BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg328832
Length=3048
Score E
Sequences producing significant alignments: (Bits) Value
AT4G28650.1 | Symbols: | Leucine-rich repeat transmembrane pro... 4686 0.0
AT4G28652.1 | Symbols: | Potential natural antisense gene, loc... 2555 0.0
> AT4G28650.1 | Symbols: | Leucine-rich repeat transmembrane protein
kinase family protein | chr4:14143984-14147537 REVERSE
LENGTH=3474
Length=3474
Score = 4686 bits (2537), Expect = 0.0
Identities = 2883/3053 (94%), Gaps = 12/3053 (0%)
Strand=Plus/Plus
Query 2 TGAAGTTGAAGATGAAGATTATGGTTCTCTTCCTCTACTACTGTTACATTGGTTCTACTT 61
||||| ||||||||||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct 257 TGAAGATGAAGATGAAGATAATAGTTCTCTTCCTTTACTACTGTTACATTGGTTCTACTT 316
Query 62 CCTCTGTTTTAGCTTCCATCGACAATGTCAACGAGCTCTCTATTTTGCTCTCGGTAAAAT 121
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||
Sbjct 317 CCTCTGTTTTAGCTTCCATCGACAATGTCAACGAGCTCTCTGTTTTGCTGTCGGTGAAAT 376
Query 122 CAACTCTTGTGGATCCTCTCAACTTTCTCAAAGACTGGAAGCTTTCAGAAACTGGCGATC 181
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 377 CAACTCTTGTGGATCCTCTCAACTTTCTCAAAGACTGGAAGCTTTCAGACACCAGCGATC 436
Query 182 ACTGTAACTGGACCGGTGTTCGGTGCAACTCCCATGGCTTTGTTGAGAAGCTCGACCTGT 241
||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 437 ACTGTAATTGGACCGGTGTTCGGTGCAACTCAAATGGCAATGTTGAGAAGCTCGACCTGG 496
Query 242 CGGGGATGAATCTCACGGGTAAAATCTCAGATTCGATCAGGCAGCTGACAAGCCTTGTTT 301
|||||||||||||||| || |||||||||||||||||||| ||||||| |||||||| |
Sbjct 497 CGGGGATGAATCTCACAGGCAAAATCTCAGATTCGATCAGCCAGCTGAGTAGCCTTGTCT 556
Query 302 CATTTAACATCTCATGCAACGGATTCGAGTCGCTGCTACCGAAATCGATCCCTCCGTTGA 361
| |||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 557 CGTTTAACATATCATGCAACGGATTCGAGTCGCTGCTCCCGAAATCAATCCCTCCGTTGA 616
Query 362 ACTCTATAGACATCAGCCAGAATTCATTCTCAGGGAGTCTTTTTCTATTTGGTAACGAAT 421
| ||||| |||||||||||||||||||||||||||||||||||||||||| | || ||||
Sbjct 617 AATCTATTGACATCAGCCAGAATTCATTCTCAGGGAGTCTTTTTCTATTTAGCAATGAAT 676
Query 422 CACTTGGACTCGTTCACCTCAATGCTTCAGGGAACAATCTCAT-TGGAAATCTCACCGAG 480
||||||| || |||||||||||||||||||||||||||||| | ||||||||||| |||
Sbjct 677 CACTTGGGCTTGTTCACCTCAATGCTTCAGGGAACAATCTC-TCCGGAAATCTCACGGAG 735
Query 481 GATCTCGGGAACTTAGTCTCTTTAGAAGTTCTTGATCTCCGAGGGAATTTCTTTCAAGGG 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 736 GATCTCGGGAACTTAGTCTCTTTAGAAGTTCTTGATCTCCGAGGGAATTTCTTTCAAGGG 795
Query 541 TCACTTCCAAGTTCATTCAAGAATCTACAGAAGCTGAGATTTCTCGGATTATCCGGAAAC 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 796 TCACTTCCAAGTTCATTCAAGAATCTACAGAAGCTGAGATTTCTCGGATTATCCGGAAAC 855
Query 601 AATCTCACTGGTGAGTTACCAAGCCTTCTCGGCGAGCTCCTTTCACTTGAAACCGCCATT 660
