BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg329316
Length=666
Score E
Sequences producing significant alignments: (Bits) Value
AT4G23170.1 | Symbols: EP1, CRK9 | receptor-like protein kinase... 505 3e-142
AT4G23150.1 | Symbols: CRK7 | cysteine-rich RLK (RECEPTOR-like ... 470 9e-132
AT4G23160.1 | Symbols: CRK8 | cysteine-rich RLK (RECEPTOR-like ... 460 6e-129
AT4G23140.2 | Symbols: CRK6 | cysteine-rich RLK (RECEPTOR-like ... 361 6e-99
AT4G23280.1 | Symbols: CRK20 | cysteine-rich RLK (RECEPTOR-like... 346 2e-94
AT4G23230.1 | Symbols: CRK15 | cysteine-rich RLK (RECEPTOR-like... 270 1e-71
AT3G45860.1 | Symbols: CRK4 | cysteine-rich RLK (RECEPTOR-like ... 206 3e-52
> AT4G23170.1 | Symbols: EP1, CRK9 | receptor-like protein kinase-related
family protein | chr4:12135093-12136157 FORWARD LENGTH=1065
Length=1065
Score = 505 bits (273), Expect = 3e-142
Identities = 316/337 (94%), Gaps = 2/337 (1%)
Strand=Plus/Plus
Query 303 TAACACCAATAATATTTCTCCTATTCAAAAACAAATAAACCAGTTTATAATTTTGGTGTT 362
||||||||| | ||||||||||| ||||| |||||||||||||||||| ||||||||
Sbjct 547 TAACACCAACACTATTTCTCCTAATCAAAGTCAAATAAACCAGTTTATAGTTTTGGTGCA 606
Query 363 ATCTAATATGAACCAAGCTGCCATGGAAGCAGCCAAAAGTTCTAGAAAATTCTCTACGAT 422
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 607 ATCTAATATGAACCAAGCTGCCATGGAAGCAGCCAACAGTTCTAGAAAATTCTCTACGAT 666
Query 423 AACGACCGAATTGACCGCACTCCAGACTTTGTACGGGCTTGTTCAATGCACTCCTGATCT 482
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAAGACCGAATTGACCGAACTCCAGACTTTGTACGGGCTTGTTCAATGCACTCCTGATCT 726
Query 483 TACAAGACAAGACTGCATGAGATGTCTGACAAGCTCCATCAATAGAATGCCACTTTCTAG 542
|||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 727 TACAAGTCAAGACTGTTTGAGATGTCTGACAAGATCCATCAATAGAATGCCACTTTCTAG 786
Query 543 AATTGGAGCAAGACAGTTTTGGCCAAGTTGTAATTCAAGGTACGAGCTTTACGCGTTCTA 602
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 787 AATTGGAGCAAGACAGTTTTGGCCAAGTTGTAATTCAAGGTACGAGCTTTACTCGTTCTA 846
Query 603 CAACGAAACCGCCATTGAGA-CACCATCACCACCACC 638
||||||||| |||||| || ||||||| ||||||||
Sbjct 847 CAACGAAACTACCATTG-GAACACCATCTCCACCACC 882
Score = 364 bits (197), Expect = 5e-100
Identities = 273/308 (89%), Gaps = 11/308 (4%)
Strand=Plus/Plus
Query 1 ATGTCTTCTCTTATATCTTTCATCTTCCTCTTCCTTTTCTCCTTCCTCACTAGCTTCAAA 60
||||||||||| || ||||| |||||||| ||||||||||| ||||||||||||||||||
Sbjct 113 ATGTCTTCTCTGATCTCTTTTATCTTCCTTTTCCTTTTCTCATTCCTCACTAGCTTCAAA 172
Query 61 GCTTCTGCTCAAGATCATTATTT-CCTATATCATAATTGTCCAAATACGACAACTTACTC 119
