BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg329352
Length=2334
Score E
Sequences producing significant alignments: (Bits) Value
AT4G22756.1 | Symbols: SMO1-2, ATSMO1, ATSMO1-2, SMO1 | sterol ... 1273 0.0
AT4G22753.1 | Symbols: SMO1-3, ATSMO1, SMO1, ATSMO1-3 | sterol ... 896 0.0
AT4G12110.1 | Symbols: SMO1-1, ATSMO1, ATSMO1-1 | sterol-4alpha... 808 0.0
AT4G22750.2 | Symbols: | DHHC-type zinc finger family protein ... 433 4e-120
> AT4G22756.1 | Symbols: SMO1-2, ATSMO1, ATSMO1-2, SMO1 | sterol
C4-methyl oxidase 1-2 | chr4:11954840-11956813 REVERSE LENGTH=1302
Length=1302
Score = 1273 bits (689), Expect = 0.0
Identities = 795/846 (94%), Gaps = 8/846 (1%)
Strand=Plus/Plus
Query 1 ATGATCCCTTACGCCACAGTCGAAGACGCATCCATAGCGTTAGGC-CGAAACCTCACAAC 59
|||||||| ||||| ||| ||||||| || || || || ||| | ||||||||||||
Sbjct 119 ATGATCCCATACGCAACAATCGAAGAAGCGTCGATCGCATTA-TCTCGAAACCTCACATG 177
Query 60 GCTCGAGACTCTCTGGTTCGATTACTCCGCCACCAAATCCGATTACTACCTCTACTGCCA 119
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 178 GCTAGAGACTCTCTGGTTCGATTACTCCGCCACCAAATCCGATTACTACCTCTACTGCCA 237
Query 120 CAACAttctcttcctcttcctcatcttctcct-tcgtccctctccctctcgtcttcATCG 178
||||||||||||||||||||||||||||| || |||| |||||||||||||| |||||||
Sbjct 238 CAACATTCTCTTCCTCTTCCTCATCTTCT-CTCTCGTTCCTCTCCCTCTCGTTTTCATCG 296
Query 179 AATCATCTGAATCTACCTCAGATTGGTTCAATCGCTACAAGATTCAACCCAAGGTGAAGA 238
|||||||| |||| |||||||||| ||||||||||||||| || ||||| || ||||| |
Sbjct 297 AATCATCTCAATCCACCTCAGATTTGTTCAATCGCTACAAAATCCAACCAAAAGTGAAAA 356
Query 239 ACTCGTTCTCCGAT--ATGTTCAAATGTTACAAAGCCGTCATGAAGATGTTCCTCCTCGT 296
|||| |||| | || ||||||||||||||||||| |||||||||||||||| |||||||
Sbjct 357 ACTCATTCT-C-ATCGATGTTCAAATGTTACAAAGACGTCATGAAGATGTTCATCCTCGT 414
Query 297 CGTTGGTCCATTGCAACTCGTTTCTTATCCTTCGATTCAGATGATTGAGATTCGAAGTGG 356
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 415 CGTTGGTCCATTACAACTCGTTTCTTATCCTTCGATTCAGATGATTGAGATACGAAGTGG 474
Query 357 ATTGCCATTACCATCGTGTTTGGAGATTGTAGCTCAGTTAGTGGTTTACTTCTTGGTAGA 416
||| ||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 475 ATTACCATTACCATCATGTATGGAGATTGTAGCACAGTTAGTGGTTTACTTCTTGGTAGA 534
Query 417 GGATTATACAAATTACTGGGTTCATAGATTCTTTCATTGTAAATGGGGTTATGAGAAGTT 476
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 535 GGATTATACTAATTACTGGGTTCATAGATTCTTTCATTGTAAATGGGGTTATGAGAAGTT 594
Query 477 TCATCATATTCATCATGAGTATACAGCTCCTATTGGATATGCTGCTCCATATGCTCATTG 536
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 595 TCATCATATTCATCATGAGTATACAGCTCCTATTGGTTATGCTGCTCCTTATGCTCATTG 654
Query 537 GGCTGAGGTTTTGCTTCTCGGGATTCCGACGTTTCTTGGACCGGCTATTGCTCCTGGTCA 596
|||||||||||||||||| || ||||| |||||||||||||| |||||||||||||||||
Sbjct 655 GGCTGAGGTTTTGCTTCTTGGCATTCCCACGTTTCTTGGACCTGCTATTGCTCCTGGTCA 714
Query 597 TATGATTACGTTTTGGTTGTGGATTGCTTTACGACAGATTGAGGCTATCGAAACTCATAG 656
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 715 TATGATTACCTTTTGGTTGTGGATTGCTTTACGACAGATTGAGGCTATCGAAACTCATAG 774
Query 657 CGGGTATGATTTCCCATGGACTCTGACAAAATACATTCCATTTTATGGTGGAGCTGAGTA 716
||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct 775 CGGATATGATTTCCCATGGTCTCTGACAAAGTACATTCCATTTTATGGTGGAGCTGAGTA 834
Query 717 TCATGATTACCATCACTACGTTGGAGGACAAAGCCAGAGTAACTTTGCTTCAGTGTTTAC 776
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 835 TCATGATTACCATCACTACGTTGGAGGACAAAGCCAGAGTAACTTTGCTTCAGTTTTTAC 894
