BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg328856

Length=426
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G28395.1 | Symbols: ATA7, A7 | Bifunctional inhibitor/lipid-...   601    2e-171


> AT4G28395.1 | Symbols: ATA7, A7 | Bifunctional inhibitor/lipid-transfer 
protein/seed storage 2S albumin superfamily protein 
| chr4:14043940-14044902 FORWARD LENGTH=768
Length=768

 Score =  601 bits (325),  Expect = 2e-171
 Identities = 394/427 (92%), Gaps = 5/427 (1%)
 Strand=Plus/Plus

Query  1    ATGAGGATACATCGTGCTATATTGGTCGTGA-CGTTCTTTGTCATGATGAAGACCGCAGT  59
            |||| ||||||   ||| |||||||| || | ||||||| ||| ||||||||||||| ||
Sbjct  172  ATGAAGATACA---TGCCATATTGGTAGT-AGCGTTCTTGGTCCTGATGAAGACCGCCGT  227

Query  60   TTCCCAGGACAATGACCCGATGGCTCACTGCAGGGACGTGTTCGTGAGTTTCATGCCGTG  119
            ||||||||||||| | ||| |||  || ||||| ||||||||||||||||||||||| ||
Sbjct  228  TTCCCAGGACAATAATCCGCTGGAACATTGCAGAGACGTGTTCGTGAGTTTCATGCCCTG  287

Query  120  CATGGGTTTCGTCGAGGGAATATTCCAACAACCTTCGCCAGATTGCTGCAGAGGCGTGAC  179
            |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct  288  CATGGGCTTCGTCGAGGGAATATTTCAACAACCTTCTCCAGATTGCTGCAGAGGCGTGAC  347

Query  180  CCACTTGAACAACATCGTCAAGTTCACGTCTCCAGGATCGAGGAATAGGCAGGACACTGG  239
            ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | |||
Sbjct  348  CCACTTGAACAACGTCGTCAAGTTTACGTCTCCAGGATCGAGGAATAGGCAGGATAGTGG  407

Query  240  AGAAACAGAGAGAGTGTGTCTGTGCATAGAGATAATGGGAAATGCAAATCATCTTCCTTT  299
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct  408  AGAAACAGAGAGAGTGTGTCTGTGCATTGAGATAATGGGAAATGCAAATCATCTTCCTTT  467

Query  300  TCTTCCCGCTGCCATTAATAACCTTCCTCGCCGTTGTTCTCTTACTCTCAGCTTTCCCAT  359
            ||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  468  TCTTCCCGCCGCTATTAATAACCTTCCTCTCCGTTGTTCTCTTACTCTCAGCTTTCCCAT  527

Query  360  CTCCGTTGCTATGGACTGTTCTCAGCTCAGAAACACCAAGAATCCCGACGTTGAAAAATT  419
            |||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct  528  CTCCGTTGATATGGACTGTTCTCAGTTCAGAAACACCAAGAATCCCGACGTTGAGAAATT  587

Query  420  AAATTAA  426
            |||||||
Sbjct  588  AAATTAA  594



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 20207635098


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5