||||| |||||||||| || ||| | || ||||| |||||||||||||||||||||||||
Sbjct 173 GCTTCCGCTCAAGATCCTT-TTTACTTAAATCATTATTGTCCAAATACGACAACTTACTC 231
Query 120 AAG-TAACAGCACTTACTTCACCAATCTCAAAACTCTTTTGTCCTCTCTCT-CTTTCCC- 176
||| | ||||||||||| ||||||||||| ||| |||||||||||| | | ||| |||
Sbjct 232 AAGATT-CAGCACTTACTCCACCAATCTCAGAACCCTTTTGTCCTCTTT-TGCTT-CCCG 288
Query 177 CAACGCCTCTTA-TCCCACCGGATTCCAAAACGCCACGGTGGGACAAACCCCTGACAGGG 235
|||||||||||| ||| ||||||||||| |||| |||||||||||||||||| ||| ||
Sbjct 289 CAACGCCTCTTACTCC-ACCGGATTCCAGAACGTCACGGTGGGACAAACCCCCGACCTGG 347
Query 236 TCACCGGACTTTTCCTTTGCCGCGGAGACCTCT-GCCCGAAGTTTGCCGTAACTGCGTCG 294
|||||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||| |
Sbjct 348 TCACCGGACTTTTCCTCTGCCGCGGAGACCTCTCGCCGGAAGTTTGCAGTAACTGCGTTG 407
Query 295 CCTTCTCC 302
||||||||
Sbjct 408 CCTTCTCC 415
> AT4G23150.1 | Symbols: CRK7 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 7 | chr4:12125731-12128332 FORWARD LENGTH=2011
Length=2011
Score = 470 bits (254), Expect = 9e-132
Identities = 318/347 (92%), Gaps = 11/347 (3%)
Strand=Plus/Plus
Query 304 AACACCAATAATATTTCTCCTATTCAAAAACAAATAAACCAGTTTA-TAATTTTGGTGTT 362
||| ||||| ||||||||||||||||||| |||||||||||||||| ||| |||||||||
Sbjct 436 AACCCCAATCATATTTCTCCTATTCAAAATCAAATAAACCAGTTTACTAA-TTTGGTGTT 494
Query 363 ATCTAATATGAACCAAGCTGCCATGGAAGCAGCC-AAAAGTTCTAGAAAATTCTCTACGA 421
|||||||||||||||| |||||| ||||||||| | || | ||||||||||||||||||
Sbjct 495 ATCTAATATGAACCAAATTGCCATCGAAGCAGCCGACAA-TCCTAGAAAATTCTCTACGA 553
Query 422 TAACGACCGAATTGACCGCACTCCAGACTTTGTACGGGCTTGTTCAATGCACTCCTGATC 481
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 554 TAAAGACCGAATTGACCGCACTCCAGACTTTCTACGGGCTTGTTCAATGCACTCCTGATC 613
Query 482 TTACAAGACAAGACTGCATGAGA-TGTCTGACAAGCTCCATCAATAGAATGCCACTTTCT 540
|| |||||||| ||||||||| | ||||||||||| |||||||||||||||||| |||||
Sbjct 614 TTTCAAGACAAAACTGCATGA-ACTGTCTGACAAGTTCCATCAATAGAATGCCATTTTCT 672
Query 541 AGAATTGGAGCAAGACAGTTTTGGCCAAGTTGTAATTCAAGGTACGAGCTTTACGCGTTC 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 673 AGAATTGGAGCAAGACAGTTTTGGCCAAGTTGTAATTCAAGGTACGAGCTTTACGATTTC 732
Query 601 TACAACGAAACCGCCATTGAG-ACACCATCACCACCACCGCCGCCTC 646
||||||||||||||||||| | |||||| | | ||| |||| |||||
Sbjct 733 TACAACGAAACCGCCATTG-GTACACCA-C-C-ACCGCCGCTGCCTC 775
Score = 374 bits (202), Expect = 8e-103
Identities = 271/303 (89%), Gaps = 9/303 (3%)
Strand=Plus/Plus
Query 1 ATGTCTTCTCT-TATATCTTTCATCTTCCTCTTCCTTTTCTCCTTCCTCACTAGCTTCAA 59