|||||||| || |||||||||||| |||||||| |||||| |||||||||||||||||||
Sbjct 856 AATCTCACCGGCGAGTTACCAAGCGTTCTCGGCCAGCTCCCTTCACTTGAAACCGCCATT 915
Query 661 CTTGGTTACAACGAATTCAAAGGTCCGATTCCACCGGAATTTGGAAACATAATCAGCCTC 720
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 916 CTTGGTTACAACGAATTCAAAGGTCCGATTCCACCGGAATTTGGAAACATAAACAGCCTC 975
Query 721 AAGTACCTCGATTTGGCCATCGGAAAGCTCAGTGGTGAGATTCCGTCGGAGCTCGGGAAG 780
|||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 976 AAGTACCTTGATTTGGCCATCGGAAAGCTCAGTGGTGAGATTCCGTCAGAGCTTGGGAAG 1035
Query 781 CTCAAGTCACTCGAGACGCTTCTTCTGTACGAGAATAACTTCACCGGAAAAATCCCAAGA 840
||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||
Sbjct 1036 CTCAAGTCACTCGAGACGCTTCTCCTGTACGAGAATAACTTCACCGGAACAATTCCAAGA 1095
Query 841 GAGATCGGAAACATTACCACGCTAAAGGTTCTTGATTTCTCCGATAATGCCTTAACCGGC 900
||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1096 GAGATAGGAAGCATTACCACGCTAAAGGTTCTTGATTTCTCCGATAATGCGTTAACCGGC 1155
Query 901 GAGATTCCAGTGGAGATAACCAAGCTGAAGAATCTGCAGCTACTGAACCTGATGCGCAAC 960
||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||
Sbjct 1156 GAGATTCCAATGGAGATAACAAAGCTCAAGAACCTCCAGCTACTGAACCTGATGCGCAAC 1215
Query 961 AAACTCTCCGGCTCTATTCCTCCCGGGATCAGCAATCTAG-AGCAGTTACAAGTCCTCGA 1019
|||||||| ||||| |||||||||| ||||||| ||||| | |||||||||||||||||
Sbjct 1216 AAACTCTCAGGCTCCATTCCTCCCGCCATCAGCAGTCTAGCA-CAGTTACAAGTCCTCGA 1274
Query 1020 GCTCTGGAACAACACACTCTCCGGCGAGTTGCCAAGCGATCTTGGGAAGAATTCTCCACT 1079
||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| |
Sbjct 1275 GCTCTGGAACAACACGCTCTCCGGCGAGTTACCAAGCGATCTCGGGAAGAATTCTCCATT 1334
Query 1080 ACAATGGCTTGACGTTTCTTCAAACTCCTTCTCAGGCAAGATTCCTTCGACCCTATGCAA 1139
||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||
Sbjct 1335 ACAATGGCTTGACGTTTCTTCAAACTCCTTCTCAGGCGAGATTCCTTCAACTCTATGCAA 1394
Query 1140 CAAGGGAAATCTAACCAAGCTCATTCTGTTCAACAACACCTTCACCGGTCAGATTCCAGC 1199
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1395 CAAGGGAAATCTAACCAAGCTCATTCTCTTCAACAACACCTTCACCGGTCAGATTCCAGC 1454
Query 1200 GACTCTATCCACTTGCCAGTCACTAGTTCGTGTCAGGATGCAAAACAATCTACTAAACGG 1259
|||||| ||||||||||| |||||||||||||| || ||||| |||||||||||||||||
Sbjct 1455 GACTCTTTCCACTTGCCAATCACTAGTTCGTGTTAGAATGCAGAACAATCTACTAAACGG 1514
Query 1260 TTCAATTCCCATCGGCTTTGGCAAGCTTGAGAAGCTACAAAGACTCGAATTAGCCGGAAA 1319
|||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct 1515 ATCAATTCCTATCGGCTTTGGCAAGCTTGAGAAGCTACAGAGACTCGAACTAGCCGGAAA 1574
Query 1320 TCGTCTCACCGGAGGGATCCCCAGAGACATCTCGGATTCAGTTTCGCTTTCTTTCATTGA 1379
|||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct 1575 TCGTCTCAGCGGAGGGATCCCTGGAGACATCTCCGATTCAGTTTCACTTTCTTTCATTGA 1634
