BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg329043
Length=1494
Score E
Sequences producing significant alignments: (Bits) Value
AT4G26390.1 | Symbols: | Pyruvate kinase family protein | chr4... 2272 0.0
AT5G56350.1 | Symbols: | Pyruvate kinase family protein | chr5... 1391 0.0
> AT4G26390.1 | Symbols: | Pyruvate kinase family protein | chr4:13342207-13344418
FORWARD LENGTH=1494
Length=1494
Score = 2272 bits (1230), Expect = 0.0
Identities = 1407/1495 (94%), Gaps = 2/1495 (0%)
Strand=Plus/Plus
Query 1 ATGGCTATGGAACAGAGGCCAAAGACGAAGATCGTGTGCACACTCGGGCCAGCTTCCAGA 60
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct 1 ATGGCTATGGAACAGAGGCCTAAGACGAAGATCGTGTGCACACTCGGGCCGGCGTCCAGA 60
Query 61 TCTGTCTCAATGGTCGAGAAGCTTCTTATGGCGGGGATGAGCGTGGCTCGCTTCAACTTT 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TCTGTCCCAATGGTCGAGAAGCTTCTTATGGCGGGGATGAGCGTGGCTCGCTTCAACTTT 120
Query 121 TCTCATGGATCTTACGAATATCATCAGGAGACTCTCGACAATCTTCGTCAAGCCATGCTT 180
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 121 TCTCATGGATCTTACGAATATCACCAGGAGACTCTCGACAATCTTCGTCAGGCCATGCTT 180
Query 181 AATACTGGGATTCTCTGTGCTGTCATGCTCGATACCAAGGGACCAGAGATTCGAACTGGG 240
|| ||||| || || ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 181 AACACTGGCATGCTATGTGCTGTCATGCTCGACACCAAGGGACCAGAGATTCGAACCGGG 240
Query 241 TTCTTGAAGGATGGGAAACCTATCCAGCTCAAACAAGGCCAAGAAATCACCATTTCAACT 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TTCTTAAAGGATGGGAAACCTATCCAGCTCAAACAAGGCCAAGAAATCACCATTTCAACT 300
Query 301 GACTATGACATGAAGGGTGATGAGAAAACGATTTGCATGAGCTACAAGAAGTTAGCGCAA 360
||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 301 GACTATGACTTGAAGGGTGATGAGAAAACTATTTGCATGAGCTACAAGAAGTTGGCGCAA 360
Query 361 GATGTGAACCCAGGAATGGTCATACTCTGTGCCGATGGTACCATCTCGTTACTGGTTCTC 420
|||||||| ||||| |||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 361 GATGTGAATCCAGGCATGGTCATACTCTGTGCCGATGGTACCATCTCGTTAAAGGTCCTT 420
Query 421 TCTTGTGACAAAGAAAAGGGTACCGTTCGTTGTCGTTGTGAAAACACTTCAATGCTCGGT 480
|||||||||||||||||||| || || |||||||||||||| |||||||||||||| |||
Sbjct 421 TCTTGTGACAAAGAAAAGGGCACTGTCCGTTGTCGTTGTGAGAACACTTCAATGCTTGGT 480
Query 481 GAGAGAAAAAACGTCAATCTCCCTGGTGTCGTTGTGGATCTCCCAACTCTAACTGAGAAA 540
|| ||||| ||||| |||||||||||||| || || |||||||||||||||||||| |||
Sbjct 481 GAAAGAAAGAACGTTAATCTCCCTGGTGTTGTGGTTGATCTCCCAACTCTAACTGAAAAA 540
Query 541 GACAAGCAAGACATTCTTGAATGGGGAGTTCCAAATCAAATCGATATGATTGCTCTGTCT 600
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 541 GACAAGCAAGACATTCTTGAATGGGGAGTTCCCAATCAAATCGACATGATTGCTCTGTCT 600
Query 601 TTTGTCAGAAAAGGTTCAGACTTGGTACAAGTTAGGCAGCTACTCGGAAAACATGCAAAA 660
||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| |||
Sbjct 601 TTTGTCAGAAAAGGTTCGGACTTGGTACAAGTTAGGAAGCTACTTGGAAAACATGCTAAA 660
Query 661 ACCATTCTTCTCATGTCAAAGGTTGAGAACCAAGAAGGTGTAGCGAATTTTGATGATATT 720
