BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg329122
Length=2004
Score E
Sequences producing significant alignments: (Bits) Value
AT4G25440.1 | Symbols: ZFWD1 | zinc finger WD40 repeat protein ... 1810 0.0
AT5G51980.2 | Symbols: | Transducin/WD40 repeat-like superfami... 939 0.0
AT4G25434.2 | Symbols: ATNUDT10, NUDT10 | nudix hydrolase homol... 776 0.0
> AT4G25440.1 | Symbols: ZFWD1 | zinc finger WD40 repeat protein
1 | chr4:13006727-13009608 REVERSE LENGTH=1799
Length=1799
Score = 1810 bits (980), Expect = 0.0
Identities = 1093/1148 (95%), Gaps = 6/1148 (1%)
Strand=Plus/Plus
Query 1 ATGGATTTAGATATGAACGGAGGAAACAAGAGAGTCTTTCAAAGACTAAGCGGTGGCTCG 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 127 ATGGATTTAGATATGAACGGAGGAAACAAGAGAGTCTTTCAAAGACTGGGCGGTGGCTCT 186
Query 61 AATCGGCCGACGACGGACTCGAATCAGAAGGTTTGTTTCCACTGGCGAGCTGGCCGGTGC 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 187 AATCGGCCGACGACGGACTCAAATCAGAAGGTTTGTTTCCACTGGCGAGCTGGCCGGTGC 246
Query 121 AATCGTTACCCTTGCCCTTACCTGCATAGAGAATTGCCGGGTCCGGCTCCGGGTCC--T- 177
||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |
Sbjct 247 AATCGTTACCCATGCCCTTACCTGCATAGAGAATTGCCGGGTCCGGGTTCGGGTCCAGTA 306
Query 178 TC-G--TCTACGAATAAAAGGGTCGCTGATGAATCTGGTTTTGCGGGCCCGAGTCACCGG 234
| | ||| | |||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 307 GCAGCTTCTTCAAATAAAAGGGTCGCTGATGAATCTGGGTTTGCGGGTCCGAGTCACCGG 366
Query 235 AGAGGGCCAGGATTCAGCGGGACTGCTAATAACTGGGGAAGATTCGGTGGGAACAGAACG 294
|||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 367 AGAGGGCCTGGGTTCAGCGGGACTGCTAATAACTGGGGAAGATTTGGTGGGAACAGAACG 426
Query 295 GTGACGAAGACGGAGAAACTTTGCAAATTCTGGGTTGATGGAAATTGCCCTTACGGTGAT 354
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 427 GTGACCAAGACGGAGAAACTTTGCAAATTCTGGGTTGATGGAAATTGCCCTTATGGTGAT 486
Query 355 AAATGTAGATACTTGCATTGTTGGAGCAACGGAGATAGTTTCTCCTTGTTGACGCAGCTA 414
|||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 487 AAATGTAGATACTTGCATTGCTGGAGCAAAGGAGATAGTTTCTCCTTGTTGACGCAGCTT 546
Query 415 GACGGACATCAGAAGGTTGTCACTGGGATTGCTCTGCCATCAGGATCAGATAAGCTTTAC 474
||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 547 GACGGGCATCAGAAGGTTGTTACTGGGATTGCTCTGCCTTCAGGATCAGATAAGCTTTAC 606
Query 475 ACTGCGAGTAAAGATGAAACTGTGCGGATATGGGATTGTGCTTCTGGACAGTGTACAGGT 534
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 607 ACGGCGAGTAAAGATGAAACTGTGCGAATATGGGATTGTGCTTCTGGACAGTGTACAGGT 666
Query 535 GTACTCAATCTTGGTGGGGAAGTTGGCTGCATGATTAGTGAAGGCCCCTGGCTATTGGTT 594