Query 1380 TTTCTCAAGAAACCAGATCCGATCATCCCTCCCTTCCACAATCCTCTCAATTCACAATCT 1439
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1635 TTTCTCAAGAAACCAGATCCGATCATCTCTCCCTTCCACAATCCTCTCAATTCACAACCT 1694
Query 1440 CCAGGCGTTTTTAGTCGCCGAGAACTTTATCTCCGGCGAAGTTCCAGACCAATTCCAGGA 1499
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1695 ACAGGCGTTTTTAGTCGCCGATAACTTTATCTCCGGCGAAGTTCCAGACCAATTCCAGGA 1754
Query 1500 TTGTCCTTCACTCTCGAATCTCGATCTCTCATCAAATACTCTCACAGGAACTATCCCTTC 1559
||||||||||||||| |||||||||||||||||||| |||||||| || |||||||||||
Sbjct 1755 TTGTCCTTCACTCTCTAATCTCGATCTCTCATCAAACACTCTCACTGGCACTATCCCTTC 1814
Query 1560 CAGCATTGCTTCATGCGAGAAGCTTGTAAGCCTCAACCTAAGAAACAATAACCTCACCGG 1619
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1815 AAGCATTGCTTCATGCGAGAAGCTCGTAAGCCTCAACCTAAGAAATAATAACCTCACCGG 1874
Query 1620 AGAGATCCCTAGACAGATCACGACAATGTCTGCATTAGCTGTGCTCGATCTCTCCAACAA 1679
|| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1875 CGAAATCCCTAGACAGATCACGACAATGTCTGCATTAGCAGTGCTAGATCTCTCCAACAA 1934
Query 1680 TTCCTTAACCGGAGTACTCCCAGAGAGCATCGGAACATCTCCAGCTCTGGAACTCCTAAA 1739
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1935 TTCCTTAACCGGAGTACTACCAGAGAGCATCGGAACATCTCCAGCTCTGGAACTCCTAAA 1994
Query 1740 TGTCTCCTACAACAAGCTCACAGGTCCAGTCCCTATCAACGGCTTTCTCAAAACCATAAA 1799
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1995 CGTCTCATACAACAAGCTCACAGGTCCAGTCCCTATCAACGGCTTTCTCAAAACCATAAA 2054
Query 1800 TCCAGATGATCTGAA-AGGAAACTCCGGACTCTGCGGCGGCGTTCTTCCACCGTGTAGCA 1858
|||||||||||| || |||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct 2055 TCCAGATGATCT-AAGAGGAAACTCCGGTCTCTGCGGCGGCGTTCTACCACCGTGTAGTA 2113
Query 1859 AATTCCAAGGAGCAACATC-AGGTCACAAG-AGCTTCCACGGGAAACGGATTGTCGCCGG 1916
|||||||| |||||||||| || ||||| | ||| ||||||||||||| |||||||||||
Sbjct 2114 AATTCCAAAGAGCAACATCGAG-TCACA-GTAGCCTCCACGGGAAACGAATTGTCGCCGG 2171
Query 1917 ATGGTTAATTGGGATAGCATCGGTTCTAGCTCTAGGGATTCTCACCATCGTTGCCAGAAC 1976
|||||| ||||||||||||||||||||||||||||||||||||||||| ||| | |||||
Sbjct 2172 ATGGTTGATTGGGATAGCATCGGTTCTAGCTCTAGGGATTCTCACCATTGTTACGAGAAC 2231
Query 1977 TCTATACAA-AAGATGGTATTCCAACGGATTCTGCGGCGACGAGACGGCGAGCAAAGGTG 2035
||| ||||| || ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2232 TCTGTACAAGAA-ATGGTATTCTAACGGATTCTGCGGCGACGAGACGGCGAGCAAAGGTG 2290
Query 2036 AATGGCCTTGGAGACTAATGGCGTTTCATAGATTAGGGTTCACAGCTTCCGATATCTTGG 2095
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2291 AATGGCCTTGGAGATTAATGGCGTTTCATAGATTAGGGTTTACAGCTTCCGATATCTTGG 2350
Query 2096 CATGTATCAAAGAATCGAACATGATAGGAATGGGAGCTACAGGAATCGTATACAAAGCAG 2155
|||||||||||||||| |||||||| ||||||||||| || |||||||| ||||||||||
Sbjct 2351 CATGTATCAAAGAATCAAACATGATCGGAATGGGAGCAACCGGAATCGTGTACAAAGCAG 2410
