BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg329179
Length=3420
Score E
Sequences producing significant alignments: (Bits) Value
AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosp... 2636 0.0
AT1G62130.1 | Symbols: | AAA-type ATPase family protein | chr1... 1216 0.0
> AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:12801549-12808190
REVERSE LENGTH=3400
Length=3400
Score = 2636 bits (1427), Expect = 0.0
Identities = 1701/1829 (93%), Gaps = 35/1829 (2%)
Strand=Plus/Plus
Query 1611 GGGACCTCCTAAAGGGATTACAGGGAAAGTAATTTTAGTATTTGATGAGAATCCTTCAGC 1670
|||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1557 GGGACCTCCTAATGGGACTACAGGGAAAGTAATTTTAGTGTTTGATGAGAATCCTTCAGC 1616
Query 1671 TAAAGTGGGTGTTAGATTTGATAAGCCAATACCTGATGGAGTTGATCTTGGTGAACTGTG 1730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1617 TAAAGTGGGTGTTAGATTTGATAAGCCAATACCTGATGGAGTTGATCTTGGTGAACTATG 1676
Query 1731 TGAAA-CAGGACATGGGTTCTTCTGCAAAGCTACTGATCTGAAGTTCAAAAGCTCGAGTT 1789
||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1677 TGAAAGC-GGACATGGGTTCTTCTGCAAAGCTACTGATCTTCCGTTCAAAAGCTCGAGTT 1735
Query 1790 CTGAGGATCTAGCTAAATTACTTGTTAACACATTGTTTGAGGTTGTCCATACTGAGAGCA 1849
| ||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1736 TTAAGGATCTAGTTAGATTACTTGTTAACACATTGTTTGAGGTTGTCCATTCTGAGAGCA 1795
Query 1850 GAACTCGTCCGTTAATTCTATTTTTGAAAGATGCTGAGAAATCTGTTGTTGGAAA-TTCC 1908
||||| ||||||| |||||||||||||||||||||||||||||||||| |||||| || |
Sbjct 1796 GAACTTGTCCGTTTATTCTATTTTTGAAAGATGCTGAGAAATCTGTTGCTGGAAACTT-C 1854
Query 1909 GATTTGTACTCTGCGTTCCAAATCAGACTTGAATATCTCCCAGACAACGTAATTGTGATC 1968
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1855 GATTTGTACTCTGCGTTCCAAATCAGACTTGAATATCTCCCAGAAAACGTAATTGTGATC 1914
Query 1969 GGTTCACAGACACACTCTGATCATCTCATGGAGAAGGATATTGGACGACAAAAGGAGCAA 2028
|||||||||||||||| |||||||||| || ||||||||||||| |||||||| |||||
Sbjct 1915 TGTTCACAGACACACTCAGATCATCTCAAGGTGAAGGATATTGGAAGACAAAAGAAGCAA 1974
Query 2029 GGGAATGAAGTCCCACAGGCAACAGAACTTCTAGCGGAGCTCTTTGAGAATAAAGTTCCT 2088
||||| ||||||||||| |||||||||||||||||||||||||||||||||||| || ||
Sbjct 1975 GGGAAGGAAGTCCCACATGCAACAGAACTTCTAGCGGAGCTCTTTGAGAATAAAATTACT 2034
Query 2089 ATTCAAATGCCACAGGATGAGGAACTTCTTACATTGTGGAAGCATCAAATGGATCGTGAT 2148
||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 2035 ATTCAGATGCCACAGGATGAGAAACGTCTTACATTGTGGAAGCATCAAATGGATCGTGAT 2094
Query 2149 GCTGAGATTTCGAAAGTGAAGGCTAATTTCAGTCACTTGCGCATGGTGTTGGGACTATGT 2208
||||||| ||||||||||||| |||| |||| ||||||||||||||||||| ||| | ||
Sbjct 2095 GCTGAGACTTCGAAAGTGAAGTCTAACTTCAATCACTTGCGCATGGTGTTGCGACGACGT 2154
Query 2209 GGTCTGGGATGTGAAGGAATT--GA-GAC---G-C-----TGTGCATGAAGGATCTCACA 2256