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 667 GTACTCAATCTTGGTGGGGAAGTTGGCTGCATCATTAGTGAAGGTCCCTGGCTATTGGTT 726
Query 595 GGCATGCCAAATCTTGTTAAGGCGTGGAATATCCAAAACAATGTAGACCTGAGTCTCACT 654
||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |
Sbjct 727 GGCATGCCAAATCTTGTTAAGGCGTGGAATATCCAAAACAATGCAGACCTGAGCCTCAAT 786
Query 655 GGACCTGTTGGCCAAGTATATTCATTGGTTGTGGGCACTGATCTACTGTTCGCTGGCACA 714
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 787 GGACCTGTTGGCCAAGTATATTCATTGGTTGTGGGTACTGATCTATTGTTCGCTGGCACA 846
Query 715 CAAGATGGGTCTATTTTGGTTTGGAAATACAATAGCACCACTAGCTGTTTTGATCCAGCT 774
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 847 CAAGATGGCTCTATTTTGGTTTGGAGATACAATAGCACCACTAGCTGTTTTGATCCAGCT 906
Query 775 GCATCATTAATGGGCCACACCCTTGCAGTTGTTTCTTTATATGTTGGGGCAAACAGACTC 834
|||||| || |||| ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 907 GCATCACTATTGGGTCACACGCTTGCAGTTGTCTCTTTATATGTTGGGGCAAACAGACTC 966
Query 835 TATTCTGGTGCCATGGACAATTCTATAAAAGTTTGGTGCCTGGATAATCTGCAGTGTATA 894
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 967 TATTCTGGTGCCATGGACAATTCTATAAAAGTTTGGAGCCTGGATAATCTGCAGTGTATT 1026
Query 895 CAAACCCTTACAGAGCATACTTCAGTTGTCATGTCTCTCATTTGCTGGGATCAGTTTCTT 954
||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1027 CAAACGCTTACAGAGCATACATCAGTTGTTATGTCTCTCATTTGCTGGGATCAGTTTCTT 1086
Query 955 CTGTCATGTTCTTTGGACAATACCGTCAAGATATGGGCTGCTACTGAAGGTGGAAACTTA 1014
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1087 CTGTCATGTTCATTGGACAATACCGTCAAGATATGGGCTGCTACTGAAGGTGGAAACTTA 1146
Query 1015 GAAGTCACATATACTCACAAAGAAGAATACGGCGTGCTAGCTCTCTGTGGTGTCCATGAT 1074
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1147 GAAGTGACATATACTCACAAAGAAGAATACGGCGTGCTAGCTCTCTGTGGCGTCCATGAT 1206
Query 1075 GCAGAAGCCAAGCCAGTATTGCTATGTTCGTGCAATGACAATTCATTGCACCTTTATGAT 1134
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 1207 GCAGAAGCCAAGCCAGTATTGCTATGTTCGTGCAATGACAATTCGTTGCACCTCTATGAT 1266
Query 1135 TTGCCATC 1142
||||||||
Sbjct 1267 TTGCCATC 1274
> AT5G51980.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:21113650-21116197 REVERSE LENGTH=1512
Length=1512
Score = 939 bits (508), Expect = 0.0
Identities = 969/1185 (82%), Gaps = 57/1185 (5%)
Strand=Plus/Plus
Query 1 ATGGATTTAGATATGAACGGAGGAAACAAGA-GAGTCTTTCAA-AGACT---AAGCGGTG 55
|||||||| ||| |||||||||||||||| | ||||| ||||| ||||| ||||||
Sbjct 181 ATGGATTTCGATTTGAACGGAGGAAACAA-ACGAGTC-TTCAACAGACTCGGTGGCGGTG 238