||||||||||| | | ||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct 1 ATGTCTTCTCTCT-TCCCTTTCATATTCCTTTTCCTTTTCTCATTCCTCACTAGCTTCAG 59
Query 60 AGCTTCTGCTCAAGATCATTATTTCCTATATC-ATAATTGTCCAAATACGACAACTTACT 118
||||||||||||||||| | ||||||| | || ||||||||||| | ||||||||||
Sbjct 60 AGCTTCTGCTCAAGATCCTCGTTTCCTA-GCCTATTATTGTCCAAATGCAACAACTTACT 118
Query 119 CAAGTAACAGCACTTACTTCACCAATCTCAAAACTCTTTTGTCCTCTCTCTCTTTCCC-C 177
||||||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||| |
Sbjct 119 CAAGTAACAGCACTTACTTGACCAATCTTAAAACCCTTTTGTCCTCTCTCTC-TTCCCGC 177
Query 178 AACGCCTCTTATC-CCACCGGATTCCAAAACGCCACGGTGGGACAAACCCCTGACAGGGT 236
||||||||||| | |||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct 178 AACGCCTCTTA-CTCCACCGGATTCCAAAACGCCACGGTGGGACAAGCCCTTGACAGGGT 236
Query 237 CACCGGACTTTTCCTTTGCCGCGGAGACCTCT-GCCCGAAGTTTGCCGTAACTGCGTCGC 295
||||||||||||||||||||| |||||| ||| ||| ||||||||||||||||||||| |
Sbjct 237 CACCGGACTTTTCCTTTGCCGGGGAGACGTCTCGCCGGAAGTTTGCCGTAACTGCGTCAC 296
Query 296 CTT 298
|||
Sbjct 297 CTT 299
> AT4G23160.1 | Symbols: CRK8 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 8 | chr4:12129485-12134187 FORWARD LENGTH=3890
Length=3890
Score = 460 bits (249), Expect = 6e-129
Identities = 313/342 (92%), Gaps = 11/342 (3%)
Strand=Plus/Plus
Query 304 AACACCAATAATATTTCTCCTATTCAAAAACAAATAAACCAGTTTATA-ATTTTGGTGT- 361
||| |||||||||||||| |||||||||| |||| | ||||||||||| | |||||| |
Sbjct 2224 AACCCCAATAATATTTCTTCTATTCAAAATCAAAGAGACCAGTTTATAGA-TTTGGT-TC 2281
Query 362 TATCTAATATGAACCAAGCTGCC-ATGGAAGCAGCCAAAAGTTCTAGAAAATTCTCTACG 420
|||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct 2282 AATCTAATATGAACCAAGCTGCCAAT-GAAGCAGCCAACAGTTCTAGAAAATTCTCTACG 2340
Query 421 ATAACGACCGAATTGACCGCACTCCAGACTTTGTACGGGCTTGTTCAATGCACTCCTGAT 480
|||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 2341 ATAAAGACCGAATTGACCTCACTCCAGACTTTGTATGGGCTTGTTCAATGCACTCCTGAT 2400
Query 481 CTTACAAGACAAGACTGCATGAGATGTCTGACAAGCTCCATCAATAG-A--ATGCCACTT 537
|| |||||||||| ||| | || ||||||||||| ||||||||||| | |||||||||
Sbjct 2401 CTCGCAAGACAAGATTGCTTTAGCTGTCTGACAAGTTCCATCAATAGAATGATGCCACTT 2460
Query 538 TCTAGAATTGGAGCAAGACAGTTTTGGCCAAGTTGTAATTCAAGGTACGAGCTTTACGCG 597
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2461 TTTAGAATTGGAGCAAGACAGTTTTGGCCAAGTTGTAATTCAAGGTACGAGCTTTACGCG 2520
Query 598 TTCTACAACGAAACCGCCATTGAGA-CACCATCACCACCACC 638
|||||||||||||||||||||| || ||||||||||||||||
Sbjct 2521 TTCTACAACGAAACCGCCATTG-GAACACCATCACCACCACC 2561
Score = 363 bits (196), Expect = 2e-99
