BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg329184
Length=2829
Score E
Sequences producing significant alignments: (Bits) Value
AT4G24800.1 | Symbols: | MA3 domain-containing protein | chr4:... 3369 0.0
AT4G24805.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 1158 0.0
> AT4G24800.1 | Symbols: | MA3 domain-containing protein | chr4:12781916-12785197
FORWARD LENGTH=2658
Length=2658
Score = 3369 bits (1824), Expect = 0.0
Identities = 1981/2059 (96%), Gaps = 2/2059 (0%)
Strand=Plus/Plus
Query 1 ATGGAGGGTTTCCTAACGGATGAGCAGAGAGAGATGATGAAAGTTGCTACACAGACTGCA 60
||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||
Sbjct 255 ATGGAGGGTTTCCTAACGGATCAGCAGAGAGAGATGATGAAAGTTGCAACTCAGACTGCA 314
Query 61 GATGATCTTCCACCCTCACAAAAACCTCACTCGGTTTTGCTTGAGCATCTCCCTAAAGTA 120
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
Sbjct 315 GATGATCTTCCACCCTCACAAAAACCTCACTCGGTTTTACTTGAGCATCTGCCTAAACCA 374
Query 121 TCTGCTGGTGGTAAAGCTTCTGGTGCGTCAAATGCTGTGAAGCACAGAAGGTCTCATGCG 180
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 375 TCTGGTGGTGGGAAAGCTTCTGGTGCGTCAAATGCTGTGAAGCACAGAAGGTCTCATGCG 434
Query 181 GGGAGGTCTATCCGATCTAAGAAGGATGGGGGTGCTGGGAAAGGAAATTGGGGAAAACTT 240
|| |||||||| || |||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 435 GGAAGGTCTATTCGCTCTAAGAAGGATGGAGGTGGTGGGAAAGGAAATTGGGGAAAACTT 494
Query 241 ATTGACACTGACGGAGACTATCACATTGACCGGAATGATCCAAATTATGACAGTGGAGAG 300
||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 495 ATTGACACTGATGGAGACTATCACATTGACCCGAATGATCCTAATTATGACAGTGGAGAG 554
Query 301 GAACCATTCGAGCTTGTTGGTGCAACTCTGTCAGACCCATTAGATGATTACAAGAAAGCT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 555 GAACCATTCGAGCTTGTTGGTGCAACTCTGTCAGACCCATTAGATGATTACAAGAAAGCT 614
Query 361 GCAGCTTCCATCATTAACGAATACTTCAGCACTGGTGATGTCGATGTGGCAGCAGCTGAC 420
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 615 GCAGCTTCCATCATTAACGAATACTTCAGCACCGGTGATGTTGATGTGGCAGCAGCTGAC 674
Query 421 CTCATTGAACTTGGTTCAAGTGAATATCATCCCTACTTCATCAAGCGGCTTGTCTCAGTA 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 675 CTCATTGAACTTGGTTCAAGTGAATATCATCCCTACTTCATCAAGCGGCTTGTCTCGGTA 734
Query 481 GCCATGGACAGGCATGACAAAGAGAAGGAAATGGCCTCAGTGTTGCTTTCCGCATTGTAT 540
|| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 735 GCGATGGACAGGCATGACAAAGAGAAGGAAATGGCCTCGGTTTTGCTTTCCGCATTGTAT 794
Query 541 GCTGATGTCATTAACCCGAACCAGATAAGAGATGGATTTGTCCTGCTGCTGGAATCAGCT 600
|||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 795 GCTGATGTCATTAACCCGAACCAGATAAGAGATGGATTTGTCCTGCTGCTCGAGTCAGCC 854
Query 601 GATGACTTTGTGGTGGATATACCTGATGCTGTCAATGTCCTTGCTTTGTTCCTTGCACGT 660