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 661 ACCATACTTCTCATGTCAAAGGTTGAAAACCAAGAAGGTGTAGCGAATTTTGATGATATC 720
Query 721 TTGATAAACTCGGATGCGTTTATGATCGCTAGAGGTGACCTTGGAATGGAGATCCCAATT 780
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 721 TTGATAAACTCGGATGCGTTTATGATCGCAAGAGGTGACCTTGGAATGGAGATTCCAATT 780
Query 781 GAGAAGATCTTCTTAGCTCAGAAGGTGATGATCTACAAATGCAATTTCATGGGGAAGCCA 840
|||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 781 GAGAAGATATTCTTAGCTCAGAAAGTGATGATCTACAAGTGCAATTTCATGGGGAAGCCA 840
Query 841 GTGGTCACAGCGACTCAGATGCTCGAGTCTATGATCAAATCCCCACGACCAACAAGAGCA 900
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 841 GTGGTTACAGCGACTCAGATGCTTGAGTCTATGATCAAATCCCCACGACCAACAAGAGCA 900
Query 901 GAAGCCACTGATGTTGCAAACGCTGTACTCGATGGCACGGACTGTGTCATGCTCAGTGGT 960
||||| |||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||
Sbjct 901 GAAGCTACTGATGTTGCAAATGCTGTCCTCGATGGCACAGACTGTGTCATGCTTAGTGGT 960
Query 961 GAAACCGCAGCAGGAGCATATCCAGAGCTTGCTGTCCGTACAATGGCCAAGATTTGTGTG 1020
||||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||
Sbjct 961 GAAACCGCAGCTGGAGCATACCCAGAGCTTGCTGTTCGTACAATGGCCAAGATATGTGTG 1020
Query 1021 GAAGCAGAGAGCACA-TTGGACTATGGAGACATCTTCAAGAGGATAATGCTTCACGCTGC 1079
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 GAAGCAGAGAGCACACTTG-ACTATGGAGACATCTTCAAGAGGATAATGCTTCACGCTGC 1079
Query 1080 GGTCCCTATGAGCCCGATCGAGTCACTTGCTTCCTCTGCGGTCAGAACCGCTACTTCCTC 1139
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1080 GGTCCCTATGAGCCCGATGGAGTCACTTGCTTCATCTGCGGTCAGAACCGCTACTTCCTC 1139
Query 1140 AAGAGCCACTCTCATGATGGTCTTGACCAGAGGAGGCAGCACGGCGAGACTGGTGGCTAA 1199
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1140 AAGAGCCACTCTTATGATGGTCTTGACCAGAGGAGGCAGCACGGCGAGGCTGGTGGCTAA 1199
Query 1200 GTATAGACCAGGGATACCCATTCTGTCGGTGGTGGTTCCTGAAATCACGTCCGACTCTTT 1259
|||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||
Sbjct 1200 GTATAGACCAGGGATACCCATTTTGTCCGTGGTGGTTCCTGAAATCACGTCTGACTCTTT 1259
Query 1260 TGATTGGTCGTGTAGTAACGAGGCACCAGCAAGACACAGTCTCATCTTCCGGGGTTTAGT 1319
||||||| ||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||
Sbjct 1260 TGATTGGGCGTGTAGCAACGAGGCACCGGCAAGACACAGTCTCATCTACCGTGGTTTAGT 1319
Query 1320 CCCAGTTCTGTACGCTGGTTCGGCTAGAGCCTCGATAGACGAGTCAACTGAAGAAACGAT 1379
||| || ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| |
Sbjct 1320 CCCGGTGCTGTATGCTGGATCGGCTAGAGCCTCGATCGACGAGTCAACAGAAGAAACTCT 1379
Query 1380 CGAGTTCGCGACAGAGTACGGGAAAAAGAAGCAACTGTGCAAGACCGGAGACTCTGTTGT 1439
|||||||||| ||||||| || |||||||||||||| |||||||||||||||||||||||
Sbjct 1380 CGAGTTCGCGTCAGAGTATGGTAAAAAGAAGCAACTCTGCAAGACCGGAGACTCTGTTGT 1439
Query 1440 GGCTCTCTTCCGAACAGGTAACGCCATTGTTATCAAGATCTTGACAGTCAAGTGA 1494
|||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct 1440 GGCTCTCTTCCGTACAGGTAACGCTATTGTTATCAAGATCTTGACCGTCAAGTGA 1494
