCTCATCTAA 1127
|||||||||||||| ||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct 1171 ACCTCCTTTTGATTTTGGAATCTACTTAAGAGCACTCTCCTCTGGCATCGTCTCGTCTAA 1230
Query 1128 GAGCTTTGTCTCTAAGTACTTCTTCTGTTTATGGTGGGGACTTCAGAATCTCAGCACTCT 1187
|| ||||||||||||||||||||||||||| ||||||||||| |||||||| || || ||
Sbjct 1231 GAACTTTGTCTCTAAGTACTTCTTCTGTTTGTGGTGGGGACTACAGAATCTTAGTACACT 1290
Query 1188 TGGTCAAGGGCTTCAAACCAGTACATACCCTGGAGAGGTTATATTCTCCATAGCACTTGC 1247
||||||||||||| ||||||| ||||| |||||||||||||||||||| ||| |||||||
Sbjct 1291 TGGTCAAGGGCTTGAAACCAGCACATATCCTGGAGAGGTTATATTCTCTATAACACTTGC 1350
Query 1248 TATTGCTGGACTTCTTCTCTTTGCTCTTCTTATTGGAAACATGCAGACTTATCTTCAATC 1307
||||||||||||||| || ||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1351 TATTGCTGGACTTCTACTATTTGCACTTCTCATTGGAAACATGCAGACTTATCTTCAATC 1410
Query 1308 CCTTACTATACGGCTT-GAAGAAATGAGAGTGAAAAGACGCGACTCAGAACAGTGGATGC 1366
||||| || ||| || ||||||||| |||| |||||||| |||||||||||||||||||
Sbjct 1411 GCTTACCATTCGG-TTAGAAGAAATGCGAGTAAAAAGACGTGACTCAGAACAGTGGATGC 1469
Query 1367 GTCATCGAATGCTTCCACCAGAACTGCGGGAACGAGTCAGACGATATGACCAGTACAAAT 1426
||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
Sbjct 1470 ATCATCGAATGCTTCCACCAGAACTGCGGGAACGGGTTAGACGATATGACCAGTACAAGT 1529
Query 1427 GGTTGGAGACACGCGGAGTTGATGAAGAGAA-CTTGGTTCAGAACCTCCCAAAGGATCTG 1485
|||||||||| || ||||||||||||||||| |||| ||||||| ||||||||||||||
Sbjct 1530 GGTTGGAGACGCGTGGAGTTGATGAAGAGAATCTTG-TTCAGAATCTCCCAAAGGATCTT 1588
Query 1486 AGAAGAGATATCAAACGCCATCTCTGTCTGGCTTTGGTTCGGAGGGTTCCATTGTTTGAG 1545
||||||||||||||||| ||||||||||| || || || || || |||||||||||||||
Sbjct 1589 AGAAGAGATATCAAACGTCATCTCTGTCTCGCGTTAGTCCGAAGAGTTCCATTGTTTGAG 1648
Query 1546 AATATGGATGAGAGGCTGCTCGATGCAATTTGTGAGCGG-TTGAAGCCGTGTCTGTACAC 1604
|||||||||||||||||| | |||||||| |||||| || || ||||| ||||||| |||
Sbjct 1649 AATATGGATGAGAGGCTGTTAGATGCAATCTGTGAGAGGCTT-AAGCCATGTCTGTTCAC 1707
Query 1605 GGAGA-GCTCTTATTTGGTTCGGGAAGGAGACCCGGTTAATGAGATGCTCTTCATTATCC 1663
|||| | || || |||||||| || ||||| || || || |||||||||||||||||||
Sbjct 1708 TGAGAAG-TCGTACTTGGTTCGTGAGGGAGATCCAGTCAACGAGATGCTCTTCATTATCC 1766
Query 1664 GTGGTCGGCTTGAGAGTGTGACCACCGATGGCGGAAGAAGTGGTTTCTTCAACCGCAGTT 1723
||||| |||| || ||||| ||||| |||||||| ||||| || |||| |||||| ||||
Sbjct 1767 GTGGTAGGCTCGAAAGTGTAACCACTGATGGCGGTAGAAGCGGATTCTACAACCGGAGTT 1826
Query 1724 TGCTTAAAGAAGGAGATTTCTGTGGGGAAGAGCTTTTGACATGGGCACTTGATCCCAAAT 1783
| |||||||||||||||||||| || || ||||||||||||||||| |||||||||||||
Sbjct 1827 TACTTAAAGAAGGAGATTTCTGCGGTGACGAGCTTTTGACATGGGCGCTTGATCCCAAAT 1886
Query 1784 CCGGATCCAACCTACCATCCTCTACCAGAACCGCAAAGGCTCT-AACTGAAGTAGAGGCT 1842
|||| || ||||| || |||||||| ||||||| ||||| || ||| ||||| || |||
Sbjct 1887 CCGGTTCTAACCTCCCTTCCTCTACAAGAACCGTGAAGGC-CTTAACCGAAGTGGAAGCT 1945
Query 1843 TTTGCTTTGATAGCCGATGAGCTTAAATTTGTGGCTAGCCAGTTCAGGAGACTACACAGC 1902
|| ||| |||||||||||||||| ||||| ||||| ||||||||||||||||| || |||
Sbjct 1946 TTCGCTCTGATAGCCGATGAGCTGAAATTCGTGGCAAGCCAGTTCAGGAGACTCCATAGC 2005
Query 1903 AGGCAAGTTCAACACACATTCAGATTCTACTCACAACAATGGAGGACTTGGGCTGCTATT 1962
|| ||||| |||||||| ||||||||||| ||||| ||||||||||||||||| ||| |
Sbjct 2006 AGACAAGTACAACACACGTTCAGATTCTATTCACAGCAATGGAGGACTTGGGCCGCT-TG 2064
Query 1963 -TTCATACAAGCGGCATGGCGACGATATGTgaagaagaagaaacttg-agcaactcagga 2020
||||| ||||| ||||||||||| || | |||| ||||||| ||| ||||||| || |
Sbjct 2065 CTTCATGCAAGCAGCATGGCGACGGTACATAAAGAGGAAGAAA-TTGGAGCAACTTAGAA 2123
Query 2021 aagaagaagaagaaggagaag 2041
||||||| ||||||| |||||
Sbjct 2124 AAGAAGAGGAAGAAGAAGAAG 2144
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 109236385920
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5