Identities = 267/300 (89%), Gaps = 9/300 (3%)
Strand=Plus/Plus
Query 8 CTCTTATATCTTTCATCTTCCTCTTCCTTTTCTCCTTCCTCACTAGCTTCAAAGCTTCTG 67
|||| || | |||||| ||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 1799 CTCTGATCTGTTTCATTTTCCTTTTCCTTTTCTCATTCCTCACTAGCTTCAAAGCTTCTG 1858
Query 68 CTCAAGATCATTATTT-CCTATATCATAATTGTCCAAATACGACAACTTACTCAAGTAAC 126
||||| ||| || ||| |||| ||||| |||||||||||| |||||||||||||||||||
Sbjct 1859 CTCAAAATCCTT-TTTACCTAAATCATGATTGTCCAAATAGGACAACTTACTCAAGTAAC 1917
Query 127 AGCACTTACTTCACCAATCTCAAAACTCTTTTGTCCTCTCTCT-CTTTCCC-CAACGCCT 184
|||||||||| ||||||||||||||| |||||||||||| | | ||| ||| ||||||||
Sbjct 1918 AGCACTTACTCCACCAATCTCAAAACCCTTTTGTCCTCTTT-TGCTT-CCCGCAACGCCT 1975
Query 185 CTTA-TCCCACCGGATTCCAAAACGCCACGGTGGGACAAACCCCTGACAGGGTCACCGGA 243
|||| ||| ||||||||||||||| || || |||||||||||| |||||||||||||||
Sbjct 1976 CTTACTCC-ACCGGATTCCAAAACATCAGGGCGGGACAAACCCCCGACAGGGTCACCGGA 2034
Query 244 CTTTTCCTTTGCCGCGGAGACCTCTGCCCG-AAGTTTGCCGTAACTGCGTCGCCTTCTCC 302
||||||||||| ||||||||||| | |||| |||||||| |||||||||| |||||||||
Sbjct 2035 CTTTTCCTTTGTCGCGGAGACCTATCCCCGGAAGTTTGCAGTAACTGCGTTGCCTTCTCC 2094
> AT4G23140.2 | Symbols: CRK6 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 6 | chr4:12121383-12124205 FORWARD LENGTH=2225
Length=2225
Score = 361 bits (195), Expect = 6e-99
Identities = 272/307 (89%), Gaps = 14/307 (5%)
Strand=Plus/Plus
Query 1 ATGTCTTCTCTTATATCTTTCATCTTCCTCTTCCTTTTCTCCTTCCTCACTAG---CTTC 57
|||||||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||
Sbjct 15 ATGTCTTCTCTTATATCTTTCAACTTCCTTTTCCTTTTCTCATTCCTCACTAGCTCCTTC 74
Query 58 AAAGCTTCTGCTCAAGATCATTATTT-CCTATATCATAATTGTCCAAATACGACAACTTA 116
| ||||||||||||||||| || ||| | || ||||| ||||||||||||||||||||||
Sbjct 75 ACAGCTTCTGCTCAAGATCCTT-TTTACTTAAATCATTATTGTCCAAATACGACAACTTA 133
Query 117 CTCAAGTAACAGCACTTACTTCACCAATCTCAAAACTCTTTTGTCCTCTCTCTCTTTCCC 176
|||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||| | |
Sbjct 134 CTCAAGTAACAGCACTTACTCCACCAATCTCAGAACCCTTTTGTCCTCTCTATCTT-CAC 192
Query 177 C-AACGCCTCTTA-TCCCACCGGATTCCAAAACGCCACGGTGGGACAAA-CCCCTGACAG 233
||||||||||| ||| |||||||||||||||||||| | ||| ||| |||| |||||
Sbjct 193 GTAACGCCTCTTACTCC-ACCGGATTCCAAAACGCCACTGCAGGA-AAAGCCCCCGACAG 250
Query 234 GGTCACCGGACTTTTCCTTTGCCGCGGAGACCTCTGC-CCG-AAGTTTGCCGTAACTGCG 291
|||||||||||||||||||||||||||||| ||| | ||| ||||||||||||||||||
Sbjct 251 AGTCACCGGACTTTTCCTTTGCCGCGGAGACGTCT-CACCGGAAGTTTGCCGTAACTGCG 309
Query 292 TCGCCTT 298
| |||||