||||| |||||||||||| || || ||| | | ||||| ||||||||||||||
Sbjct 2155 GGTCTAGGATGTGAAGGACTTGAGACGACGTGGTCTAGGATGTGCCTGAAGGATCTCACA 2214
Query 2257 CTTCAAAGCGACAGTGCAGAAAAGATCATTGGATGGGCTTTTAGTAACCATATAAGCAAT 2316
|||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2215 CTTCAAAGAGACAGTGTAGAAAAGATCATTGGATGGGCTTTTGGTAACCATATAAGCAAA 2274
Query 2317 AATCCTGATACTGATCCAGCTAAGGTTATTTTGTCTCGTGAGAGCATAGAATTTGGAATA 2376
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct 2275 AATCCTGATACTGATCCAGCTAAGGTTACTTTGTCTCGAGAGAGCATAGAATTTGGAATA 2334
Query 2377 GGACTCTTACAGGGTGATCTTAAAGGTTCTACGAGCTCAAAGAGGTCTCTCAAGGACATT 2436
|||||||||||| |||||| ||||||||||||||||| || | | |||||||||
Sbjct 2335 GGACTCTTACAGAATGATCTAAAAGGTTCTACGAGCTC-AA-A-G------AAGGACATT 2385
Query 2437 GTGACAGAAAATGAGTTTGAAG-AGAGGCTTCTAAGTGATGTAATTCTGCCCAGTGACAT 2495
||| |||||||| ||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 2386 GTGGTAGAAAATGTGTTTG-AGAAGAGGCTTCTAAGTGATGTAATTCTGCCCAGTGACAT 2444
Query 2496 TGATGTTACATTTGATGACATTGGGGCACTTGAGAAAGTCAAAGATACCTTAAAGGAACT 2555
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2445 TGATGTTACATTTGATGACATTGGGGCACTTGAGAAAGTCAAAGATATCTTAAAGGAACT 2504
Query 2556 GGTTATGCTCCCTTTACAACGGCCTGAACTTTTCTGCAAGGGGCAATTAACAAAGCCTTG 2615
||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2505 GGTTATGCTTCCTTTACAACGGCCTGAACTTTTCTGCAAGGGGGAATTAACAAAGCCTTG 2564
Query 2616 TAAAGGAATTCTCTTATTTGGACCTCCTGGTACTGGAAAGACCATGCTTGCAAAAGCAGT 2675
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2565 TAAAGGAATTCTTTTATTTGGACCTCCTGGAACTGGAAAGACCATGCTTGCAAAAGCAGT 2624
Query 2676 GGCAAAGGAAGCTGATGCGAACTTCATCAACATCTCAATGTCAAGCATCACATCTAAGTG 2735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2625 GGCAAAGGAAGCTGATGCGAACTTCATCAACATCTCAATGTCAAGCATCACATCTAAGTG 2684
Query 2736 GTTTGGTGAGGGTGAGAAGTATGTCAAAGCTGTCTTTTCTTTGGCCAGTAAAATGTCCCC 2795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2685 GTTTGGTGAGGGTGAGAAGTATGTCAAAGCTGTCTTTTCTTTGGCCAGTAAAATGTCCCC 2744
Query 2796 TTGCGTTATCTTTGTGGACGAGGTGGACAGCATGCTAGGCCGAAGAGAAAACCGACAGGG 2855
| ||||||||||||||||||||||||||||||||||||||||||||||| ||| || | |
Sbjct 2745 TAGCGTTATCTTTGTGGACGAGGTGGACAGCATGCTAGGCCGAAGAGAACACCCAC-GTG 2803
Query 2856 A-CATGAAGGCAT-GCGGAAGATGAAAAATGAGTTCATGATGCATTGGGACGGTCTAACG 2913
| ||||||| | | ||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 2804 AACATGAAGCC-TCGCGGAAGATTAAAAATGAGTTCATGATGCATTGGGACGGTCTTACG 2862
Query 2914 ACTAAGGAAATGGAACGTGTTCTGGTTCTTGCAGCCACAAATCGGCCTTTTGACCTTGAT 2973
||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2863 ACTCAGGAAAGGGAACGTGTTCTGGTCCTTGCAGCCACAAATCGGCCTTTTGACCTTGAT 2922
