BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg328949 Length=1185 Score E Sequences producing significant alignments: (Bits) Value AT4G27460.1 | Symbols: | Cystathionine beta-synthase (CBS) fam... 1648 0.0 > AT4G27460.1 | Symbols: | Cystathionine beta-synthase (CBS) family protein | chr4:13732910-13734304 FORWARD LENGTH=1246 Length=1246 Score = 1648 bits (892), Expect = 0.0 Identities = 1092/1188 (92%), Gaps = 15/1188 (1%) Strand=Plus/Plus Query 1 ATGGCACTGTCTCTTCTCTCCTACGATGtctccgacctctgtctcggcaagcctccactc 60 ||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||| || Sbjct 30 ATGGCACTGTCCCTTCTCTCCTACAACGTCTCCGACCTCTGTCTCGGCAAACCTCCTCTT 89 Query 61 cgttctctctccgcctcttcctcctccgTATCAGACGCCATCACTGCCCTGAAATCCTCT 120 |||| ||| ||| ||||||||||||||||||| ||||||||| ||||||| ||||||||| Sbjct 90 CGTTGTCTTTCCTCCTCTTCCTCCTCCGTATCCGACGCCATCGCTGCCCTCAAATCCTCT 149 Query 121 GAAGACACTTTCCTCTCTGTCTGGAACTGCAATCACAACGATGACGTTATCACAGAATGC 180 ||||||||||||||||| |||||||| ||||||||| |||||||| || |||||| ||| Sbjct 150 GAAGACACTTTCCTCTCCGTCTGGAATTGCAATCACGACGATGACAATAACACAGAGTGC 209 Query 181 GAGTGCTTGGGGAAAATATCAATGGCTGACATCATCTGCCACTTGTCCAAAGACCACGAC 240 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct 210 GAGTGCTTGGGGAAAATATCAATGGCTGACGTCATCTGCCACTTGTCCAAAGACCATGAC 269 Query 241 CACACTCTCTCTGCCTTAAACGCATCCGTCTCTGTTCTTCTCCCCAAAACTCGTTCCATT 300 |||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 270 CACAGTCTCTGTGCCTTAAACTCATCCGTCTCTGTTCTTCTCCCCAAAACTCGTTCCATT 329 Query 301 GTCCTCCATGTTCAACCCTCGTGCAGCTTAATCGAAGCCATTGATCTGATAATCCAAGGA 360 ||||||||||||||||| || ||||||||||| ||||||||||||||||||||| ||||| Sbjct 330 GTCCTCCATGTTCAACCATCCTGCAGCTTAATAGAAGCCATTGATCTGATAATCAAAGGA 389 Query 361 GCACAGAATTTGATTGTCCCAATACAGACAAAGCCCTTCACTAAGAAAAGGCAGCATAAG 420 ||||||||| |||||||||| ||||| |||||||||| ||||||||||| |||||| || Sbjct 390 GCACAGAATCTGATTGTCCCGATACATACAAAGCCCTACACTAAGAAAAAGCAGCACAAC 449 Query 421 GACAACGTGTCGGTCACCACCACCACCCACTCGAACGGACGACGATTCTGCTGGATCACA 480 |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 450 GACAACGTTTCGGTCACCACCACCACCCACTCGAACGGACAACGATTCTGCTGGATCACA 509 Query 481 CAAGAAGACATCATTCAGTTTCTCCTCGGATCCATCGCCGCATTCTCTCCTTTGCCGGCC 540 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct 510 CAAGAAGACATCATTCAGTTTCTCCTCGGATTCATCGCCGCATTCTCTCCTTTGCCAGCG 569 Query 541 ATGTCACTCTCTGACCTCGGTATCATCAACAGCACACACAC-GATCCTTGCGGTCGATTA 599 ||||| |||||||| |||||| ||||||||||||||||||| | | ||||||||||||| Sbjct 570 ATGTCCCTCTCTGATCTCGGTGTCATCAACAGCACACACACAGTTG-TTGCGGTCGATTA 628 Query 600 CCACTCCTCCGCCTCCGCAGTTGTCTCCGCCATATCCAACGCTCTCGCCGTCCAAACTTC 659 ||||||||| || |||||||||||||| ||| ||||||||||||| ||||||||||| || Sbjct 629 CCACTCCTCAGCGTCCGCAGTTGTCTCTGCCGTATCCAACGCTCTTGCCGTCCAAACCTC 688 Query 660 TGTCGCAGTGGTCGACGGTGAGGGAGATGATGACCCTTTTACGTATTTGATCGGTGAAAT 719 |||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| Sbjct 689 TGTCGCAGTGGTCGACGGTGAGGGAGATGA---CCCTTTTACGTCTTTGATCGGCGAAAT 745 Query 720 ATCCCCAATGACACTAACTTGCTGCGACGAGACAGCAGCTGCGGCGGTGGCGATGCTCTC 779 |||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 746 ATCCCCGATGACATTAACTTGCTGCGACGAGACAGCAGCTGCGGCGGTGGCGACGCTCTC 805 Query 780 TGCAGGAGAACTGGTGGCGTACATAGACGGAGCAAATCCGCCGGAGAGTTTTGTTCAGAA 839 || ||||| ||| ||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 806 CGCTGGAGATCTGATGGCGTACATAGACGGAGCAAATCCTCCGGAGAGTCTTGTTCAGAT 865 Query 840 CGTCAGGAACCGTTTGGAGGACAAAGGATTGATGGGTTTGCTCTCGCTTTTCGATTCTCT 899 ||| ||||||||||||||||| ||||||||||| |||||| | ||||||||||||||||| Sbjct 866 CGTTAGGAACCGTTTGGAGGATAAAGGATTGATTGGTTTGATGTCGCTTTTCGATTCTCT 925 Query 900 CTCACCTTATTCGACGTCGTCGGGTTATTCCTCGGAGGAAGAAGCTCCAGCGAGGACGAC 959 |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| Sbjct 926 CTCATCTTATTCGACGTCGTCGGGTTATTCGTCGGAGGAAGAAGCTCCAGTGAGAACGAC 985 Query 960 GTCGACGTATGGGA-GGTCGATGAGCAGCTCAGCAAGAGTGGCGAGGAAGTCGGAGGCCA 1018 |||| ||||| | |||||||||| |||||||||||| |||| |||||||||||||| | Sbjct 986 GTCG---TATGG-ACGGTCGATGAGTAGCTCAGCAAGAATGGCAAGGAAGTCGGAGGCGA 1041 Query 1019 TAGTGTGTAACCCGAAGAGCTCGTTAATGGCGGTGATGATCCAAGCGGTTGCTCATCGAG 1078 |||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1042 TAGTGTGTAATCCAAAGAGCTCGTTAATGGCAGTGATGATCCAAGCGGTTGCTCATCGAG 1101 Query 1079 TGAACTACGCGTGGGTGGTTGA-AACGGACGGTTGTTTCGTTGGCATGGTTACTTTTGTT 1137 |||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||| Sbjct 1102 TGAACTACGCGTGGGTGGTTGAGAA-GGATGGTTGTTTCGTTGGCATGGTTACTTTTGTT 1160 Query 1138 GATATCTTAAAAGTTTTTAGGAATTTTTTGGAGAATAATGACATGTGA 1185 ||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct 1161 GATATCTTAAAAGTTTTTAGGAAATTTTTGGAGAAT---GACATGTGA 1205 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 58182431655 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5