Sbjct 310 TAGCCTT 316
> AT4G23280.1 | Symbols: CRK20 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 20 | chr4:12174740-12177471 FORWARD LENGTH=1971
Length=1971
Score = 346 bits (187), Expect = 2e-94
Identities = 267/304 (88%), Gaps = 11/304 (4%)
Strand=Plus/Plus
Query 1 ATGTCTTCTCTTATATCTTTCATCTTCCTCTTCCTTTTCTCCTTCCTCACTAGCTTCAAA 60
||||||||||| || | |||||| ||||| ||||||||||| ||| |||||||||||| |
Sbjct 1 ATGTCTTCTCTGATCTGTTTCATTTTCCTTTTCCTTTTCTCATTCATCACTAGCTTCACA 60
Query 61 GCTTCTGCTCAAGATCATTATTT-CCTATATCATAATTGTCCAAAT-ACGACAACTTACT 118
|||||||||||| ||| || ||| |||||||||||||||| | || |||||||||||||
Sbjct 61 GCTTCTGCTCAAAATCCTT-TTTACCTATATCATAATTGTTC-TATCACGACAACTTACT 118
Query 119 CAAGTAACAGCACTTACTTCACCAATCTCAAAACTCTTTTGTCCTCTCTCTCTT-TCCCC 177
|||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||
Sbjct 119 CAAGTAACAGCACTTACTCCACCAATCTCAAAACCCTTTTGTCCTCTCTCTCTTCTCGT- 177
Query 178 AACGCCTCTTA-TCCCACCGGATTCCAAAACGCCACGGTGGGACAAACCCCTGACAGGGT 236
||||||||||| ||| |||||||||||||||||||| | ||||||| |||| |||| |||
Sbjct 178 AACGCCTCTTACTCC-ACCGGATTCCAAAACGCCACTGCGGGACAAGCCCCCGACATGGT 236
Query 237 CACCGGACTTTTCCTTTGCCGCGGAGACCTCTGC-CC-GAAGTTTGCCGTAACTGCGTCG 294
||||||||||||||| ||||||||| || ||| | || ||||||||||||| |||| |||
Sbjct 237 CACCGGACTTTTCCTCTGCCGCGGAAACGTCT-CACCTGAAGTTTGCCGTAGCTGCATCG 295
Query 295 CCTT 298
||||
Sbjct 296 CCTT 299
> AT4G23230.1 | Symbols: CRK15 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 15 | chr4:12157569-12160270 REVERSE LENGTH=2133
Length=2133
Score = 270 bits (146), Expect = 1e-71
Identities = 241/285 (85%), Gaps = 13/285 (5%)
Strand=Plus/Plus
Query 25 TTCCTCTTCCTTTTCTCCTTCCTCACTAGCTTCAAAGCTTCTGCTCAAGATCATTATTTC 84
||| |||||||||||| ||||||||||||||||| |||||||| | || | | | |||
Sbjct 10 TTCATCTTCCTTTTCTTCTTCCTCACTAGCTTCACAGCTTCTGTTGAA-A--A-TGTTTT 65
Query 85 CTATAT----CATAATTGTCCAAATACGACAACTTACTCAAGTAACAGCACTTACTTCAC 140
|||||| |||| ||| ||||||||||||||||| ||||| |||||| ||||||| ||
Sbjct 66 CTATATAAAGCATATTTGCCCAAATACGACAACTTATTCAAGAAACAGCCCTTACTTGAC 125
Query 141 CAATCTCAAAACTCTTTTGTCCTCTCTCTCTTTCCCCAACGCCTCTTATC-CCACCGGAT 199
||||||| ||| |||||||| ||||| ||| ||||||||||||||| | | || ||||
Sbjct 126 TAATCTCAGAACCCTTTTGTCTTCTCTTTCTGCCCCCAACGCCTCTTA-CTCTACTGGAT 184
Query 200 TCCAAAACGCCACGGTGGGACAAACCCCTGACAGGGTCACCGGACTTTTCCTTTGCCGCG 259
|||||| ||||| || ||||||| ||||||| || |||||||||||||||||||||||||
Sbjct 185 TCCAAAGCGCCAGGGCGGGACAAGCCCCTGATAGAGTCACCGGACTTTTCCTTTGCCGCG 244