Query 2974 GAGGCTGTCATTAGACGGTTGCCCAGTAGGTTGATGGTGGGACTACCAGATACATCAAAT 3033
|||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 2923 GAGGCTGTTATTAGACGGTTGCCCCGTAGGTTGATGGTGGGACTACCAGATACTTCAAAT 2982
Query 3034 AGAGCATATATATTAAAGGTTATACTTGCAAAAGAAAACGTGTCCCCTGGTTTGGACATT 3093
||||||| |||||||||||||||||||||||||||| || ||||||||| |||||| |||
Sbjct 2983 AGAGCATTTATATTAAAGGTTATACTTGCAAAAGAAGACTTGTCCCCTGATTTGGATATT 3042
Query 3094 AATTG-GATTGCTAGTATGACTAATGGATATTCTGGAAGTGATCTTAAGAATCTATGTGT 3152
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3043 GGT-GAGATTGCTAGTATGACTAATGGATATTCTGGAAGTGATCTTAAGAATCTATGTGT 3101
Query 3153 TACTGCTGCCCACCGTCCAATCAAGGAGCTGTTGGAGAAGGAAAAAAGAGAGCGAGATGC 3212
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 3102 TACTGCTGCCCACCGTCCAATCAAGGAGATATTGGAGAAGGAAAAAAGAGAGCGAGATGC 3161
Query 3213 TGCTCTGGCTGAAGGCAAAGTTCCTCCAGCTCTAAGAGGAAGTTCTGATCTCCGAGCTTT 3272
|||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 3162 TGCTCTGGCTCAAGGCAAAGTTCCTCCACCTCTAAGTGGAAGTTCTGATCTCCGAGCTTT 3221
Query 3273 AAACATGGAGGATTTCAGATACGCACATGAGCGGGTGTGTGCGAGCGTCTTATTAGAGTC 3332
|||| |||||||||||||| |||||||| || |||||| ||||||||||| || ||||||
Sbjct 3222 AAACGTGGAGGATTTCAGAGACGCACATAAGTGGGTGTCTGCGAGCGTCTCATCAGAGTC 3281
Query 3333 TGCGAAC-ATGACAACGCTTCAACAATGGAACGAACTCTACGGGGAAGGTGGATCCAGAA 3391
||||| | |||||| ||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct 3282 TGCGA-CTATGACAGCGCTTCAACAATGGAACAAACTCCACGGGGAAGGTGGATCCGGAA 3340
Query 3392 AGCAGCAATCATTCAGCTTCTACATGTAG 3420
|||||||||||||||||||||||| ||||
Sbjct 3341 AGCAGCAATCATTCAGCTTCTACACGTAG 3369
Score = 706 bits (382), Expect = 0.0
Identities = 468/509 (92%), Gaps = 7/509 (1%)
Strand=Plus/Plus
Query 789 CCATGAATCCAGTAAGAGCCACCAAGCGCCAGAGTCTG-TGGTCCAAGTTGACGGCATGG 847
||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 684 CCATGCATCCAGTAAGAGCCACCAAGCGCCAGAGTC-GATGGTCCAAGTTGACGGCATGG 742
Query 848 GAGCAGTCAGTAC---CCACAACCAAGATTCCAAAATGCAGATATTAGATGAGAAGAACG 904
|| | | | | |||||||||||||||||||| ||||||| |||||||| ||||
Sbjct 743 AAGGAATTTTTTCTGTTAACAACCAAGATTCCAAAATGGAGATATTGGATGAGAAAAACG 802
Query 905 AGGTGACAAGTAATTCACAACAAGCTTCAACATCAGGCAATGGTCTGCAATCTGCAATAG 964
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 803 AGGTGACAAGTAATTCACAACAAGCTTCAACATCAGGCAATGGTCTGCAATCTGCAATAT 862
Query 965 TCAGAGAAGGCATTCAAGCTGGTATTGTTGA-AGGCGAAAACTTGGAAGTTTCAATCAAA 1023
||||||||| ||||||||||||| ||||| | |||||||||| ||||||||||| |||||
Sbjct 863 TCAGAGAAGCCATTCAAGCTGGTTTTGTT-AGAGGCGAAAACATGGAAGTTTCATTCAAA 921
Query 1024 ACTTTTCCCTATTATTTGAGTGAATATACAAAGGCTACCTTAATACATGCTTCATTTATA 1083
