BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg329032
Length=1410
Score E
Sequences producing significant alignments: (Bits) Value
AT4G26510.1 | Symbols: UKL4 | uridine kinase-like 4 | chr4:1338... 2422 0.0
AT1G55810.1 | Symbols: UKL3 | uridine kinase-like 3 | chr1:2086... 913 0.0
> AT4G26510.1 | Symbols: UKL4 | uridine kinase-like 4 | chr4:13384062-13388290
FORWARD LENGTH=1896
Length=1896
Score = 2422 bits (1311), Expect = 0.0
Identities = 1377/1410 (98%), Gaps = 0/1410 (0%)
Strand=Plus/Plus
Query 1 ATGGGTTCTAAGTCCGTTGTTGACATGATCGAAGCTGCCTCGGGGGTACATTTTTCTGTT 60
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |
Sbjct 117 ATGGGTTCTAAGTCCGTTGTTGACATGATCGAAGCTGCCTCGCGGGCACATTTTTCTGGT 176
Query 61 TTACACGTGAATGGCCACATGAATGGGTTGGAACCTAGAGCAGTTAAGGATACCACTTCT 120
|||||||||||||| |||||||||||||||||||| || ||| ||||||| |||||||||
Sbjct 177 TTACACGTGAATGGGCACATGAATGGGTTGGAACCAAGTGCACTTAAGGAAACCACTTCT 236
Query 121 GCATCAGAAGATATCCAAAGACAGCCTTTTGTTATAGGTGTTGCTGGAGGCGCAGCATCG 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 237 GCATCAGAAGATATCCAAAGACAGCCTTTTGTAATAGGTGTTGCTGGAGGCGCAGCATCG 296
Query 181 GGAAAGACTACTGTTTGTGATATGATAATCCAGCAACTGCATGATCAGCGTGTTGTACTT 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 297 GGAAAGACTACTGTTTGTGATATGATAATCCAGCAACTGCACGATCAGCGTGTTGTACTT 356
Query 241 ATTAACCTGGACTCGTTCTATCACAATCTGACTGAAGAAGAACTTGCTAGAGTTCATGAA 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 357 ATTAACCTGGACTCGTTCTATCATAATCTGACTGAAGAAGAACTTGCTAGAGTTCATGAA 416
Query 301 TACAACTTTGACCATCCAGACGCATTTGACACAGAGCATTTATTGTCTTGTATGGAAAAA 360
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 417 TACAACTTTGATCATCCAGACGCATTTGACACAGAGCATTTATTGTCTTGTATGGAGAAA 476
Query 361 TTGAGGCAAGGGCAAGCTGTAGATATACCAAAATACGATTTCAAAACTTACAGGAGCAGT 420
|||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct 477 TTGAGGCAAGGGCAAGCTGTAGATATTCCAAAATATGATTTTAAAACTTACAGGAGCAGT 536
Query 421 GTTTTCAGAAGGGTAAATCCTACGGATGTAATAATTCTTGAAGGGATACTTTTATTCCAT 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 537 GTTTTCAGAAGGGTAAATCCTACAGATGTAATAATTCTTGAAGGGATACTTTTGTTCCAT 596
Query 481 GATCCACGCGTCCGAAAATTGATGAACATGAAGATTTTTGTTTGCACAGATGCTGACGTT 540
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 GATCCACGCGTCCGAAAGTTGATGAACATGAAGATTTTTGTTTGCACAGATGCTGACGTT 656
Query 541 CGTTTGGCAAGAAGGATAAAAAGAGATACTGTCGAGAATGGTAGAGATATCGGCACAGTA 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 CGTTTGGCAAGAAGGATAAAAAGAGATACTGTCGAGAATGGTAGAGATATCGGCACAGTA 716
