BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg328819 Length=825 Score E Sequences producing significant alignments: (Bits) Value AT4G28770.2 | Symbols: | Tetraspanin family protein | chr4:142... 1205 0.0 AT2G20230.1 | Symbols: | Tetraspanin family protein | chr2:872... 473 9e-133 > AT4G28770.2 | Symbols: | Tetraspanin family protein | chr4:14211855-14213969 REVERSE LENGTH=1373 Length=1373 Score = 1205 bits (652), Expect = 0.0 Identities = 787/848 (93%), Gaps = 25/848 (3%) Strand=Plus/Plus Query 1 ATGCGACACAATTGTTGCCATGTCTCGTTCGCTTCCATTCTCAAGATCCTCAATTTTCTC 60 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 206 ATGCGACACAATTGTTGCCATGTCTCGTTCGCTTCGATTCTCAAGATCCTTAATTTTCTC 265 Query 61 CAAGCTTTCATCGGTATCTCAATCATAATCTACTCGATTTGGATGCTCGATCAATATAAC 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 266 CAAGCTTTCATCGGTATATCAATCATAATCTACTCGATTTGGATGCTCGATCAATACAAT 325 Query 121 CATCACGTTCCCGTTGATCCTCCTCCGTCTCAGCCTCCGGCGGCTTCATCTCCGGA---T 177 ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| | Sbjct 326 CATCACGTTCCCGTTGACCCTCCTCCGTCTCAGCCTCCGGCAGCTTCATCACCGGATTCT 385 Query 178 TC---TT-CTTCT-T-ATTCAAGAATTGAGATCAACAGTGTTTCTGATTCTTTGAAGAAT 231 || || ||||| | |||||| ||||||||||||||||||||||||||||||||||||| Sbjct 386 TCTTATTCCTTCTCTAATTCAATAATTGAGATCAACAGTGTTTCTGATTCTTTGAAGAAT 445 Query 232 CCGATTAATCTCGTATCGGGTATCG-T-TC---TC-------GGAGATTCGGGTTTCAAT 279 ||||| || ||||||||||||||| | || || |||||||||||||||||| Sbjct 446 CCGATCGATTTCGTATCGGGTATCGTTCTCGGGTCTGGTGGTGGAGATTCGGGTTTCAAT 505 Query 280 CTCCGTTCCTTAGATCTTCCTGCTCCATGGTTTATTTACTCTTTCATGGCCATTGGGATT 339 |||||||| |||||||||||||||||||||||||| |||| ||||||||| ||||||||| Sbjct 506 CTCCGTTCTTTAGATCTTCCTGCTCCATGGTTTATCTACTGTTTCATGGCGATTGGGATT 565 Query 340 TTGGTCTGCATTGTCACTATCATCGGTTTCATTGCAGCTGAAGCTATCAATGGATGTTGC 399 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 566 TTGGTCTGCATTGTCACTATCATTGGTTTCATTGCAGCTGAAGCTATCAATGGATGTTGC 625 Query 400 TTGTGTTTCTATTCAATTCTCAAAACTCTTCTGATCAT-ACTCGAAGCAGCTCTTGTGGG 458 |||||||||||||||||||||||||||||| | ||||| | ||||||||||||| ||||| Sbjct 626 TTGTGTTTCTATTCAATTCTCAAAACTCTTTTAATCATTA-TCGAAGCAGCTCTAGTGGG 684 Query 459 ATAT-ATAGCCATTGACCGTCACTGGGAAAAGGATCTTCCTTATGATCCAACTGGAGAAC 517 || | |||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 685 AT-TCATAGTGATTGACCGTCACTGGGAGAAGGATCTTCCTTATGATCCAACTGGAGAAC 743 Query 518 TCAATAGTCTTCGAGCTTTCATAGAAGAAAACATCGATATTTGCAAATGGGTCGGGATTG 577 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 744 TCAATAGTCTTCGAGCTTTCATCGAAGAAAACATCGATATTTGCAAATGGGTCGGAATTG 803 Query 578 TTGTGGTAGCGATCCAGTTACTGTCATTGCTACTGGCTTTGGTTTTGAGAGCTATGGTTT 637 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 804 TTGTGGTAGCCATCCAGTTACTGTCATTGCTACTGGCTTTGGTTTTGAGAGCTATGGTTT 863 Query 638 CACCCCGACAATCAGAGCTTGATGATGAGGATGATTTTGAGAATCCAATGAGTAGAGCAA 