BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg329351 Length=2559 Score E Sequences producing significant alignments: (Bits) Value AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 2457 0.0 AT4G22758.1 | Symbols: | unknown protein; LOCATED IN: chloropl... 1016 0.0 > AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:11960553-11962289 FORWARD LENGTH=1737 Length=1737 Score = 2457 bits (1330), Expect = 0.0 Identities = 1588/1710 (93%), Gaps = 27/1710 (2%) Strand=Plus/Plus Query 775 ATGTTGGATTCTAGGCTGAGATTCTTCCTTGAAAGATGTGTAGTGATTCAACAGGCGAAG 834 ||||||||||||| |||||||||||||||| |||||||||||||| || ||||||||||| Sbjct 1 ATGTTGGATTCTAAGCTGAGATTCTTCCTTCAAAGATGTGTAGTGCTTGAACAGGCGAAG 60 Query 835 CAAGTTCATGCACAGTTAGTAGTGAACCGTTATAACCATCTTGAACCCATCTTGGTTCAC 894 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 61 CAAGTTCATGCACAGTTAGTAGTGAACCGCTATAACCATCTTGAACCCATCTTGGTTCAC 120 Query 895 CAAACTCTTCACTTCACTAAAGAGTTCTCTAGAAATGTTGTCAA-CTATGTCAAAAGAAT 953 |||||||||||||||||||||||||||||||| ||| |||| || |||||| |||||||| Sbjct 121 CAAACTCTTCACTTCACTAAAGAGTTCTCTAGGAATATTGT-AACCTATGTTAAAAGAAT 179 Query 954 CCTCCACGGGTTTAAGAGTTCCAAAGGT-ATGGATTCTTTCTCTTGGGGATGTCTT-GTT 1011 |||| | |||||| | | | ||| || ||||||||||| ||||| ||| || ||| Sbjct 180 CCTCAAGGGGTTT-A-A--T-----GGTCAT-GATTCTTTCTCCTGGGGGTGT-TTAGTT 228 Query 1012 CGGTTCTTGAGTCAGCATAGGAAGTTTAAAGAAACGGTTGGCGTCTACATCGAAATGCAT 1071 |||||||| || |||||||||||||||||||||||||||| ||| || || || |||||| Sbjct 229 CGGTTCTTAAGCCAGCATAGGAAGTTTAAAGAAACGGTTGACGTGTATATTGATATGCAT 288 Query 1072 TATTCTGGGATTCCTCCTAGTTCACATGCTATAACCTCAGTGTTGAGAGCTTGTGGTAAG 1131 | |||||||||||||| |||||||||||| ||||||||||||| ||||| |||||||| Sbjct 289 AACTCTGGGATTCCTCCAAGTTCACATGCTGTAACCTCAGTGTTAAGAGCCTGTGGTAAA 348 Query 1132 ATGGAGGATATGGTTGATGGCAAACCGATTCATGCTCAGGCTCTTAAAAATGGATTGTGT 1191 |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 349 ATGGAGAATATGGTTGATGGTAAACCGATTCATGCTCAGGCTCTGAAAAATGGATTGTGT 408 Query 1192 GGTTGTGTTTATGTTCAGACAGGTCTGGTGGGTTTGTACTCTAGA-TTCGGTTACATTGA 1250 |||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||| Sbjct 409 GGTTGTGTTTATGTTCAGACAGGTCTGGTGGGTTTGTATTCTAGACTT-GGTTACATTGA 467 Query 1251 GATGGCAAAGAAGGTATTTGATGATATTGCAGAGAAGAACACAGTTTCGTGGAACTCGCT 1310 | |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 468 GCTGGCAAAGAAGGCGTTTGATGATATTGCTGAGAAGAACACAGTTTCGTGGAACTCGCT 527 Query 1311 TTTACACGGGTATCTGGAAAG-TGGGAATCTAGATGAAGCTCGCAGAGTCTTTGACAAGA 1369 |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||| Sbjct 528 ATTACACGGGTATCTGGAAAGCGGGGAA-CTAGATGAGGCTCGCAGAGTCTTTGACAAGA 586 Query 1370 TTCCAGAGAAAGATGTTGTGTCATGGAATCTGATTATCTCGAGCTATGCaaaaaaaGGTG 1429 | || |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 587 TCCCTGAGAAAGATGCTGTGTCATGGAATCTGATTATCTCGAGCTATGCAAAAAAAGGTG 646 Query 1430 ACATGAGCAATGCATGCTCTTTG-TTTCTGACGATGCCTTTGAAAAGCT-CTGCTACTTG 1487 ||||| ||||||||||||||||| |||| | | |||||||||||||| | | ||| |||| Sbjct 647 ACATGGGCAATGCATGCTCTTTGTTTTCAG-CAATGCCTTTGAAAAG-TCCGGCTTCTTG 704 Query 1488 GAATATTTTGATTGGCGGGTATGTGAATTGCAGGGAAATGAAACTAGCAAGAACCTATTT 1547 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 705 