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 855 GATGACTTTGTGGTGGATATACCTGATGCTGTCAATGTTCTTGCTTTGTTCCTTGCACGT 914
Query 661 GCGGTTGTGGATGACATCCTTCCTCCAGCTTTTCTTCCCAGGGCGGCCAAGGCACTTCCA 720
|| || ||||||||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct 915 GCTGTCGTGGATGACATACTTCCTCCAGCTTTTCTTCCTAGGGCTGCCAAGGCACTTCCA 974
Query 721 GTAACTTCCAAAGGTTACCAGGTTGTCCAAACTGCAGAGAAAAGCTATCTATCAGCTGCA 780
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 975 ATAACTTCTAAAGGTTACCAGGTTGTCCAAACTGCAGAGAAAAGCTATCTATCAGCTGCA 1034
Query 781 CACCATGCCGAGCTCGTAGAAAGAAGATGGGGTGGACAGACTCGAACGACTGTTGAGGAA 840
|||||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1035 CACCATGCTGAGCTAGTAGAAAGAAGGTGGGGTGGACAGACTCGAACCACTGTTGAGGAA 1094
Query 841 GTCAAGAAGAAGATTGCTGACATTTTGAATGAATATGTGGAGACTGGAGAGACTTATGAG 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1095 GTCAAGAAGAAGATTGCTGACATTTTGAATGAATATGTGGAGACTGGAGAGACTTATGAG 1154
Query 901 GCATGTCGCTGCGTTAGAGAGTTGGGTGTGTCtttttttCATCATGAGGTTGTGAAGAGG 960
|||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct 1155 GCATGTCGTTGCGTAAGAGAGTTGGGTGTTTCTTTCTTTCACCATGAGGTTGTGAAGAGG 1214
Query 961 GCCTTAGTTACTGCCATGGAAAACCACGCAGCAGAAGGA-CTCGTATTGAAACTGCTGAA 1019
||||||||||||||| ||||||||||||||||||||| | || |||||||||||||| ||
Sbjct 1215 GCCTTAGTTACTGCCTTGGAAAACCACGCAGCAGAAGCACCT-GTATTGAAACTGCTAAA 1273
Query 1020 GGAAGCAGCTTCAGAAAACCTGATAAGCTCTAGTCAAATGGTGAAGGGGTTTTCAAGGTT 1079
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1274 TGAAGCAGCTTCAGAAAACCTGATAAGCTCTAGTCAAATGGTGAAGGGATTTTCAAGATT 1333
Query 1080 AAGAGAAAGCCTTGATGATCTTGCTCTTGACATTCCTTCAGCTAGAACCAAATTTGATTT 1139
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1334 AAGAGAAAGCCTTGATGATCTTGCTCTTGACATTCCTTCAGCTAGAACCAAATTTGGTTT 1393
Query 1140 GATTGTGCCAAAAGCTGTCTCAGGTGGTTGGCTTGATGCTTCGTTTGGTTATCCCTCTGG 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1394 GATTGTGCCAAAAGCTGTCTCAGGTGGTTGGCTTGATGCTTCGTTTGGTTATCCCTCTGG 1453
Query 1200 TGAATGTGGACGACAGCAGATCGAGGATGAGAAACTAAAGCGGTTTAAGGAAGACATTGT 1259
||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 1454 TGAATGTGGACGACAACAGAACGAGGATGAGAAACTAAAGCGGTTCAAGGAAGACATTGT 1513
Query 1260 GACCATCATTCATGAGTATTTCAATTCCGATGACATACCAGAACTCATACGCAGTCTTGA 1319
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1514 GACCATCATTCATGAGTATTTCAACTCTGATGACATACCAGAACTCATACGCAGTCTTGA 1573
Query 1320 GGATTTAGGAGCACCCGAGTACAACCCAATTTTTCTAAAGAAGCTGATAACACTTGCTCT 1379
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1574 GGATTTAGGAGCACCCGAGTACAACCCAATTTTTCTAAAGAAGCTGATAACACTTGCTTT 1633
Query 1380 GGACAGGAAGAATCACGAGAAAGAAATGGCATCTGTTCTCCTCTCATCTCTTCACATCGA 1439