Query 2156 AAATGTCACGATCGAGCACAGTACTCGCCGTGAAGAAGCTTTGGAGATCCGCCGCCGATA 2215
||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||| ||||
Sbjct 2411 AAATGTCACGATCAAGCACAGTTCTCGCCGTGAAGAAGCTCTGGAGATCTGCCGCGGATA 2470
Query 2216 TCGAAGATGGAACCACCGGAGATTTCGTCGGCGAAGTAAACCTCCTCGGGAAATTGAGAC 2275
| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 2471 TTGAAGATGGAACCACCGGAGATTTCGTAGGCGAAGTTAACCTCCTCGGGAAATTGAGAC 2530
Query 2276 ACAGAAACATCGTGAGGCTCCTAGGGTTCTTATACAACGACAAAAACATGATGATCGTAT 2335
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2531 ACAGAAACATAGTGAGGCTCCTAGGGTTCTTATACAACGACAAAAACATGATGATCGTAT 2590
Query 2336 ACGAATTCATGCTCAACGGAAACCTCGGCGACGCGATTCACGGCAAAAACGCCGCCGGGA 2395
| ||||||||||||||||||||||| || || ||||||||||||||||||||||||||||
Sbjct 2591 ATGAATTCATGCTCAACGGAAACCTTGGTGATGCGATTCACGGCAAAAACGCCGCCGGGA 2650
Query 2396 GGCTTCTCGTTGATTGGGTTTCGCGTTACAACATCGCGTTAGGTGTAGCTCACGGCCTAG 2455
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2651 GACTTCTCGTTGATTGGGTTTCGCGTTACAACATCGCGTTAGGTGTAGCTCACGGCCTCG 2710
Query 2456 CTTACCTCCACCATGATTGTCATCCTCCAGTGATTCACAGAGACATCAAATCCAACAATA 2515
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2711 CTTACCTCCACCATGATTGTCATCCTCCGGTGATTCACAGAGACATCAAATCCAACAATA 2770
Query 2516 TCTTGCTCGACGCGAATCTCGACGCCAGAATCGCCGACTTTGGCCTCGCGAGGATGATGG 2575
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 2771 TCTTGCTCGACGCGAATCTCGACGCCAGAATCGCCGATTTTGGCCTCGCCAGGATGATGG 2830
Query 2576 CGAGGAAGAAAGAAACCGTTTCAATGGTCGCCGGTTCTTACGGTTACATTGCTCCCGAGT 2635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2831 CGAGGAAGAAAGAAACCGTTTCAATGGTCGCCGGTTCTTACGGTTACATTGCTCCCGAGT 2890
Query 2636 ACGGATACACATTGAAGGTGGATGAGAAGATAGATATATACAGTTACGGCGTCGTATTGT 2695
| |||||||| ||||||||||||||||||||||| |||||||| |||||||||||| | |
Sbjct 2891 ATGGATACACTTTGAAGGTGGATGAGAAGATAGACATATACAGCTACGGCGTCGTACTAT 2950
Query 2696 TGGAGCTGTTAACCGGAAGAAGACCATTGGAGCCGGAGTTCGGAGAATCAGTAGACATAG 2755
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
Sbjct 2951 TGGAGCTGTTAACCGGAAGAAGACCATTGGAACCGGAGTTTGGAGAATCAGTAGACATTG 3010
Query 2756 TGGAGTGGGTGAGAAGGAAGATAAGAGACAATATATCACTAGAAGAAGCATTAGATCCTG 2815
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3011 TGGAGTGGGTGAGAAGGAAGATAAGAGACAACATATCACTAGAAGAAGCATTAGATCCTA 3070
Query 2816 ATGTAGGAAACTGCAGATATGTTCAAGAAGAGATGCTTTTAGTTCTACAAATCGCTCTTC 2875
| |||||||||||||||||||| |||||||||||||||||||||||||| || |||||||
Sbjct 3071 ACGTAGGAAACTGCAGATATGTGCAAGAAGAGATGCTTTTAGTTCTACAGATTGCTCTTC 3130
Query 2876 TATGCACCACGAAGCTCCCGAAAGACAGACCTTCGATGAGAGACGTGATATCGATGCTCG 2935
| ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3131 TCTGCACTACAAAGCTCCCGAAAGACAGACCTTCGATGAGAGATGTGATATCGATGCTCG 3190
Query 2936 GAGAGGCTAAACCGAGGAGGAAAAGTAATAGTAATGAAGAGAACACTAGTCGTAGCTTGG 2995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3191 GAGAGGCTAAACCGAGGAGGAAAAGTAATAGTAATGAAGAGAACACTAGTCGTAGCTTGG 3250
Query 2996 CCGAGAAACATACATCGGTTTTTAATACTTCACCTGTAAATGGCCTTCTTTAG 3048
||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct 3251 CCGAGAAACATTCATCGGTTTTTAGTACTTCACCTGTAAATGGCCTTCTTTAG 3303
> AT4G28652.1 | Symbols: | Potential natural antisense gene, locus
overlaps with AT4G28650 | chr4:14144954-14147600 FORWARD
LENGTH=2346
Length=2346
Score = 2555 bits (1383), Expect = 0.0
Identities = 1584/1682 (94%), Gaps = 10/1682 (1%)
Strand=Plus/Minus
Query 653 CCGCCATTCTTGGTTACAACGAATTCAAAGGTCCGATTCCACCGGAATTTGGAAACATAA 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1677 CCGCCATTCTTGGTTACAACGAATTCAAAGGTCCGATTCCACCGGAATTTGGAAACATAA 1618
Query 713 TCAGCCTCAAGTACCTCGATTTGGCCATCGGAAAGCTCAGTGGTGAGATTCCGTCGGAGC 772
||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1617 ACAGCCTCAAGTACCTTGATTTGGCCATCGGAAAGCTCAGTGGTGAGATTCCGTCAGAGC 1558
Query 773 TCGGGAAGCTCAAGTCACTCGAGACGCTTCTTCTGTACGAGAATAACTTCACCGGAAAAA 832
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 1557 TTGGGAAGCTCAAGTCACTCGAGACGCTTCTCCTGTACGAGAATAACTTCACCGGAACAA 1498
Query 833 TCCCAAGAGAGATCGGAAACATTACCACGCTAAAGGTTCTTGATTTCTCCGATAATGCCT 892
| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct 1497 TTCCAAGAGAGATAGGAAGCATTACCACGCTAAAGGTTCTTGATTTCTCCGATAATGCGT 1438
Query 893 TAACCGGCGAGATTCCAGTGGAGATAACCAAGCTGAAGAATCTGCAGCTACTGAACCTGA 952
||||||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||
Sbjct 1437 TAACCGGCGAGATTCCAATGGAGATAACAAAGCTCAAGAACCTCCAGCTACTGAACCTGA 1378
Query 953 TGCGCAACAAACTCTCCGGCTCTATTCCTCCCGGGATCAGCAATCTAG-AGCAGTTACAA 1011
|||||||||||||||| ||||| |||||||||| ||||||| ||||| | |||||||||
Sbjct 1377 TGCGCAACAAACTCTCAGGCTCCATTCCTCCCGCCATCAGCAGTCTAGCA-CAGTTACAA 1319
Query 1012 GTCCTCGAGCTCTGGAACAACACACTCTCCGGCGAGTTGCCAAGCGATCTTGGGAAGAAT 1071
||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct 1318 GTCCTCGAGCTCTGGAACAACACGCTCTCCGGCGAGTTACCAAGCGATCTCGGGAAGAAT 1259
Query 1072 TCTCCACTACAATGGCTTGACGTTTCTTCAAACTCCTTCTCAGGCAAGATTCCTTCGACC 1131
|||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 1258 TCTCCATTACAATGGCTTGACGTTTCTTCAAACTCCTTCTCAGGCGAGATTCCTTCAACT 1199
Query 1132 CTATGCAACAAGGGAAATCTAACCAAGCTCATTCTGTTCAACAACACCTTCACCGGTCAG 1191
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1198 CTATGCAACAAGGGAAATCTAACCAAGCTCATTCTCTTCAACAACACCTTCACCGGTCAG 1139
Query 1192 ATTCCAGCGACTCTATCCACTTGCCAGTCACTAGTTCGTGTCAGGATGCAAAACAATCTA 1251