697 |||| || |||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 864 CACCTCGGCAATCAGAGCTTGATGATGAAGATGATTTTGAGAATCCGATGAGTAGAGCAC 923 Query 698 GAGAGAATCTTCTTGGTCCACAGGCAAACCAGACATCTTCTGGATCAAGCAATATTGACA 757 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 924 GAGACAATCTTCTTGGTCCACAGGCAAACCAGACATCTTCTGGATCAAGCAATATTGACA 983 Query 758 ATTGGAGGTCCCGAATCAGAGAGAAGTACGGATTGATCAACGGTCAGAGCCAGAATCCAT 817 | ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct 984 ACTGGAGGTCCCGAATCAGAGAGAAGTACGGATTGATCAACAGTCAGAGCCACACTCCAT 1043 Query 818 CAGCTTAA 825 |||||||| Sbjct 1044 CAGCTTAA 1051 > AT2G20230.1 | Symbols: | Tetraspanin family protein | chr2:8725541-8727742 FORWARD LENGTH=1388 Length=1388 Score = 473 bits (256), Expect = 9e-133 Identities = 442/531 (83%), Gaps = 15/531 (3%) Strand=Plus/Plus Query 270 GGGTTTCAATCTCCGTTCCTTAGATCTTCCTGCTCCATGGTTTATTTACTCTTTCATGGC 329 |||||| || || || || || || ||||||||||||||||| || |||||||||||||| Sbjct 480 GGGTTT-AACCTACGCTCGTTGGACCTTCCTGCTCCATGGTTCATCTACTCTTTCATGGC 538 Query 330 CATTGGGATTTTGGTCTGCATTGTCA-CTATCATCGGTTTCATTGCAGCTGAAGCTATCA 388 |||| || |||||||||||||| | || |||| |||||||| ||||||||||| |||| Sbjct 539 GGTTGGTATATTGGTCTGCATTGTTACCT-TCATTGGTTTCATAGCAGCTGAAGCAATCA 597 Query 389 ATGGATGTTGCTTGTGTTTCTATTCAATTCTCAAAACTCTTCTGA-TCATACTCGAAGCA 447 |||| |||||||||||||| || || |||||||||||||| || | || |||| ||||| Sbjct 598 ATGGCTGTTGCTTGTGTTTTTACTCTATTCTCAAAACTCTGCTCATTC-TACTTGAAGCT 656 Query 448 GCTCTTGTGGGATATATAGCCATTGACCGTCACTGGGAAAAGGATCTTCCTTATGATCCA 507 || ||||| | ||| || || ||||||||||||||||||||||||||||| ||||||||| Sbjct 657 GCACTTGTTGCATACATCGCTATTGACCGTCACTGGGAAAAGGATCTTCCGTATGATCCA 716 Query 508 ACTGGAGAACTCAATAGTCTTCGAGCTTTCATAGAAGAAAACATCGATATTTGCAAATGG 567 ||||||||||| | ||||||| | |||||||| ||||||||||||||||| ||||||||| Sbjct 717 ACTGGAGAACTTAGTAGTCTTAGGGCTTTCATTGAAGAAAACATCGATATATGCAAATGG 776 Query 568 GTCGGGATTGTTGTGGTAGC-GATCCAGTTACTGTCATTGCTACTGGCTTTGGTTTTGAG 626 || ||||||| ||||||||| | ||||| |||||||||||||||| || ||||| | || Sbjct 777 GTGGGGATTGCTGTGGTAGCAG-TCCAGCTACTGTCATTGCTACTAGCCATGGTTCTCAG 835 Query 627 AGCTATGGTTTCA-CCCCGACAATCAGAGCTTGATGATGAGGATGATTTTGAGAATCCAA 685 ||| ||||||||| |||||| || | || ||||| || ||||| ||| |||||| |||| Sbjct 836 AGCGATGGTTTCAACCCCGA-AACCCGAACTTGACGAAGAGGAAGATGATGAGAACCCAA 894 Query 686 TGAGTAGAGCAAGAGAGA-ATCTTCTTGGTCCACA-GGCAAACCA-GACATCTTCTGGAT 742 ||||||| | | || | ||||||||||| || || |||||| | | || |||| | Sbjct 895 GGAGTAGAACTTGGGACCCA-CTTCTTGGTCCGCAAGG-AAACCAAG-CGCCTGCTGGCT 951 Query 743 CAAGCAATATTGACAATTGGAGGTCCCGAATCAGAGAGAAGTACGGATTGA 793 ||||||| ||||| || ||||| |||||||||||||| ||||| || |||| Sbjct 952 CAAGCAAGATTGAAAACTGGAGCTCCCGAATCAGAGAAAAGTATGGTTTGA 1002 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40187317600 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5