Query 601 CTTGACCAGTACTCAAAGTTTGTGAAGCCTGCTTTTGATGACTTCATTCTTCCGACGAAG 660
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 717 CTTGACCAGTACTCAAAGTTTGTGAAGCCTGCTTTTGATGACTTCATTCTTCCAACGAAG 776
Query 661 AAATATGCAGATATTATAATCCCTCGTGGTGGGGATAATCATGTAGCTATTGACTTAATT 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 AAATATGCAGATATTATAATCCCTCGTGGTGGGGATAATCATGTAGCTATTGACTTAATT 836
Query 721 GTGCAACATATTTGCACCAAGCTGGGTCAACATGATCTCTGTAAAATATATCCTAATCTC 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 837 GTGCAACATATTTGCACCAAGCTGGGTCAACATGATCTCTGTAAAATATATCCTAATCTC 896
Query 781 TATGTTATACACTCGACATTTCAGATTAGAGGGATGCACACCCTTATACGAGATTCTCAG 840
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 897 TACGTTATACACTCGACATTTCAGATAAGAGGGATGCACACCCTTATACGAGATTCTCAG 956
Query 841 ACAACCAAACATGATTTTGTCTTCTATTCTGATCGATTGATTAGGCTGGTTGTAGAACAT 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 957 ACAACCAAACATGATTTTGTCTTCTATTCTGATCGATTGATTAGGCTGGTTGTAGAACAT 1016
Query 901 GGTCTTGGACATCTGCCTTTCACTGAAAAGCAAGTGATTACTCCAACCGGATGTGTGTAT 960
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1017 GGTCTTGGACATCTGCCTTTTACTGAAAAGCAAGTGATTACTCCAACCGGATGTGTGTAT 1076
Query 961 TCTGGTGTGGATTTCTGTAAACGGTTATGTGGTGTCTCTGTGATTAGGAGTGGTGAGAGC 1020
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1077 TCTGGTGTGGATTTCTGTAAACGGTTATGTGGTGTCTCGGTGATTAGGAGTGGTGAGAGC 1136
Query 1021 ATGGAGAATGCGTTGCGAGCATGTTGCAAAGGTATCAAGATCGGGAAGATCCTAATTCAC 1080
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 ATGGAGAATGCGTTACGAGCATGTTGCAAAGGTATCAAGATCGGGAAGATCCTAATTCAC 1196
Query 1081 AGAGAAGGCGACAATGGTCAACAGCTTGTTTATGAGAAATTGCCAAATGATATCTCGGAG 1140
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1197 AGAGAAGGTGACAATGGTCAACAGCTTGTTTATGAGAAATTGCCAAATGATATCTCAGAG 1256
Query 1141 AGGCATGTCCTATTGTTGGATCCTATTCTCGGCACAGGAAACTCAGCGGTTGAAGCTATC 1200
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1257 AGGCATGTCCTATTGTTGGATCCTATTCTCGGGACAGGAAACTCAGCGGTTGAAGCTATC 1316
Query 1201 AACCTCCTTATAAGCAAGGGCGTACCTGAGGGAAACATCATATTTCTAAACCTTATCTCA 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317 AACCTCCTTATAAGCAAGGGCGTACCTGAGGGAAACATCATATTTCTAAACCTTATCTCA 1376
Query 1261 GCACCTCAAGGTGTTCATGTTGTCTGCAAAAAATTCCCAAGAATAAAGATAGTGACATCT 1320
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1377 GCACCTCAAGGTGTTCATGTGGTCTGCAAAAAATTCCCAAGAATAAAGATAGTGACATCT 1436
Query 1321 GAAATCGATAATGGGTTAAACGACGAGTTTCGTGTTATTCCTGGTATGGGCGAGTTTGGG 1380
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1437 GAAATCGATAATGGGTTAAACGAAGAGTTTCGTGTTATTCCTGGTATGGGGGAGTTTGGG 1496