| |||||||||||||||||||||||||||||||||| ||||| || ||||||||| ||||
Sbjct 922 AATTTTCCCTATTATTTGAGTGAATATACAAAGGCTGCCTTATTATATGCTTCATATATA 981
Query 1084 CATCTGAAGAAAAAAGAATATGCCCACTTTGTCTCCGACATGACCCATCTGAATCCAAGG 1143
|||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||||||
Sbjct 982 CATCTGAAGAAAAAAGAATATGTCCAATTTGTCTCCGACATGACCCCTATGAATCCAAGG 1041
Query 1144 ATATTGCTTTCTGGTCCCGCAGGGTCTGAAATATACCAAGAGACGTTAGCTAAAGCACTT 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1042 ATATTGCTTTCTGGTCCCGCAGGGTCTGAAATATACCAAGAGACGTTAGCTAAAGCACTT 1101
Query 1204 GCCAATGACCTGGACGCGAAATTGCTAATATTTGACAGCCATTCAATTTTGGGGTTTACA 1263
||| |||||| || |||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1102 GCCCGTGACCTCGAGGCGAAATTGCTAATATTTGACAGCTATCCAATTTTGGGGTTTACA 1161
Query 1264 AGAGGAAAGGTTTTGCATCTACACTTATT 1292
||||||||| |||||||||||||||||||
Sbjct 1162 AGAGGAAAGTTTTTGCATCTACACTTATT 1190
Score = 501 bits (271), Expect = 2e-140
Identities = 577/711 (81%), Gaps = 75/711 (11%)
Strand=Plus/Plus
Query 1 ATGGTGTCTCCGGGACGGAGTGAATCTACCTCCGGCGACAACAATTCACCCCCTCCCGAC 60
|||||||| |||||||||||||| |||||||||||||| ||||| | | ||| ||||||
Sbjct 1 ATGGTGTCACCGGGACGGAGTGATTCTACCTCCGGCGAGAACAA-T-A-ACCCGCCCGAC 57
Query 61 GGAAGCAGCGAG-AAGAGACCTTCACCTTCTCCAGCAGATAAATCTCCATCCAAACGCCA 119
|||||||||| | |||||| || || ||||||| ||||||||||||||||||||||||||
Sbjct 58 GGAAGCAGCG-GCAAGAGATCTCCATCTTCTCCCGCAGATAAATCTCCATCCAAACGCCA 116
Query 120 AAAGTTGGAAGGTGGCGGCGCTTCGGCGGCTAAAGAAACCGATACACTACCTCCTGCGGA 179
|||||||||| | | ||| | | |||||||||||||||| ||||
Sbjct 117 AAAGTTGGAA---------G-AT-GGC-G-----G----CGATACACTACCTCCTTCGGA 155
Query 180 TTCTGGTAAATGCGTGTTAGGCGACAATACTTCAACCTCCGAAGACGCCAAGATTGATGC 239
|||| ||||||||||||||||||||| |||| ||||||| | |||| || ||||||||||
Sbjct 156 TTCTAGTAAATGCGTGTTAGGCGACACTACTCCAACCTCTGGAGACTCCCAGATTGATGC 215
Query 240 CTATGCGGTGGCTGTTACGACGGCGCAACCACCACCGGTTGCGGAAGGCTCAACACCGAT 299
|| ||||| ||||| ||||||| ||||||||||||| ||||| | | | | ||||
Sbjct 216 CTCTGCGGCGGCTGCTACGACGTCGCAACCACCACCTGTTGC-----G--C-A-AGCGAT 266
Query 300 TTTGGAAGAGAATGCAAATTTTGCAAGATGGATATACT-TACACAGTAAGTTTGAGTTCC 358
|||| ||||||| |||| ||||| |||||||| ||| | ||||||||| ||||||| ||
Sbjct 267 TTTGCAAGAGAAGGCAAGTTTTGAAAGATGGACATA-TGTACACAGTAGGTTTGAGAACC 325
Query 359 CGTGGTGTCGATTGATATCACAGTCTGCACAGTATCCAAGCATTGAAATTTTTCAATCAA 418
|||||||||||||| |||||||||||||||||||||| | | | | || ||
Sbjct 326 CGTGGTGTCGATTGCTATCACAGTCTGCACAGTATCC-A--A--G--------C-AT-AA 370
Query 419 CCTACACTGTTGGTTCTAGTGTAACCTGCTCTTTCACATTCGAAGACCGG-GAACTCAGT 477
||| | || ||||| | | | || |||| |||| ||| ||| |||||||||
Sbjct 371 ---ACA-T-TT--TTCTA---T---CAG-TC-TTCAAATTCTTAGA-CGGAGAACTCAGT 414