GAATATATTGATAGGCGGGTATGTGAATTGCAGGGAAATGAAACTAGCAAGAACCTACTT 764 Query 1548 CGATACAATGCCCCAGAAGAATAGTGTCTCTTGGATTACAATGATTTCAGGGTACACAAA 1607 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 765 CGATGCAATGCCCCAGAAGAATGGTGTCTCTTGGATTACAATGATTTCAGGGTACACAAA 824 Query 1608 ATTGGGAGATGTTCAGTCTGCTGAAAAGCTCTTCAGACAGATGTCTAAGAAAGACAAACT 1667 |||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| Sbjct 825 ATTGGGAGATGTTCAGTCTGCTGAGGAGCTCTTTAGACTGATGTCTAAGAAAGACAAACT 884 Query 1668 CGTCTATGATGCCATGATTGCTTGTTATGCTCAAAACGGCAAGCCAAAGGATGCTCTGAA 1727 |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct 885 CGTCTATGATGCCATGATAGCTTGTTATACTCAAAACGGCAAGCCAAAGGATGCTCTGAA 944 Query 1728 GCTATTCTCTCAGATGCTTGAAAGTAATTTAGATATTCAACCGGATGAGATCACACTCTC 1787 ||||||| |||||||||||||||| |||| | ||||||| |||||||||||||||||||| Sbjct 945 GCTATTCGCTCAGATGCTTGAAAGGAATTCATATATTCAGCCGGATGAGATCACACTCTC 1004 Query 1788 AAGTGTTGTATCAGCTAGTTCACAGTTGGGTGATACCAGTTTTGGTACATGGGTTGAGTC 1847 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 1005 AAGTGTTGTATCAGCTAATTCACAGTTGGGTAATACCAGTTTTGGTACATGGGTTGAGTC 1064 Query 1848 ATACATAACCGAACGTGGAATCATGATCGATGATCTTTTAAGTACCTCTCTAATCGATCT 1907 ||| |||||||||| |||||||| |||||||||||| ||||||||||||||||| ||||| Sbjct 1065 ATATATAACCGAACATGGAATCAAGATCGATGATCTCTTAAGTACCTCTCTAATTGATCT 1124 Query 1908 TTACATGAAAGGCGGAGACTTTGCCAAGGCATTCAAATTGTTCAACGATCTAATCAAAAA 1967 ||||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct 1125 TTACATGAAAGGCGGAGACTTTGCCAAGGCATTCAAAATGTTCAGCAATCTAAACAAAAA 1184 Query 1968 GGACACAGTTTCTTACTCTGCTATGATCATGGGCTGTGGGATAAACGGCATGGCCACAGA 2027 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1185 GGACACAGTTTCTTACTCTGCTATGATCATGGGCTGCGGGATAAACGGCATGGCCACAGA 1244 Query 2028 AGCAAACCGTTTGTTTAGAGAGATGATCGAAAAGAAGATCCCTCCAAATCTAGTAACATT 2087 ||||||| ||||||||| || ||||| ||||||||||||||||||||| |||||||||| Sbjct 1245 AGCAAACAGTTTGTTTACAGCTATGATTGAAAAGAAGATCCCTCCAAATGTAGTAACATT 1304 Query 2088 CACTGGACTATTATCAGCGTATAGCCATTCAGGTCTTGTTCAAGAAGGCTACAAATGCTT 2147 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1305 CACAGGACTATTATCAGCGTATAGCCATTCAGGTCTTGTTCAAGAAGGCTACAAATGCTT 1364 Query 2148 TAACTCCATGAAAGACCACAACCTAGAACCCTCCGCTGATCATTATGGGATAATGGTGGA 2207 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 1365 TAACTCCATGAAAGACCACAACTTGGAACCCTCCGCTGATCATTATGGGATAATGGTGGA 1424 Query 2208 TATGTTGGGACGAGCCGGGAGGCTAGTGGAGGCATATGAACTGATCAAGAGTATGCCGAT 2267 |||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct 1425 TATGTTGGGACGAGCCGGGAGGCTAGAAGAAGCATATGAGCTGATCAAGAGTATGCCGAT 1484 Query 2268 GCAGCCAAATGCTGGAGTTTGGGGAGCGTTGCTTTTAGCCAGTGGGTTACACAACAACGT 2327 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1485 GCAGCCAAATGCTGGAGTTTGGGGAGCTTTGCTTTTAGCCAGTGGGTTACACAACAACGT 1544 Query 2328 TGAATTTGGAGAGATTGCGTGCAGTCACTGCGTTAAACTGGAGACCGATCCTACGGGTTA 2387 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct 1545 TGAATTTGGAGAGATTGCGTGCAGTCACTGCGTTAAACTCGAGACAGATCCTACAGGTTA 1604 Query 2388 TCTTTCGCATCTTGCTAAT-ATATATAT-GTCTGTTGGTAGATGGGACGATGCAAGGAAT 2445 ||||||||||||||||| | |||||| | |||||||||||||||||||||||| |||| | Sbjct 1605 TCTTTCGCATCTTGCTA-TGATATAT-TCGTCTGTTGGTAGATGGGACGATGCCAGGACT 