Query 1381 GACCGATATTTTGGAACAGACGATGACTAG 1410
||| |||||||||| |||||||||||||||
Sbjct 1497 GACAGATATTTTGGCACAGACGATGACTAG 1526
> AT1G55810.1 | Symbols: UKL3 | uridine kinase-like 3 | chr1:20860609-20864266
FORWARD LENGTH=1768
Length=1768
Score = 913 bits (494), Expect = 0.0
Identities = 1028/1285 (80%), Gaps = 40/1285 (3%)
Strand=Plus/Plus
Query 145 CCTTTTGTTATAGGTGTTGCTGGAGGCGCAGCAT-CGGGAAAGACTACTGTTTGTGATAT 203
|||||||| || || ||||||||||| ||||||| ||||||| || ||||| ||||||||
Sbjct 234 CCTTTTGTGATCGGAGTTGCTGGAGGTGCAGCATCCGGGAAA-ACAACTGTCTGTGATAT 292
Query 204 GATAATCCAGCAACTGCATGATCAGCGTGTTGTACTTATTAACCTGGACTCGTTCTATCA 263
||| || |||||||||||||||||| | | ||| || | || | ||| || ||||| ||
Sbjct 293 GATTATGCAGCAACTGCATGATCAGAGAGCTGTTGTTGTAAATCAGGATTCTTTCTACCA 352
Query 264 CAATCTGACTGAAGAAGAACTTGCT-AGAGTTCATGAATACAACTTTGACCATCCAGACG 322
||| | | ||||| || |||| | ||||||||||| ||||| ||||||||||| ||||
Sbjct 353 TAATGTAAATGAAGTGGAGCTTG-TAAGAGTTCATGATTACAATTTTGACCATCCTGACG 411
Query 323 CATTT-GACACAGAGCATTTATTGTCTTGTATGGAAAAATTGAGGCAAGGGCAAGCTGTA 381
| ||| || || ||||| |||||||||| ||||| || || || |||| ||||| |||
Sbjct 412 C-TTTCGATACTGAGCAATTATTGTCTTCCATGGAGAAGTTAAGAAAAGGACAAGCAGTA 470
Query 382 GATATACCAAAATACGATTTCAAAACTTACAGGAGCAGTG-TTTT----C-AGAAGGGTA 435
||||| || || || || ||||||| ||||| || || || |||| | ||||||||
Sbjct 471 GATATTCCTAATTATGACTTCAAAAGTTACAAGAACAATGTTTTTCCACCTAGAAGGGTG 530
Query 436 AATCCTACGGATGTAATAATTCTTGAAGGGATACT-TTTATTCCATGATCCACGCGTCCG 494
|||||| | || || |||||||| ||||| ||||| || |||||||| || || || ||
Sbjct 531 AATCCTTCTGACGTTATAATTCTGGAAGGTATACTCATT-TTCCATGACCCTCGGGTGCG 589
Query 495 AAAATTGATGAACATGAAGATTTTTGTTTG-CACAGATGCTGACGTTCGTTTGGCAAGAA 553
| | ||||||||||||||||| |||| | | | ||||||| || || ||| | || ||||
Sbjct 590 AGATTTGATGAACATGAAGATATTTG-TAGACGCAGATGCCGATGTGCGTCTAGCGAGAA 648
Query 554 GGATAAAAAGAGATACTGTCGAGAATGGTAGAGATATCGGCACAGTACTTGACCAGTACT 613
|||||||| | |||||||| ||||| || |||||||| | ||| || |||||||||||||
Sbjct 649 GGATAAAACGCGATACTGTTGAGAAGGGCAGAGATATTGCCACTGTTCTTGACCAGTACT 708
Query 614 CAAAGTTTGTGAAGCCTGCTTTTGATGACTTCATTCTTCCGACGAAGAAATATGCAGATA 673
|||||||||||||||| || ||||| || ||||| || || || |||||||| |||||||
Sbjct 709 CAAAGTTTGTGAAGCCAGCATTTGAGGATTTCATACTCCCAACAAAGAAATACGCAGATA 768
Query 674 TTATAAT-CCCTCGTGGTGGGGATAATCATGTAGCTATTGACTTAATTGTGCAACATATT 732
| ||||| ||| || ||||| ||||| ||||| |||||||| || ||||||||||| ||
Sbjct 769 TAATAATTCCC-CGAGGTGGTGATAACCATGTTGCTATTGATTTGATTGTGCAACACATC 827
Query 733 TGCACCAAGCTGGGTCAACATGATCTCTGTAAAATATATCCTAATCTCTATGTTATACAC 792