Query 478 TCATACTTGTTCAAGATCACAAGAATTCAGCGCAAAGGCAATGTTGTAGCGGTTCTAGAG 537
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 415 TCATACTCGTTCAAGATCACAAGAATTCAGCGCAAAGGCAATGTTTTAGCGGTTCTAGAG 474
Query 538 ACTACAGGAAAGAGGGGATATGTGTTGG-TAAACAGAATAT-ATGTAGAGAAGAA-AGTC 594
|| | ||||| | ||| || ||| || ||||| ||| || ||| ||| ||| | ||
Sbjct 475 ACCATGGGAAACAATGGACATATGT-GGATAAACGGAA-ATTATGCCGAGGGGAATA-TC 531
Query 595 AACCATGTGCTAAACTCTGGTGACGAAGTGATATATCAGCAACTGCCTAAAGTTCCAGCA 654
|||||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||||
Sbjct 532 AACCATGTGCTAAACTCTGGTGACGAAGTGGTATATCAGCAAATGCCTATAGTTGCAGCA 591
Query 655 AAAGCTGGTTCAGTTCAGGTTCCTGCAGGAAAGTTTCTAGAGTTAGAGAGA 705
||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 592 AAACCTGGTTCAGTTCAGGTTCCTGCAGGAAAGTTTCTAGACCTAGAGAGA 642
Score = 316 bits (171), Expect = 7e-85
Identities = 207/224 (92%), Gaps = 3/224 (1%)
Strand=Plus/Plus
Query 1300 GCTCTGGCTGCTAAGGAAATTGAGTCACTGAGGGATGGACTTGCTTCTAATAAGTCATGT 1359
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1225 GCTCTGACTGCTAAGGAAGTTGAGTCACTGAGGGATGGACTTGCTTCTAATAAGTCATGT 1284
Query 1360 AAGCTTCCCAATCAGAGTATTGAGCTCATTGATCAAGGGAAAAGCCCGGATTTGTCAGCT 1419
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1285 AAGCTTCCCAATCAGAGTATTGAGCTCATTGATCAAGGGAAAAGCTCGGATTTGTCAGCC 1344
Query 1420 GGTGGAGGAGTTGCTTCTAGCCCTTCTCCGGCTGCTTCTTCT-AGTTCAGACTCACAGCT 1478
|||||||||||||||||||||| |||||| |||||||||||| | |||||||||||||||
Sbjct 1345 GGTGGAGGAGTTGCTTCTAGCCTTTCTCCTGCTGCTTCTTCTGA-TTCAGACTCACAGCT 1403
Query 1479 AAATTTGGAACCGGAGACTTTGCCTCTTTCAAAGATTC-TACTT 1521
| | ||||| ||||||||||| |||| |||| || || |||||
Sbjct 1404 ACAGTTGGAGCCGGAGACTTTACCTCGTTCAGTGAATCATACTT 1447
Score = 117 bits (63), Expect = 7e-25
Identities = 72/76 (95%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 1510 AAGATTCTACTTCAATCTTCTTGGATTTCTGGTTGGCGGATACTTCATTTGaaa-aaaaa 1568
|||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||
Sbjct 1486 AAGATTCTACTTCAATCTTCTTGGATTTCTGGTTTGCGGATACTTCATTTGGAAGAAAAA 1545
Query 1569 aaCACTTGCAGGTGAC 1584
|||||||||||| |||
Sbjct 1546 AACACTTGCAGGGGAC 1561
> AT1G62130.1 | Symbols: | AAA-type ATPase family protein | chr1:22962340-22968920
REVERSE LENGTH=3157
Length=3157
Score = 1216 bits (658), Expect = 0.0
Identities = 1147/1368 (84%), Gaps = 94/1368 (7%)
Strand=Plus/Plus
Query 2058 TCTAGCGGAGCTCTTTGAGAATAAAGTTCCTAT-TCAAATGCCACAGGATGAGGAACTTC 2116
|||| |||| ||||||| |||||||||| |||| | | |||||||||| |||||||||||
Sbjct 1830 TCTAACGGATCTCTTTGTGAATAAAGTTACTATAT-ACATGCCACAGGGTGAGGAACTTC 1888
Query 2117 TTACAT-TGTGGAAGCATCAAATGGATCGTGATGCTGAGA-TTTCGAAAGTGAAGGCTAA 2174