|||||||||||||| ||||||||||| |||||||||||||| || ||||| |||||||||
Sbjct 1138 ATTCCAGCGACTCTTTCCACTTGCCAATCACTAGTTCGTGTTAGAATGCAGAACAATCTA 1079
Query 1252 CTAAACGGTTCAATTCCCATCGGCTTTGGCAAGCTTGAGAAGCTACAAAGACTCGAATTA 1311
|||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 1078 CTAAACGGATCAATTCCTATCGGCTTTGGCAAGCTTGAGAAGCTACAGAGACTCGAACTA 1019
Query 1312 GCCGGAAATCGTCTCACCGGAGGGATCCCCAGAGACATCTCGGATTCAGTTTCGCTTTCT 1371
|||||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||
Sbjct 1018 GCCGGAAATCGTCTCAGCGGAGGGATCCCTGGAGACATCTCCGATTCAGTTTCACTTTCT 959
Query 1372 TTCATTGATTTCTCAAGAAACCAGATCCGATCATCCCTCCCTTCCACAATCCTCTCAATT 1431
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 958 TTCATTGATTTCTCAAGAAACCAGATCCGATCATCTCTCCCTTCCACAATCCTCTCAATT 899
Query 1432 CACAATCTCCAGGCGTTTTTAGTCGCCGAGAACTTTATCTCCGGCGAAGTTCCAGACCAA 1491
||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 898 CACAACCTACAGGCGTTTTTAGTCGCCGATAACTTTATCTCCGGCGAAGTTCCAGACCAA 839
Query 1492 TTCCAGGATTGTCCTTCACTCTCGAATCTCGATCTCTCATCAAATACTCTCACAGGAACT 1551
||||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||
Sbjct 838 TTCCAGGATTGTCCTTCACTCTCTAATCTCGATCTCTCATCAAACACTCTCACTGGCACT 779
Query 1552 ATCCCTTCCAGCATTGCTTCATGCGAGAAGCTTGTAAGCCTCAACCTAAGAAACAATAAC 1611
|||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 778 ATCCCTTCAAGCATTGCTTCATGCGAGAAGCTCGTAAGCCTCAACCTAAGAAATAATAAC 719
Query 1612 CTCACCGGAGAGATCCCTAGACAGATCACGACAATGTCTGCATTAGCTGTGCTCGATCTC 1671
|||||||| || ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 718 CTCACCGGCGAAATCCCTAGACAGATCACGACAATGTCTGCATTAGCAGTGCTAGATCTC 659
Query 1672 TCCAACAATTCCTTAACCGGAGTACTCCCAGAGAGCATCGGAACATCTCCAGCTCTGGAA 1731
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 658 TCCAACAATTCCTTAACCGGAGTACTACCAGAGAGCATCGGAACATCTCCAGCTCTGGAA 599
Query 1732 CTCCTAAATGTCTCCTACAACAAGCTCACAGGTCCAGTCCCTATCAACGGCTTTCTCAAA 1791
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 CTCCTAAACGTCTCATACAACAAGCTCACAGGTCCAGTCCCTATCAACGGCTTTCTCAAA 539
Query 1792 ACCATAAATCCAGATGATCTGAA-AGGAAACTCCGGACTCTGCGGCGGCGTTCTTCCACC 1850
|||||||||||||||||||| || |||||||||||| ||||||||||||||||| |||||
Sbjct 538 ACCATAAATCCAGATGATCT-AAGAGGAAACTCCGGTCTCTGCGGCGGCGTTCTACCACC 480
Query 1851 GTGTAGCAAATTCCAAGGAGCAACATC-AGGTCACAAG-AGCTTCCACGGGAAACGGATT 1908
|||||| ||||||||| |||||||||| || ||||| | ||| ||||||||||||| |||
Sbjct 479 GTGTAGTAAATTCCAAAGAGCAACATCGAG-TCACA-GTAGCCTCCACGGGAAACGAATT 422
Query 1909 GTCGCCGGATGGTTAATTGGGATAGCATCGGTTCTAGCTCTAGGGATTCTCACCATCGTT 1968
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 421 GTCGCCGGATGGTTGATTGGGATAGCATCGGTTCTAGCTCTAGGGATTCTCACCATTGTT 362
Query 1969 GCCAGAACTCTATACAA-AAGATGGTATTCCAACGGATTCTGCGGCGACGAGACGGCGAG 2027