Query 56 GC---TCGAA-TCGGCC----G-A-CGACGGACT-CGAA-TCAGAAGGTTTGTTTCCACT 103
|| || || ||| || | | | ||||| | | || || ||||||||||||||||
Sbjct 239 GCGGGTC-AACTCGTCCGATGGCACCAACGGA-TAC-AAGACAAAAGGTTTGTTTCCACT 295
Query 104 GGCGAGCTGGCCGGTGCAATCGTTAC-CCTTGCCCTTACCTGCATAGAGAATTGCCGGGT 162
||||||| || || || ||||||| | ||||| ||||| || ||| | ||||| ||||||
Sbjct 296 GGCGAGCCGGGCGTTGTAATCGTT-CTCCTTGTCCTTATCTACATCGGGAATTACCGGGT 354
Query 163 CC-GGCTCCGGGTC-----C----TTC--G-TCTACGAATAAAAGGGTCGCTGATGAATC 209
|| || |||||||| | | | | |||||| |||||||||||||| |||||
Sbjct 355 CCTGG-TCCGGGTCAAGGTCAAGGCCCGGGTTATACGAACAAAAGGGTCGCTGAGGAATC 413
Query 210 TGGTTTTGCGGGCCCGAGTCACCGGAGAGGGCCAGGATTCAGCGGG-ACT-G-CTAATAA 266
|||||| ||||| |||||||| |||||||| || || || | ||| ||| | || ||
Sbjct 414 TGGTTTCGCGGGTCCGAGTCATCGGAGAGGACCTGGGTTTAATGGGAACTCGAGTAGTAG 473
Query 267 CTGGGGAAGATTCGGTGGGAACAGAACGGTGACGAAGACGGAGAAACTTTGCAAATTCTG 326
||||| ||||| |||||||||||||||||||||||||| |||||| ||||||| || ||
Sbjct 474 TTGGGGGAGATTTGGTGGGAACAGAACGGTGACGAAGACTGAGAAAGTTTGCAACTTTTG 533
Query 327 GGTTGATGGAAATTGCCCTTACGGTGATAAATGTAGATACTTGCATTGTTGGAGCAACGG 386
||| ||||| |||||| | ||||||||||| ||||||||||||||||||||||| || ||
Sbjct 534 GGTAGATGGGAATTGCACATACGGTGATAAGTGTAGATACTTGCATTGTTGGAGTAAAGG 593
Query 387 AGATAG-TTTCTCCTTGTTGACGCAGCTAGACGGACATCAGAAGGTTGTCACTGGGATTG 445
||| || ||| | |||||||| ||||| || || ||| ||||| |||| | ||| ||||
Sbjct 594 AGAGAGCTTT-GCGTTGTTGACTCAGCTTGATGGTCATGAGAAGCTTGTTAGTGGTATTG 652
Query 446 CTCTGCCATCAGGATCAGATAAGCTTTACACTGCG-AGTAAAGATGA-AACTGTGCG-GA 502
|| |||| || || || |||||||||||||||| | ||||||||||| | || |||| |
Sbjct 653 CTTTGCCTTCTGGTTCTGATAAGCTTTACACTG-GAAGTAAAGATGAGACCT-TGCGTG- 709
Query 503 TATGGGATTGTGCTTCTGGACAGTGTACAGGTGTACTCAATCTTGGTGGGGAAGTTGGCT 562
| ||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||
Sbjct 710 TTTGGGATTGTGCTTCTGGACAGTGTACAGGAGTACTCAAACTTGGTGGGGAAATTGGCT 769
Query 563 GCATGATTAGTGAAGGCCCCTGGCTATTGGTTGGCATGCCAAATCTTGTTAAGGCGTGGA 622
| || ||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||
Sbjct 770 GTGTGCTTAGTGAAGGCCCGTGGCTATTAGTTGGCATGCCAAACCTTGTCAAGGCGTGGA 829
Query 623 ATATCCAAAACAATG-TAGACCTGAGTCTCACTGGACCTGTTGGCCAAGTATATTCA-TT 680
|||| ||| ||||| | |||| |||||| | |||||||||||||||||| ||||| ||
Sbjct 830 ATATTGAAACCAATGCT-GACCAGAGTCTAAGTGGACCTGTTGGCCAAGTCTATTCTCTT 888
Query 681 GGTTGTGGGCACTGATCTACTGTTCGCTGGCACACAAGATGGGTCTATTTTGGTTTGGAA 740
| ||||||| |||||||| || || ||||| ||||| ||||| |||||||||| ||||
Sbjct 889 G-TTGTGGGTACTGATCTGCTCTTTGCTGGAACACAGGATGGCTCTATTTTGGCATGGAG 947