||| || | |||||| |||| |||||||||||||||||| ||| |||| ||||||||||
Sbjct 1889 TTAAATCT-TGGAAGTATCATTTGGATCGTGATGCTGAGACTTT-GAAAATGAAGGCTAA 1946
Query 2175 TTTCAGTCACTTGCGCATGGTGTTGGGACTATGTGGTCTGGGA-TGTGAAGGAATTGAGA 2233
|| || ||||||||||||||||||||||| ||||||| | || |||||||| |||||||
Sbjct 1947 TTACAATCACTTGCGCATGGTGTTGGGACGATGTGGTAT-AGAGTGTGAAGGCATTGAGA 2005
Query 2234 CGCTGTGCATGAAGGATCTCACACTTCAAAGCGACAGTGCAGAAAAGATCATTGGATGGG 2293
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 2006 CGCTGTGCATGAAGGATCTCACACTTCGAAGAGACAGTGCAGAAAAGATCATTGGATGGG 2065
Query 2294 CTTTTAGTAACCATAT-AAGCAATAATCCTGATACTGATCC--A-GCTAAGGTTATTTTG 2349
|| ||||| ||||||| ||| |||||||| | ||||||| | | || ||||||||||
Sbjct 2066 CTCTTAGTCACCATATAAAG-TCTAATCCTGGTGCTGATCCAGATGTTAGGGTTATTTTG 2124
Query 2350 TCTCGTGAGAGCATAGAATTTGGAATAGGACTCTTACAGGGTGATCTTAAAGGTTCTACG 2409
|||| ||||||| || ||| |||||||| |||||| | | ||| | | |
Sbjct 2125 TCTCTTGAGAGCTTAAAATGTGGAATAGAACTCTT-----G-G-----AAA---T-T--G 2167
Query 2410 AGCTCAAAGAGGTCTCTCAAGGACATTGTGACAGAAAATGA-GTTTGAAGAGAGGCTTCT 2468
| || |||| |||||||||||||||||||||||||||| | ||||| | | | |
Sbjct 2168 A-ATCTAAGAAGTCTCTCAAGGACATTGTGACAGAAAAT-ACGTTTG-A-A-A------T 2216
Query 2469 AAGTGATGTAATTCTGCCCAGTGACATTGATGTTACATTTGATGACATTGGGGCACTTGA 2528
||||||| | |||| ||||||||| |||| ||||||||| ||||||||||||||||||||
Sbjct 2217 AAGTGATATTATTCCGCCCAGTGAAATTGGTGTTACATTCGATGACATTGGGGCACTTGA 2276
Query 2529 GAAAGTCAAAGATACCTTAAAGGAACTGGTTATGCTCCCTTTACAACGGCCTGAACTTTT 2588
||| |||||||| || |||||||||||||||||||| ||||| ||| |||||||||||||
Sbjct 2277 GAATGTCAAAGACACTTTAAAGGAACTGGTTATGCTTCCTTTTCAATGGCCTGAACTTTT 2336
Query 2589 CTGCAAGGGGCAATTAACAAAGCCTTGTAAAGGAATTCTCTTATTTGGACCTCCTGGTAC 2648
|||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||
Sbjct 2337 CTGCAAGGGGCAATTAACAAAGCCTTGTAACGGAATTCTCTTATTTGGACCTTCTGGAAC 2396
Query 2649 TGGAAAGACCATGCTTGCAAAAGCAGTGGCAAAGGAAGCTGATGCGAACTTCATCAACAT 2708
||||||||||||||||||||| |||||||||| |||||||| ||| ||| ||||||||||
Sbjct 2397 TGGAAAGACCATGCTTGCAAAGGCAGTGGCAACGGAAGCTGGTGCTAACCTCATCAACAT 2456
Query 2709 CTCAATGTCAAGCATCACATCTAAGTGGTTTGGTGAGGGTGAGAAGTATGTCAAAGCTGT 2768
||||||||||| ||||||| ||||||||||||| ||||||||||||||
Sbjct 2457 GTCAATGTCAAG------------GTGGTTTAGTGAGGGTGAGAAATATGTCAAAGCTGT 2504
Query 2769 CTTTTCTTTGGCCAGTAAAATGTCCCCTTGCGTTATCTTTGTGGACGAGGTGGACAGCAT 2828
|||||| ||||| |||||||| ||||| || |||||||| ||||||||||||| |||||
Sbjct 2505 CTTTTCGTTGGCTAGTAAAATTTCCCCAAGCATTATCTTTTTGGACGAGGTGGAAAGCAT 2564
Query 2829 GCTAGGCCGAAGAGAAAACCGACAGGGACATGAAGGCATGCGGAAGATGAAAAATGAGTT 2888
|||| | | | || || |||| | ||||| ||||||||||||
Sbjct 2565 GCTA---C---------A---TC-GGTAC----AGGC-T---GAAGACGAAAAATGAGTT 2600