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1634 GGACAGGAAGAATCACGAGAAAGAAATGGCATCTGTTCTTCTCTCATCTCTTCACATCGA 1693
Query 1440 GATGTTCACCACAGAAGATGTTGCAGATGGTTTCGTCATGCTCCTGGAGTCTGCAGAAGA 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1694 GATGTTCACCACAGAAGATGTTGCAGATGGTTTCGTCATGCTCCTGGAGTCTGCAGAAGA 1753
Query 1500 TACAGCTCTTGACATTCTGGATGCTTCCAACGAACTTGCTCTGTTCTTAGCTAGAGCTGT 1559
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1754 TACAGCTCTTGACATTCTGGATGCGTCCAACGAACTTGCTCTGTTCTTAGCTAGAGCTGT 1813
Query 1560 GATCGACGATGTTTTAGCACCTTTTAACCTTGAAGAGATCAGTAGCAAACTGCGACCTAA 1619
|||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct 1814 GATCGATGATGTTTTAGCACCTTTTAACCTGGAAGAGATCAGTAGCAAACTACGCCCTAA 1873
Query 1620 CTCAAGCGGAACTGAAACCGTGAAGATGGCTAGGTCACTTATCTTTGCTCGACATGCAGG 1679
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1874 CTCAAGCGGAACTGAAACCGTGAAGATGGCTAGGTCACTCATCTTTGCTCGACATGCAGG 1933
Query 1680 AGAGAGGCTTTTACGATGCTGGGGAGGTGGGAGCGGTTGGGCAGTGGAAGATGCAAAAGA 1739
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1934 AGAGAGGCTTCTAAGATGCTGGGGAGGTGGGAGCGGTTGGGCAGTGGAAGATGCAAAGGA 1993
Query 1740 CAAGATATCGAATCTCCTGGAGGAATACGAAAGCTCAGGGCTGGTATCAGAAGCGTGCAA 1799
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1994 CAAGATATCAAATCTCCTGGAGGAATACGAAAGCTCAGGGCTGGTATCAGAAGCATGCAA 2053
Query 1800 ATGCATCCATGAGCTAGGCATGCCTTTCTTCAACCATGAGGTGGTGAAGAAAGCACTGGT 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2054 ATGCATCCATGAGCTAGGCATGCCTTTCTTCAACCATGAGGTGGTGAAGAAAGCACTGGT 2113
Query 1860 GATGGGTATGGAGAAGAAGAAGGACAAGATGATGCTGGATCTTCTGCAGGAGAGTTTCGG 1919
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2114 GATGGGTATGGAGAAGAAGAAGGACAAGATGATGCTGGATCTTCTGCAGGAGAGTTTCAG 2173
Query 1920 AGAAGGACTCATAACCACAAACCAGATGACCAAAGGGTTCACAAGAGTTAAAGACGGGCT 1979
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 2174 TGAAGGACTCATAACCACAAACCAGATGACCAAAGGGTTCACAAGAGTCAAAGACGGACT 2233
Query 1980 CGAAGATCTTGCTTTAGACATCCCAAACGCAAAGGAGAAATTCAAGGACTATGTGGAGCA 2039
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |
Sbjct 2234 TGAAGATCTTGCTTTAGACATCCCAAACGCAAAGGAGAAATTCAACGACTACGTGGAGTA 2293
Query 2040 TGGGAAGAAGAATGGTTGG 2058
|||||||||||||||||||
Sbjct 2294 TGGGAAGAAGAATGGTTGG 2312
> AT4G24805.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr4:12785288-12786249
FORWARD LENGTH=962
Length=962
Score = 1158 bits (627), Expect = 0.0
Identities = 726/773 (94%), Gaps = 9/773 (1%)
Strand=Plus/Plus
Query 2064 ACAAGAAAGCGAAGTCTCGAAGCTAAAAATGAAATTCGTAATACCAAAACTACCCTTCAC 2123
||||| ||| |||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1 ACAAGGAAGGGAAGTCTCGAAGCT-AACATGAAATTCGTAATACCAAAACTACCCTTCAC 59