Query 741 ATACAATAGCA-CCACTAGCTGTTTTGATCCAGCTGCATCATTAATGGGCCACACCCTTG 799
||| ||| || |||||| ||||||||| ||| | || ||| | | |||||| || ||||
Sbjct 948 ATATAAT-GCTGCCACTAACTGTTTTGAACCATCAGCGTCACTGACGGGCCATACACTTG 1006
Query 800 CAGTTGTTTCTTTATATGTTGGGGCAAACAGACTCTATTCTGGTGCCATGGACAATTCTA 859
|||||||| | |||||||||||||| |||||||| ||||| ||| |||||||||| |||
Sbjct 1007 CAGTTGTTACCTTATATGTTGGGGCGAACAGACTTTATTCGGGTTCCATGGACAAAACTA 1066
Query 860 TAAAAGTTTGGTGCCTGGATAATCTGCAGTGTATACAAACCCTTACAGAGCATACTTCAG 919
||||||||||| | |||||||||| |||||||||||||| || || || ||| | ||||
Sbjct 1067 TAAAAGTTTGGAGTTTGGATAATCTACAGTGTATACAAACACTCACTGATCATTCATCAG 1126
Query 920 TTGTCATGTCTCTCATTTGCTGGGATCAGTTTCTTCTGTCATGTTCTTTGGACAATACCG 979
|||| ||||||||||||||||||||||| || ||| |||| ||||| |||||||| || |
Sbjct 1127 TTGTGATGTCTCTCATTTGCTGGGATCAATTCCTTTTGTCTTGTTCATTGGACAACACGG 1186
Query 980 TCAAGATATGGGCTGCTA-CTGAAGGTGGAAACTTAGAAGTCACATATACTCACAAAGAA 1038
| |||||||||||||| | | |||||||| || || ||||| ||||||||||||||||||
Sbjct 1187 TTAAGATATGGGCTGCAATC-GAAGGTGGCAATTTGGAAGTAACATATACTCACAAAGAA 1245
Query 1039 GAATACGGCGTGCTAGCTCTCTGTGGTGTCCATGATGCAGAAGCCAAGCCAGTATTGCTA 1098
||| | || ||||||||||| |||||||| |||||||||||||||||||| || ||| ||
Sbjct 1246 GAACATGGAGTGCTAGCTCTATGTGGTGTACATGATGCAGAAGCCAAGCCTGTTTTGTTA 1305
Query 1099 TGTTCGTGCAATGACAATTCATTGCACCTTTATGATTTGCCATCC 1143
|| | ||||||||||| | |||| ||| || || || ||||||
Sbjct 1306 TGCGCTTGCAATGACAACACCTTGCGCCTCTACGACTTACCATCC 1350
> AT4G25434.2 | Symbols: ATNUDT10, NUDT10 | nudix hydrolase homolog
10 | chr4:13003976-13005863 REVERSE LENGTH=1074
Length=1074
Score = 776 bits (420), Expect = 0.0
Identities = 475/502 (95%), Gaps = 2/502 (0%)
Strand=Plus/Plus
Query 1156 CAAGAGGCTCCTCTGATTAATGGAGTAGAACACAAGATTTGT-GAGGTACTTCCGTTTGT 1214
||||||||||||||| ||||||||||||||||||||||| | || ||||||||||||||
Sbjct 102 CAAGAGGCTCCTCTGCGTAATGGAGTAGAACACAAGATTT-TCGAAGTACTTCCGTTTGT 160
Query 1215 AGATGATGACTACGGAGGAGTGATCGTGGAGATGAAAACTCCTATGGATACTAAGTCTTT 1274
|||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 161 GGATGATGATTACGGTGGAGTCATCGTGGAGATGAAAACTCCTATGGATACTAAGAATTT 220
Query 1275 TGTTGCAGCGCTTAGATATTCATTCGAGCACTGGCGGTCACAGGGTAAAAAGGGAGTCTG 1334
||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||
Sbjct 221 CGTTGCAGCGCTTAGAGATTCATTCGAGCAGTGGCGCTTACAGGGTAAAAAGGGAGTCTG 280
Query 1335 GTTAAACTTGCCTCTCTCACACGTAAACCTCGTGGAACCTGCGGTTAAGGAAGGTTTCCG 1394