Query 260 GAGACCTCTGC-CCGA-AGTTTGCCGTAACTGCGTCGCCTTCTCC 302
||||| ||| | ||| |||||| |||||||||||||||||||||
Sbjct 245 GAGACGTCT-CACCGGCAGTTTGTCGTAACTGCGTCGCCTTCTCC 288
Score = 217 bits (117), Expect = 1e-55
Identities = 259/325 (80%), Gaps = 19/325 (6%)
Strand=Plus/Plus
Query 327 TCAAAAACAAATAAACCAGTTTATA-ATTTTGGTGTTATCTAATATGAACCAAGCTGCCA 385
|||||| ||||| |||| ||| | | ||||| |||| |||| ||||| |||||||||
Sbjct 438 TCAAAATCAAATGAACCGGTTCAAAGATTTT-GTGTCGTCTACGATGAATCAAGCTGCCG 496
Query 386 TGGAAGCAGCCAAAAGTTCTAGAAAATTCTCTACGATAACGACCGAATT-GACCGCACTC 444
| |||| || | ||| ||||||| |||| |||| ||| | || | || ||| ||||||
Sbjct 497 TCAAAGCGGCGAGCAGTCCTAGAAAGTTCTATACGGTAAAGGCC-ACTTGGACAGCACTC 555
Query 445 CAGACTTTGTACGGGCTTGTTCAATGCACTCCTGATCTTACAAGACAAGACTGCATGAGA 504
||||| |||||||| || ||||| |||||||||||||||||||||||||||||| | ||
Sbjct 556 CAGACGTTGTACGGCCTGGTTCAGTGCACTCCTGATCTTACAAGACAAGACTGCTTCAGC 615
Query 505 TGTCTG-ACAAGCTCCATCAA-TAGAATGCCACTTT-CTAGAATTGGAGCAAGACAGT-T 560
|||||| | ||| |||||||| | |||||| |||| | | || ||||| |||| | | |
Sbjct 616 TGTCTGGA-AAGTTCCATCAAATT-AATGCCTCTTTACAA-AACTGGAGGAAGA-ACTCT 671
Query 561 TTGGC-CAAGTTGTAATTCAAGGTACGAGCTTTACGCGTTCTACAACGAAACCGCCATTG 619
|| | | ||||||||||||||||||||||||| |||||||||||||||||| | ||
Sbjct 672 TTA-CTCTAGTTGTAATTCAAGGTACGAGCTTTTCGCGTTCTACAACGAAACTACTGTT- 729
Query 620 AGA-CAC--CAT-CACCACCACCGC 640
||| ||| || ||||||||||||
Sbjct 730 AGAACACAACAAGCACCACCACCGC 754
> AT3G45860.1 | Symbols: CRK4 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 4 | chr3:16863401-16866041 REVERSE LENGTH=2031
Length=2031
Score = 206 bits (111), Expect = 3e-52
Identities = 171/198 (86%), Gaps = 11/198 (6%)
Strand=Plus/Plus
Query 111 AACTTACTCAAGTAACAGCACTTACTTCACCAATCTCAAAACTCTTTTGTCCTCTCTCTC 170
||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 123 AACGTATTCAAGAAACAGCACTTACTTCACCAATCTCAAAACACTTTTGTCCTCTCTCTC 182
Query 171 TTTCCCC-AACGCCTCTTA-TCCCACCGGATTCCAAAAC-GCCACGGTGGGACAAAC-CC 226
|| ||| ||||| || || || ||||||||||||| | ||||||| ||||||| | ||
Sbjct 183 TT-CCCGGAACGCTTCATACTCT-ACCGGATTCCAAA-CTGCCACGGCGGGACAAGCTCC 239
Query 227 CTGACAGGGTCACCGGACTTTTCCTTTGCCGCGGAGACCTCTGCCC--GAAGTTTGCCGT 284
| ||| | |||||||||||||||||||| ||||||||| ||| | | ||||||||||||
Sbjct 240 C-GACCGTGTCACCGGACTTTTCCTTTGTCGCGGAGACGTCT-CACAAGAAGTTTGCCGT 297
Query 285 AACTGCGTCGCCTTCTCC 302
|||||||||||||| |||
Sbjct 298 AACTGCGTCGCCTTTTCC 315
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 32200088227
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5