Query 2889 CATGATGCATTGGGACGGTCTAACGACTAAGGAAATGGAACGTGTTCTGGTTCTTGCAGC 2948
||| || ||||||||||||| | ||| || |||| ||||||||||||||||||||||||
Sbjct 2601 CATAATAAATTGGGACGGTCTGAGGACAAATGAAAAGGAACGTGTTCTGGTTCTTGCAGC 2660
Query 2949 CACAAATCGGCCTTTTGACCTTGATGAGGCTGTCATTAGACGGTTGCC-CAGTAGGTTGA 3007
||||||| | |||||||||||||| ||||||||||||||| ||||||| || ||||||||
Sbjct 2661 CACAAATAGACCTTTTGACCTTGACGAGGCTGTCATTAGAAGGTTGCCTCA-TAGGTTGA 2719
Query 3008 TGGTGGGACTACCAGATACATCAAA-TAGAGCATATATATTAAAGGTTATACTTGCAAAA 3066
||||||||||||||||| | || | |||| || | ||||| ||||| |||||| |||||
Sbjct 2720 TGGTGGGACTACCAGATGC-TCGTAGTAGATCAAAGATATTGAAGGTGATACTTTCAAAA 2778
Query 3067 GAAAACGTGTCCCCTGGTTTGGACATTAATT-GGATTGCTAGTATGACTAATGGATATTC 3125
||| || ||||||||| ||| || ||| || || ||||||||||||| |||||||||||
Sbjct 2779 GAAGACTTGTCCCCTGATTTCGATATTGATGAGG-TTGCTAGTATGACAAATGGATATTC 2837
Query 3126 TGGAAGTGATCTTAAGAATCTATGTGTTACTGCTGCCCACCGTCCAATCA-AGGAGCT-G 3183
||||| ||||||||||||||||||||||||||||||| ||||| ||||| || || | |
Sbjct 2838 TGGAAACGATCTTAAGAATCTATGTGTTACTGCTGCCCGCCGTCGAATCATAG-AGATAG 2896
Query 3184 TTGGAGAAGGAAAAAAGAGAGCGAGATGCTGCTCTGGCTGAAGGCAAAGTTCCTCCAGCT 3243
| ||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||
Sbjct 2897 T-GGAGAAGGAAAAAAGTGAGCGAGATGCTGCTGTGGCTGAAGGCAGAGTTCCTCCAGCT 2955
Query 3244 CTAAGAGGAAGTTCTGATCTCCGAGCTTTAAACATGGAGGATTTCAGATACGCACAT-GA 3302
||| ||| ||||||||||||||| |||||| ||||||||||||||| |||||| | ||
Sbjct 2956 GGAAGTGGAGGTTCTGATCTCCGAGTTTTAAAAATGGAGGATTTCAGAAACGCAC-TCGA 3014
Query 3303 GCGGGTGTGTGCGAGCGTCTTATTAGAGTCTG-CGAACATGACAACGCTTCAACAATGGA 3361
|| |||| || |||| ||| || | |||||| | ||||||||| |||||| ||||||||
Sbjct 3015 GCTGGTGAGTATGAGCATCTCATCAAAGTCTGTC-AACATGACAGCGCTTCGACAATGGA 3073
Query 3362 ACGAACTCTACGGGGAAGGTGGATCCAGAAAGCA-GCAATCATTCAGC 3408
||||| ||||||||||||||||||||||| | | | |||||||||||
Sbjct 3074 ACGAAGACTACGGGGAAGGTGGATCCAGAAGGAATG-AATCATTCAGC 3120
Score = 433 bits (234), Expect = 7e-120
Identities = 353/410 (86%), Gaps = 10/410 (2%)
Strand=Plus/Plus
Query 1611 GGGACCTCCTAAAGGGATTACAGGGAAAGTAATTTTAGTATTTGATGAGAATCCTTCAGC 1670
|||||| ||| | ||| ||| |||||||||| | ||||||||||||||||||||||||||
Sbjct 1425 GGGACCACCTTATGGGTTTATAGGGAAAGTACTGTTAGTATTTGATGAGAATCCTTCAGC 1484
Query 1671 TAAAGTGGGTGTTAGATTTGATAAGCCAATACCTGATGGAGTTGATCTTGGTGAACTGTG 1730
||||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||
Sbjct 1485 TAAAGTGGGTGTTAGATTTGAGAATCCAGTACCTGATGGAGTTGATCTTGGTCAACTGTG 1544
Query 1731 TGAAACAGGACATGGGTTCTTCTGCAAAGCTACTGATCTGAAGTTCAAAAGCTCGAGT-T 1789
||||| ||||||||||||||||||| ||||||||||| ||||| |||||||| | |