| |||||||| ||||| || ||||||||| |||||||||||||||||||||||||||||
Sbjct 361 ACGAGAACTCTGTACAAGAA-ATGGTATTCTAACGGATTCTGCGGCGACGAGACGGCGAG 303
Query 2028 CAAAGGTGAATGGCCTTGGAGACTAATGGCGTTTCATAGATTAGGGTTCACAGCTTCCGA 2087
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct 302 CAAAGGTGAATGGCCTTGGAGATTAATGGCGTTTCATAGATTAGGGTTTACAGCTTCCGA 243
Query 2088 TATCTTGGCATGTATCAAAGAATCGAACATGATAGGAATGGGAGCTACAGGAATCGTATA 2147
|||||||||||||||||||||||| |||||||| ||||||||||| || |||||||| ||
Sbjct 242 TATCTTGGCATGTATCAAAGAATCAAACATGATCGGAATGGGAGCAACCGGAATCGTGTA 183
Query 2148 CAAAGCAGAAATGTCACGATCGAGCACAGTACTCGCCGTGAAGAAGCTTTGGAGATCCGC 2207
||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||
Sbjct 182 CAAAGCAGAAATGTCACGATCAAGCACAGTTCTCGCCGTGAAGAAGCTCTGGAGATCTGC 123
Query 2208 CGCCGATATCGAAGATGGAACCACCGGAGATTTCGTCGGCGAAGTAAACCTCCTCGGGAA 2267
||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 122 CGCGGATATTGAAGATGGAACCACCGGAGATTTCGTAGGCGAAGTTAACCTCCTCGGGAA 63
Query 2268 ATTGAGACACAGAAACATCGTGAGGCTCCTAGGGTTCTTATACAACGACAAAAACATGAT 2327
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 62 ATTGAGACACAGAAACATAGTGAGGCTCCTAGGGTTCTTATACAACGACAAAAACATGAT 3
Query 2328 GA 2329
||
Sbjct 2 GA 1
Score = 507 bits (274), Expect = 3e-142
Identities = 326/352 (93%), Gaps = 0/352 (0%)
Strand=Plus/Minus
Query 2 TGAAGTTGAAGATGAAGATTATGGTTCTCTTCCTCTACTACTGTTACATTGGTTCTACTT 61
||||| ||||||||||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct 2027 TGAAGATGAAGATGAAGATAATAGTTCTCTTCCTTTACTACTGTTACATTGGTTCTACTT 1968
Query 62 CCTCTGTTTTAGCTTCCATCGACAATGTCAACGAGCTCTCTATTTTGCTCTCGGTAAAAT 121
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||
Sbjct 1967 CCTCTGTTTTAGCTTCCATCGACAATGTCAACGAGCTCTCTGTTTTGCTGTCGGTGAAAT 1908
Query 122 CAACTCTTGTGGATCCTCTCAACTTTCTCAAAGACTGGAAGCTTTCAGAAACTGGCGATC 181
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1907 CAACTCTTGTGGATCCTCTCAACTTTCTCAAAGACTGGAAGCTTTCAGACACCAGCGATC 1848
Query 182 ACTGTAACTGGACCGGTGTTCGGTGCAACTCCCATGGCTTTGTTGAGAAGCTCGACCTGT 241
||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 1847 ACTGTAATTGGACCGGTGTTCGGTGCAACTCAAATGGCAATGTTGAGAAGCTCGACCTGG 1788
Query 242 CGGGGATGAATCTCACGGGTAAAATCTCAGATTCGATCAGGCAGCTGACAAGCCTTGTTT 301
|||||||||||||||| || |||||||||||||||||||| ||||||| |||||||| |
Sbjct 1787 CGGGGATGAATCTCACAGGCAAAATCTCAGATTCGATCAGCCAGCTGAGTAGCCTTGTCT 1728
Query 302 CATTTAACATCTCATGCAACGGATTCGAGTCGCTGCTACCGAAATCGATCCC 353
| |||||||| |||||||||||||||||||||||||| |||||||| |||||
Sbjct 1727 CGTTTAACATATCATGCAACGGATTCGAGTCGCTGCTCCCGAAATCAATCCC 1676
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 151554334803
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5