Query 2124 ActctctctcttcgtctccctctctcttctcatcatcttcctcttcGCCTTCCCCACCAC 2183
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 60 ACTCTCTCTCTTCCTCTCCCTCTCTTTTCTCATCATCTTCCTCTTCGCCTTCCCCACCAC 119
Query 2184 ATTCCTCCGCCGT-C-CTCT-CT-C-C-TCCTCCGTCATCGCCGTTGCCGACGAAGGGAT 2237
||||||||||||| | |||| || | | |||||||||| | |||||||||||||||| ||
Sbjct 120 ATTCCTCCGCCGTCCTCTCTCCTCCTCTTCCTCCGTCACCTCCGTTGCCGACGAAGGAAT 179
Query 2238 ACGGATCCGTCATCATGGATACTCCTCTTACGAAGCCTACATCAAACACCAGCTCAACAA 2297
|||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 180 ACGGATCCGTCACCATGGATACTCCTCCTACGAAGCATACATCAAACACCAGCTCAACAA 239
Query 2298 AACTCAAAACCCGAAGCTACGTAAGGTATGGACCACGCGCGACTGGGACAGGAAAGTGCG 2357
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 240 AACTCAGAACCCGAAGCTACGTAAGGTATGGACAACGCGCGACTGGGACAGGAAAGTTCG 299
Query 2358 CGTGTTCTCCACTTTCTTCCGACGTCTCAGCGATCGCGGTCTCCTCTCAAATCAATCAAA 2417
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 300 TGTGTTCTCCACTTTCTTCCGACGTCTCAGCGATCGCGGTCTTCTCTCAAATCAATCAAA 359
Query 2418 AGCTCTCTCGATCGGCGCGCGAGTAGGCCAGGAAGTGGCGGCGTTGAGATTGATCGGCGT 2477
||||||||||||||| || || || || || || || |||||||||||||||||||||||
Sbjct 360 AGCTCTCTCGATCGGTGCTCGGGTTGGACAAGAGGTTGCGGCGTTGAGATTGATCGGCGT 419
Query 2478 GGAAGACTCCGTCGGGATAGATCTGGTGCCGCGTCCGCCTCTGGTGGTGAAAGGTGACTT 2537
||||||||||||||| ||||||||||| ||||| || ||||| |||||||||||||||||
Sbjct 420 GGAAGACTCCGTCGGAATAGATCTGGTTCCGCGACCACCTCTCGTGGTGAAAGGTGACTT 479
Query 2538 CCACGCGCAGCCGTTCGACGAAGAGACGTTCGATTTCGAATTCTCAAACGTGTTCGATCA 2597
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 480 CCACGCGCAGCCGTTCGACGAAGAGACATTCGATTTCGAATTCTCAAACGTGTTCGATCA 539
Query 2598 CGCGCTTTACCCGGAAAAGTTCGTTGGGGAGATCGAACGGACGTTAAAGCCCGGAGGGGT 2657
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 540 CGCGCTTTACCCGGAGAAGTTCGTTGGGGAGATCGAACGGACTTTAAAGCCCGGAGGGGT 599
Query 2658 GTGTGTGTTACACGTGTCGATATCTGGGAAGACGGATAAGTACTCGGCTAACGATTTGTT 2717
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 600 GTGTGTGTTACACGTGTCGATATCTGGGAAGACGGATAAGTACTCGGCTAACGATTTGCT 659
Query 2718 TAGTGTGAAACCATTGGTGAA-TCTGTTTAAGAGATCAAAGGTCGTGGAGGTGAGGAAGA 2776
||||||||||||||||||||| | ||||||||||||| ||||| |||||| |||||||||
Sbjct 660 TAGTGTGAAACCATTGGTGAAAT-TGTTTAAGAGATCCAAGGTTGTGGAGATGAGGAAGA 718
Query 2777 TCGATGGGTTTGGGCTTGATACTGAGATTGTTTTTAGAAAGAACATCAACTAA 2829
||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 719 TCGATGGGTTTGGGCTTGACACTGAGATTGTTTTTAGAAAGAACATGAACTAA 771
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 140567774286
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5