Sbjct 1545 TGAAATGGGACATGGGTTCTTCTGCAGTGCTACTGATCTTCAGTTCGAAAGCTCG-GCAT 1603
Query 1790 CTGAGGATCTAGCTAAATTACTTGTTAACACATTGTTTGAGGTTGTCCAT-ACTGAGAGC 1848
|||| |||||| | |||||||||||| || |||||||||||||| |||| | | |||||
Sbjct 1604 CTGACGATCTAAATGAATTACTTGTTACCAAATTGTTTGAGGTTGCCCATGA-TCAGAGC 1662
Query 1849 AGAACTCGTCCG-TTAATTCTATTTTTGAAAGATGCTGAGAAATCTGTTGTTGGAAATTC 1907
|||||| ||||| ||| || |||||||||||||||||||||||| | |||||||||||||
Sbjct 1663 AGAACTTGTCCGGTTA-TTATATTTTTGAAAGATGCTGAGAAATATTTTGTTGGAAATTC 1721
Query 1908 CGATTTGTACTCTGCGTTCCAAATCAGACTTGAA-T-ATCTCCCAGACAACGTAATTGTG 1965
| |||| | |||||| ||| ||| || ||||||| | ||||| ||| ||| ||||||||
Sbjct 1722 CCATTTTTGCTCTGCATTCAAAAGCAAACTTGAAGTTATCTC--AGATAACCTAATTGTG 1779
Query 1966 ATCGGTTCACAGACACACTCTGATCATCTCATGGAGAAGGATATTGGACG 2015
||| |||| |||||||| |||||| ||| || |||||||| |||||||||
Sbjct 1780 ATCTGTTCCCAGACACATTCTGATAATCCCAAGGAGAAGGGTATTGGACG 1829
Score = 248 bits (134), Expect = 3e-64
Identities = 340/431 (79%), Gaps = 47/431 (11%)
Strand=Plus/Plus
Query 847 GGAGCAGTCAGT-ACCCACAACCAAGATTCCAAAATGCAGATATTAGATGA-GAAGAACG 904
|||| ||||| | | |||||||||||||||||||||| ||||||||||||| ||| ||||
Sbjct 790 GGAGTAGTCA-TCAGCCACAACCAAGATTCCAAAATGGAGATATTAGATGAGGAA-AACG 847
Query 905 AGGTGACAAGTAATTCACAAC-AAGCTTCAACATCAGGCAATGGTCTGCAATCTGCAATA 963
|||||||||| || || | || | ||| | ||| | |||||| | |
Sbjct 848 AGGTGACAAG-AA---AC--CGGAG-GGC-ACA--A--CAA--G-CTGCAA-----AGT- 886
Query 964 GTCAGAGAAGGCATTCAAGCTGGTATTGTTGAAGGCGAAAA-CTTGGAAGTTTCAATC-A 1021
|||| ||| |||| ||||||||||||||| ||| |||| |||||| ||||| || |
Sbjct 887 -TCAGGGAATATATTCGAGCTGGTATTGTTGACGGC-AAAAGATTGGAATTTTCATTCGA 944
Query 1022 AAACTTTTCCCTATTATTTGAGTGAATATACAAAGGCTACCTTAATA-CATGCTTCATTT 1080
||| |||||| |||||||||||||| |||||||| | |||| || | || |||| |
Sbjct 945 AAA-TTTTCCTTATTATTTGAGTGAGCATACAAAGTATGTCTTACTAGC-TGTTTCAGAT 1002
Query 1081 ATACATCTG---AAGA--AA-AAAGAATATG-CCCACTTTGTC-TCCGACATGACCCA-T 1131
|| |||||| |||| || | || ||||| |||| | || | |||||| ||| ||| |
Sbjct 1003 ATGCATCTGAATAAGATGAATATAGGATATGCCCCA-TATG-CATCCGACTTGA-CCATT 1059
Query 1132 CTGAATCCAAGGATATTGCTTTCTGGTCCCGCAGGGTCTGAAATATACCAAGAGACGTTA 1191
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 1060 TTGAATCCAAGGATATTGCTTTCTGGTCCTGCAGGGTCTGAAATATACCAAGAGATATTA 1119
Query 1192 GCTAAAGCACTTGCCAATGACCTGGAC-GCGAAATTGCTAATATTTGACAGCCATTCAAT 1250
|||||||||||||||||| | | | |||||||||||||||||||||||| || ||||
Sbjct 1120 GCTAAAGCACTTGCCAATT-CATTCAATGCGAAATTGCTAATATTTGACAGCAATCCAAT 1178
Query 1251 TTTGGGGTTTA 1261
||||||| |||
Sbjct 1179 TTTGGGGGTTA 1189
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 170216437599
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5