> AT5G56350.1 | Symbols: | Pyruvate kinase family protein | chr5:22820006-22822766
REVERSE LENGTH=1982
Length=1982
Score = 1391 bits (753), Expect = 0.0
Identities = 1258/1500 (84%), Gaps = 42/1500 (3%)
Strand=Plus/Plus
Query 16 AGGCCAAAGACGAAGATCGTGTGCACACTCGGGCCAGCTTCCAGATCTG-TCTCAATGGT 74
||||| |||||||||||||| || || || || |||||||||||||||| || | |||||
Sbjct 256 AGGCCGAAGACGAAGATCGTTTGTACTCTAGGTCCAGCTTCCAGATCTGTTC-CGATGGT 314
Query 75 CGAGAAGCTTCTTATGGCGGGGATGAGCGTGGCTCGCTTCAACTTT-TCTCATGGATCTT 133
|||||||||||||| ||| || |||| ||| ||||| ||||| ||| ||||||||||||
Sbjct 315 CGAGAAGCTTCTTAGGGCTGGTATGAACGTTGCTCGTTTCAA-TTTCTCTCATGGATCTC 373
Query 134 ACGAATATCATCAGGAGACTCTCGACAATCTTCGTCAAGCCATGCTTAATACTGGGATTC 193
| ||||| ||||| ||||||||||| ||||||| |||||| |||||||| ||||||||||
Sbjct 374 ATGAATACCATCAAGAGACTCTCGATAATCTTCATCAAGCTATGCTTAACACTGGGATTC 433
Query 194 TCTGTGCTGTCATGCTCGATACCAAGGGACCAGAGATTCGAACTGGGTTCTTGAAGGATG 253
||||||| ||||||||||| |||||||| ||||| || ||||| ||||||||||| ||||
Sbjct 434 TCTGTGCCGTCATGCTCGACACCAAGGGTCCAGAAATCCGAACCGGGTTCTTGAAAGATG 493
Query 254 GGAAACCTATCCAGCTCAAACAAGGCCAAGAAATCACCATTTCAACTGACTATGACATGA 313
||||||| |||||||| |||||||| ||||| ||||| ||||| |||||||||||| |||
Sbjct 494 GGAAACCAATCCAGCTGAAACAAGGACAAGAGATCACTATTTCGACTGACTATGACTTGA 553
Query 314 AGGGTGATGAGAAAACGATTTGCATGAGCTACAAGAAGTTAGC-GCAAGATGTGAACCCA 372
||||||| ||||| |||||||||||||||||||| ||||| || | ||||||||||||
Sbjct 554 AGGGTGACGAGAACACGATTTGCATGAGCTACAAAAAGTTGGCTG-TTGATGTGAACCCA 612
Query 373 GGAATGGTCATACTCTGTGCCGATGGTACCATCTCGTTACTGGTTCTCTCTTGTGACAAA 432
||||||||||| || ||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct 613 GGAATGGTCATTCTTTGTGCTGATGGTACAATCTCCTTACTGGTTCTCTCTTGTGACAAA 672
Query 433 GAAAAGGGTACCGTTCGTTGTCGTTGTGAAAACACTTCAATGCTCGGTGAGAGAAAAAAC 492
|| || ||||| || ||||| || ||||| ||| || | ||||||||||||||||| |||
Sbjct 673 GAGAACGGTACAGTCCGTTGCCGGTGTGAGAACTCTGCGATGCTCGGTGAGAGAAAGAAC 732
Query 493 GTCAATCTCCCTGGTGTCGTTGTGGATCTCCCAACTCTAACTGAGAAAGAC-AAGCAAGA 551
|| |||||||| ||||| ||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 733 GTTAATCTCCCAGGTGTTGTTGTGGATCTCCCAACTCTAACTGAGAAAGACAAAG-AAGA 791
Query 552 CATTCTTG-AATGGGGAGTTCCAAATCAAATCGATATGATTGCTCTGTCTTTTGTCAGAA 610
|| || || |||||||||| || ||||||||||| ||||||||||||||||||||||| |
Sbjct 792 CA-TCATGCAATGGGGAGTCCCGAATCAAATCGACATGATTGCTCTGTCTTTTGTCAGGA 850
Query 611 AAGGTTCAGACTTGGTACAAGTTAGGCAGCTACTCGGAAAACATG-CAAAAACCATTCTT 669
|||||||||||||||| ||||| || | || || ||||| || | |||||| |||||||
Sbjct 851 AAGGTTCAGACTTGGTTCAAGTCCGGAAACTTCTAGGAAAGCACGCCAAAAA-CATTCTT 909
Query 670 CTCATGTCAAAGGTTGAGAACCAAGAAGGTGTAGCGAATTTTGATGATATTTTGATAAAC 729
|||||||| ||||| ||||||||||||||||| || ||||||||||| |||||| | ||
Sbjct 910 CTCATGTCTAAGGTCGAGAACCAAGAAGGTGTGGCAAATTTTGATGACATTTTGGTCAAT 969
Query 730 TCGGATGCGTTT-ATGATCGCTAGAGGTGACCTTGGAATGGAGATCCCAATTGAGAAGAT 788