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 281 GTTGAACTTGCCTCTCTCACACGTAAACCTCGTGGAACCCGCGGTTAAGGAAGGTTTCCG 340
Query 1395 GTATCACCACGCTGAGCCAACTTACCTGATGCTAGTTTATTGGATTCCGAAAGCCGAGAG 1454
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 341 GTATCACCATGCTGAGCCAACTTACCTGATGCTAGTTTATTGGATTCCGGAAGCCGAGAG 400
Query 1455 TACTATTCCTTTGAATGCTTCCCATCGTGTTCGTGTTGGTGCTGTTGTCTTGAACCATAA 1514
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 401 TACTATTCCTTTGAATGCTTCCCATCGTGTTCGTGTAGGTGCTGTTGTCTTGAACCATAA 460
Query 1515 CAAAGAGGAAAAATACGGTAAATTACGCGGATCAGGCAACTGGAAGATCCCAACAGGAGT 1574
||||||||||||||||||| |||| |||||||||| | |||||||||||||||||||||
Sbjct 461 CAAAGAGGAAAAATACGGTTCATTATGCGGATCAGGTATCTGGAAGATCCCAACAGGAGT 520
Query 1575 TGTTGACGAGGGTGAGGAGATTTTCGCGGCAGCCATTAGAGAAGTAAAAGAAGAAACAGG 1634
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 521 TGTTGACGAGGGTGAGGAGATTTTCGCCGCAGCCATTAGAGAAGTAAAAGAAGAAACAGG 580
Query 1635 CGTAAGAAGATCCATATATCTT 1656
||||||||||||||||||||||
Sbjct 581 CGTAAGAAGATCCATATATCTT 602
Score = 540 bits (292), Expect = 2e-152
Identities = 336/358 (94%), Gaps = 0/358 (0%)
Strand=Plus/Plus
Query 1647 CATATATCTTTATATCGAGACTGAGTTTTTGGAGATTCTAGCTTTCTGTCAAACCCACGA 1706
||| |||||| | ||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 650 CATTTATCTTCAGATCGACACTGAGTTTTTGGAGATTCTAGCTTTCTGCCAAACCCACGA 709
Query 1707 GTCATTTTTTGCCAAGTCAGATTTATTCTTCGTTTGTCTCTTGAGACCTACCTCCTTTGA 1766
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 710 GTCATTTTTTGCAAAGTCAGATTTATTCTTCGTTTGTCTCTTGAGACCTACCTCCTTCGA 769
Query 1767 TATTCAAAAACAGGACTTAGAAATCGAAGCAGCTCAATGGATGCGGTTCGAGGACTCTGC 1826
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 770 TATTCAAAAACAGGACTTAGAGATCGAAGCAGCTCAATGGATGCGGTTCGAGGACTCTGC 829
Query 1827 CTCTCAACCTATCACACACAAGAACGAACTCTTAAAAGCTATTCACCGCATTTGCTCAAT 1886
||||||||||||||||||||||||||| ||||| |||| |||||||| ||||||||||||
Sbjct 830 CTCTCAACCTATCACACACAAGAACGATCTCTTCAAAGATATTCACCACATTTGCTCAAT 889
Query 1887 GAAAATGGAGAATAGCTATAGTGGTTTTTCCTCACAACATATTACAACTTTCTTTGACGA 1946
|||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||
Sbjct 890 GAAAATGGAGAAGAGCTATAGTGGTTTTTCAAAAAAACCTATTACAACTTTCTTTGACGA 949
Query 1947 CAAGTTAGGTTATCTCTACTTGAATAAACAAGAAGATATGAAAAAACATATCTCTTAA 2004
|||||||||||||||||||||||||||||||||||||||| || ||| ||| ||||||
Sbjct 950 CAAGTTAGGTTATCTCTACTTGAATAAACAAGAAGATATGGAACAACCTATTTCTTAA 1007
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 99296678010
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5