|| ||||| ||||||||||||||||||||||| ||||| ||||| |||||||| ||
Sbjct 828 CATACGAAGCTCGGTCAACATGATCTCTGTAAAATTTATCCAAATCTTTATGTTATTCAA 887
Query 793 TCGACATTTCAGATTA-GAGGGATGCACACCCTTATACGAGATTCTCAGACAACCAAA-C 850
|| || |||||||| | | || |||||||| || || || || ||| | ||||| ||| |
Sbjct 888 TCAACTTTTCAGAT-ACGTGGTATGCACACTCTAATCCGCGACTCTAAAACAAC-AAAGC 945
Query 851 ATGATTTTGTCTTCTATTCTGATCGATTGATTAGGCT-GGTTGTAGAACATGGTCTTGGA 909
|||| ||| ||||||| || ||||||||||| | | | ||| || |||||||| || |||
Sbjct 946 ATGACTTTATCTTCTACTCCGATCGATTGAT-ACGTTTGGTCGTTGAACATGGCCTCGGA 1004
Query 910 CATCTGCC-TTTCACTGAAAAGCAAGTGATTACTCCAACCGGATGTGTGTATTCTGGTGT 968
|| || || ||| || |||||||||||| |||||||||| |||| ||||||||| |||||
Sbjct 1005 CACCTTCCCTTT-ACAGAAAAGCAAGTGGTTACTCCAACAGGATCTGTGTATTCGGGTGT 1063
Query 969 GGATTTCTGTAA-ACGGTTATGTGGTGTCTCTGTGATTAGGAGTGGTGAGAGCATGGAGA 1027
||| |||||||| | | ||||||||||| || || || || |||||||| |||||||
Sbjct 1064 GGACTTCTGTAAGAAACTG-TGTGGTGTCTCAGTTATCAGAAGCGGTGAGAGTATGGAGA 1122
Query 1028 ATGCG-TTGCGAGCATGTTGCAAAGGTATCAAGATCGGGAAGATCCTAATTCACAGAGAA 1086
| || || ||||||| |||||||| ||||| || |||||||| || ||||| ||||||
Sbjct 1123 ACGCTCTTA-GAGCATGCTGCAAAGGCATCAAAATTGGGAAGATTCTGATTCATAGAGAA 1181
Query 1087 GGCGACAATGGTCAACAGCTTGTTTATGAGAAATTGCCAA-ATGATATCTCGGAGAGGCA 1145
||||||||||||||||||||| | || ||||| | || | || || || || |||||
Sbjct 1182 GGCGACAATGGTCAACAGCTTATCTACGAGAAGCTACCCTCA-GACATTTCAGAAAGGCA 1240
Query 1146 TGTCCTATTGTTGGATCCTATTCTCGGCACAGGAAACTCAGCGGTTG-AAGCTATCA-AC 1203
||| || || ||||||| || ||||| ||||||||||| ||||| | |||| || | ||
Sbjct 1241 TGTGCTTTTACTGGATCCAATCCTCGGGACAGGAAACTCGGCGGT-GCAAGCGATAAGAC 1299
Query 1204 CTCCTTATAAGCAAGGGCGTACCTGAGGGAAACATCATATTTCTAAACCTT-ATCTCAGC 1262
| || ||||| || ||||| ||||| |||||||||||||| || || || || ||
Sbjct 1300 -TGCTCATAAGTAAAGGCGTGCCTGAATCCAACATCATATTTCTCAAT-TTGATATCTGC 1357
Query 1263 ACCTCAAGGTGTTCATGTTGTCTGCAAAAAATTCCCAAGAATAAAGATAGTGACATCTGA 1322
|||| |||| || |||| || |||||||| |||||||| |||||||| ||||| || ||
Sbjct 1358 ACCTGAAGGAGTAAATGTGGTGTGCAAAAAGTTCCCAAGGATAAAGATTGTGACTTCAGA 1417
Query 1323 AATCGATAATGGGTT-AAACGACGAGTTTCGTGTTATTCCTGGTATGGGCGAGTTTGGGG 1381
|| || | | |||| |||||||||||| || ||| |||||||||||||||||||||| |
Sbjct 1418 GATAGA-ACTCGGTTTAAACGACGAGTTCCGAGTTGTTCCTGGTATGGGCGAGTTTGGAG 1476
Query 1382 ACCGATATTTTGGAACAGACGATGA 1406
|||| ||||||||||| || |||||
Sbjct 1477 ACCGCTATTTTGGAACCGATGATGA 1501
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69477554280
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5