1662 Query 2446 GTTAGAGATAGTATGGAAGAGAAGAAACTG 2475 |||||||| ||||| |||||||||||||| Sbjct 1663 GTTAGAGACAGTATAAAAGAGAAGAAACTG 1692 > AT4G22758.1 | Symbols: | unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). | chr4:11958310-11960036 FORWARD LENGTH=1067 Length=1067 Score = 1016 bits (550), Expect = 0.0 Identities = 689/756 (91%), Gaps = 9/756 (1%) Strand=Plus/Plus Query 1 ATGTCAGATTCAATTCACCGGAGAAAAGTTCCGACTCCGGTCGGAAATGGAGGTCGGAGC 60 ||||| ||||| |||||||||||||||||| ||| ||| || |||||||||||||||||| Sbjct 168 ATGTCTGATTCGATTCACCGGAGAAAAGTTTCGAATCCTGTAGGAAATGGAGGTCGGAGC 227 Query 61 TCCAGGACGAGACGAACAGCTTTCCGATATGTTTCCGACAAGAATAGTCTCTCTAAATCG 120 ||||| || ||||||||||||||| ||||||||||||||||||||| || |||||||||| Sbjct 228 TCCAGAACAAGACGAACAGCTTTCAGATATGTTTCCGACAAGAATAATCGCTCTAAATCG 287 Query 121 AGTAATAAGGTTTTTGA-ACGAAGCTTCTCAGAACCGAGTCTAAATCGTCGCCGCGATGG 179 |||||||||||||| || | ||||||||||||| |||||||| ||||| | |||||| || Sbjct 288 AGTAATAAGGTTTTCGAGA-GAAGCTTCTCAGAGCCGAGTCTTAATCGCCACCGCGACGG 346 Query 180 AGACAGTAATCACTTGCGACGACCATCGCCGATGAGAGGTTTACC-ATTG--GAAGAATC 236 | | |||||||||||||| |||||||||||||||||||||||||| || | |||||| | Sbjct 347 ACAGAGTAATCACTTGCGGCGACCATCGCCGATGAGAGGTTTACCGATGGAAGAAGAAAC 406 Query 237 CGAACCGATCGTTTACTTGCC-ACGGATTCGCTCTGAGGTTTTCGCTTCTTCTCCGTCGT 295 ||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||| Sbjct 407 AAAACCGATCGTTTACTTGCCTA-GGATTCGCTCTGAGGTTTTCGCTTCGTCTCCGTCGT 465 Query 296 TGTTGAACTTCTCTTCGCCGTCGTCTTTATCTCCGATCAATCAAGAGGGTAATACAAAAG 355 |||||||||| | |||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 466 TGTTGAACTTATATTCGCCCTCGTCTTCATCTCCGATCAATCAAGAGGGTAATACAAAAG 525 Query 356 AAGCACCAAAAGTAGTAATCAGTGTAGCAGTAGAAGGAAGTCCTGGACCTGTAAGAGCAA 415 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct 526 AAGCACCAAAAGTAATAATCAGTGTAGCAGTAGAAGGAAGTCCTGGACCGGTAAGAGCAA 585 Query 416 TGGTTAAATTGAGTTGCAACGTCGAGGAAACGATCAAAATTGTCGTGGACAAATACTGCA 475 |||||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||| | Sbjct 586 TGGTTAAACTGAGTTGCAACGTCGAAGAAACGATCAAAATTGTCGTTGACAAGTACTGTA 645 Query 476 AAGAAGGACGAACTCCAAAACTCGATCGAGATTCTGCTTTTGAATTGCATCAGTCACATT 535 |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 646 AAGAAGGAAGAACTCCAAAACTCGATCGAGATTCTGCCTTTGAATTGCATCAGTCACATT 705 Query 536 TTAGCATTCAGTGTTTGGAGAAAAGAGAAATAATAGGAGAAATAGGAAGTAGAAGCTTCT 595 | ||||| |||||||||||||||||||||||||| |||||| |||| ||||||||||||| Sbjct 706 TCAGCATCCAGTGTTTGGAGAAAAGAGAAATAATTGGAGAATTAGGCAGTAGAAGCTTCT 765 Query 596 ACATGAGAAAGAAAGCTCATGAAACCGAAGGTTCGTTTGTCGGGACTACTCCGGTGAGAA 655 |||||||||||||||||| |||||||| ||||||||| | ||||| | |||| | ||||| Sbjct 766 ACATGAGAAAGAAAGCTCCTGAAACCGGAGGTTCGTTCGCCGGGATTTCTCCAGCGAGAA 825 Query 656 CTACCCTAATTTCGTCGTCGAATTTGATCGGATCGTACATTGCTCAGTTAATAGGGAAAA 715 | | ||||||| |||||||||||||||||||||||| ||| |||||||| || ||||||| Sbjct 826 CGAGCCTAATTCCGTCGTCGAATTTGATCGGATCGTGCATCGCTCAGTTGATTGGGAAAA 885 Query 716 TCATGAGGAGAACAAGACAG-ATATGGAACATATTG 750 ||||||||||||||||| || ||||||||||||||| Sbjct 886 TCATGAGGAGAACAAGA-AGGATATGGAACATATTG 920 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 127022699676 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5