|| || || ||| ||||| |||||||| || || || ||||| ||||| |||||||||||
Sbjct 970 TCAGACGC-TTTCATGATTGCTAGAGGAGATCTGGGCATGGAAATCCCGATTGAGAAGAT 1028
Query 789 CTTCTTAGCTCAGAAGGTGATGATCTACAAATGCAATTTC-ATGGGGAAGCCAGTGGTCA 847
|||||||||||||||||||||||||||||||||||| || | ||| || || |||||||
Sbjct 1029 CTTCTTAGCTCAGAAGGTGATGATCTACAAATGCAACATCCA-GGGAAAACCTGTGGTCA 1087
Query 848 CAGCGACTCAGATGCTCGAGTCTATGATCAAATCCCC-ACGACCAACAAGAGCAGAAGCC 906
|||| ||||||||||||||||| ||||||||||| || | |||| |||||||| |||||
Sbjct 1088 CAGCAACTCAGATGCTCGAGTCCATGATCAAATCTCCTA-GACCCACAAGAGCCGAAGCT 1146
Query 907 ACTGATGTTGCAAACGCTGTACTCGATGGCACGGACTGTGTCATGCTCAGTGGTGAAACC 966
|| ||||| |||||||| || || ||||| || ||||||||||||||||||||||||||
Sbjct 1147 ACGGATGTAGCAAACGCAGTCCTTGATGGTACAGACTGTGTCATGCTCAGTGGTGAAACT 1206
Query 967 GCAGCAGGAGCATATCCAGAGCTTGCTGTCCGTACAATGGCCAAGATTTGTGTGGAAGCA 1026
||||| |||||||| || || || || |||||||||||||| ||||| || ||||||||
Sbjct 1207 GCAGCTGGAGCATACCCTGAACTAGCCGTCCGTACAATGGCTAAGATCTGCGTGGAAGCC 1266
Query 1027 GAGAGCACA-TTGGACTATGGAGACATCTTCAAGAGGATAATGCT-TCACGCTGCGGTCC 1084
|||||||| ||| |||| || || ||||||||||||| ||||| | || || | || |
Sbjct 1267 GAGAGCACCCTTG-ACTACGGTGATGTCTTCAAGAGGATCATGCTGT-ACTCTCCAGTTC 1324
Query 1085 CTATGAGCCCGA-TCGAGTCACTTGCTTCCTCTGCGGTCAGAACCGCTA-CTTCCTCAAG 1142
| ||||| || | ||||||||||||| || || || |||||||| |||| || | | ||
Sbjct 1325 CAATGAGTCC-ACTCGAGTCACTTGCATCTTCAGCTGTCAGAACTGCTAACT-CAGCTAG 1382
Query 1143 AGCCACTCTCATGATGGTCTTGACCAGAGGAGGCAGCACGGCGAGACTGGTGGCTAAGTA 1202
|||||||||||| |||||| | ||||||||||| ||||| || ||||| |||||||||||
Sbjct 1383 AGCCACTCTCATCATGGTCCTAACCAGAGGAGGAAGCACAGCAAGACTTGTGGCTAAGTA 1442
Query 1203 TAGACCAGGGATACCCATTCTGTCGGTGGTGGTTCCTGAAATCACGTCCGACT-CTTTTG 1261
|||||||| || || ||||| || || || |||||||| |||| |||||| |||| |
Sbjct 1443 CAGACCAGGAATGCCTATTCTATCCGTCGTTGTTCCTGAGATCAAAACCGACTTCTTT-G 1501
Query 1262 ATTGGTCGTGTAGTAACGAGGCACCAGCAAGACACAGTCTCATCTTCCGGGGTTT-AGTC 1320
| ||||| || || | || | || || |||||||| || |||||||| ||| | | ||
Sbjct 1502 ACTGGTCTTGCAGCGATGAATCCCCCGCGAGACACAGCCTTATCTTCCGTGGTCTGA-TC 1560
Query 1321 CCAGTTCTGTACGCTGGTTCGGCTAGAGCCTCGATA-GACGAGTCAACTGAAGAAACGAT 1379
||||| || |||||||| || || |||||||| | | || || ||||| |||||| | ||
Sbjct 1561 CCAGTGCTCTACGCTGGATCCGCAAGAGCCTC-ACACGATGAATCAACAGAAGAAGCTAT 1619
Query 1380 CGAGTTCGCGACAGAGTACGGGAAAAAGAA-GCAACTGTGCAAGACCGGAGACTCTGTTG 1438
|||||| || || ||||||||||| |||| | | || |||||||| ||||| || ||||
Sbjct 1620 CGAGTTTGCTACTCAGTACGGGAAAGAGAAAG-AGCTATGCAAGACTGGAGATTCCGTTG 1678
Query 1439 TGGCTCT-CTTCCGAA-CAGGTAACGCCATT--GTTATCAAGATCTTGACAGTCAAGTGA 1494
| ||||| || |||| | ||||| || || || |||||||||||||| |||||||||
Sbjct 1679 TTGCTCTACT-CCGAGTC-GGTAATGC--TTCCGTGATCAAGATCTTGACCGTCAAGTGA 1734
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73694400060
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5