Query 777 TTACTGCGATTACATCTATGGAACTGATAAAGGTTACCGATTCCAGAAGAAGCTTCTTCA 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 895 TTACTGCGATTACATCTATGGAACTGATAAAGGTTACCGATTCCAGAAGAAGCTTCTTCA 954
Query 837 GCAGAT 842
||||||
Sbjct 955 GCAGAT 960
Score = 499 bits (270), Expect = 4e-140
Identities = 467/562 (83%), Gaps = 14/562 (2%)
Strand=Plus/Plus
Query 874 ATGTTCCGATGTTATAAACAAGTCATGAAGTTGTTCCTTCTCGTCGTCGG-CACATTGCA 932
|||||| |||||| ||| | ||||||||| ||||| | |||||||| || | |||| ||
Sbjct 371 ATGTTCAAATGTTACAAAGACGTCATGAAGATGTTCATCCTCGTCGTTGGTC-CATTACA 429
Query 933 AATCGTCTCTTATCCTTCCATCCAGATGATTGGGATTCGAAGTGGTTTGCCATTACCATC 992
| |||| ||||||||||| || |||||||||| ||| |||||||| || |||||||||||
Sbjct 430 ACTCGTTTCTTATCCTTCGATTCAGATGATTGAGATACGAAGTGGATTACCATTACCATC 489
Query 993 GT-TAACGGAGATAGTAGCACAATTAGTGGTTTACTTCTTGATAGAAGATTACACTAACT 1051
| | | |||||| |||||||| |||||||||||||||||| |||| ||||| ||||| |
Sbjct 490 ATGT-ATGGAGATTGTAGCACAGTTAGTGGTTTACTTCTTGGTAGAGGATTATACTAATT 548
Query 1052 ACTGGATCCATAGATGGATGCATTGCAAATGGGGGTATGAGAAGATTCATCGA-ATCCAT 1110
||||| | ||||||| | ||||| |||||||| ||||||||| |||||| | || |||
Sbjct 549 ACTGGGTTCATAGATTCTTTCATTGTAAATGGGGTTATGAGAAGTTTCATC-ATATTCAT 607
Query 1111 CACGAGTACACATCTCCGATCGGATATGCGT-CGCCGTATGCACATTGGGGC-GAAATCT 1168
|| ||||| ||| |||| || || ||||| | | || ||||| |||| |||| || | |
Sbjct 608 CATGAGTATACAGCTCCTATTGGTTATGC-TGCTCCTTATGCTCATT-GGGCTGAGGTTT 665
Query 1169 TGATTCTAGG-AGTTCCGACGTTTCTTGGACCGGCGATCGCTCCTGGACACATTATGACG 1227
|| |||| || | |||| |||||||||||||| || || |||||||| || || || ||
Sbjct 666 TGCTTCTTGGCA-TTCCCACGTTTCTTGGACCTGCTATTGCTCCTGGTCATATGATTACC 724
Query 1228 TTTTGGTTATGGATAT-CTTTACGCCAAATCGAGGCGATTGAGACTCACAGCGGATATGA 1286
|||||||| ||||| | ||||||| || || ||||| || || ||||| |||||||||||
Sbjct 725 TTTTGGTTGTGGAT-TGCTTTACGACAGATTGAGGCTATCGAAACTCATAGCGGATATGA 783
Query 1287 TTTTCCATGGAGTCTGACAAAATTTATTCCTTTTTACGGTGGAGCTGAGTATCATGACTA 1346
||| |||||| ||||||||| | ||||| ||||| |||||||||||||||||||| ||
Sbjct 784 TTTCCCATGGTCTCTGACAAAGTACATTCCATTTTATGGTGGAGCTGAGTATCATGATTA 843
Query 1347 CCATCACTACGTTGGAGGACAAAGCCAAAGCAACTTTGCTTCAGTTTTCACTTACTGCGA 1406
||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct 844 CCATCACTACGTTGGAGGACAAAGCCAGAGTAACTTTGCTTCAGTTTTTACTTACTGCGA 903
Query 1407 TTACATTTATGGAACTGACAAA 1428
|||||| ||||||||||| |||
Sbjct 904 TTACATCTATGGAACTGATAAA 925
> AT4G22753.1 | Symbols: SMO1-3, ATSMO1, SMO1, ATSMO1-3 | sterol
4-alpha methyl oxidase 1-3 | chr4:11952019-11953609 REVERSE
LENGTH=876
Length=876
Score = 896 bits (485), Expect = 0.0
Identities = 556/591 (94%), Gaps = 2/591 (0%)
Strand=Plus/Plus
Query 839 AGATTCAAAAGAAGGTTAAGTATTCGTTGTCTGATATGTTCCGATGTTATAAACAAGTCA 898
||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 206 AGATTCAGAAGAAGGTTAAGTATTCGTTGTCTGATATGTTCCAATGTTATAAAGAAGTCA 265
Query 899 TGAAGTTGTTCCTTCTCGTCGTCGGCACATTGCAAATCGTCTCTTATCCTTCCATCCAGA 958
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 266 TGAAGTTGTTCCTTCTCGTCGTCGGCACATTGCAAATCGTTTCTTATCCTTCCATCCAGA 325
Query 959 TGATTGGGATTCGAAGTGGTTTGCCATTACCATCGTTAACGGAGATAGTAGCACAATTAG 1018
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 326 TGGTTGGGATTCGAAGTGGTTTGCCATTACCATCGTTAATGGAGATAGTAGCACAATTAG 385
Query 1019 TGGTTTACTTCTTGATAGAAGATTACACTAACTACTGGATCCATAGATGGATGCATTGCA 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 386 TGGTTTACTTCTTGATAGAAGATTACACTAACTACTGGATCCATAGATGGATGCATTGCA 445
Query 1079 AATGGGGGTATGAGAAGATTCATCGAATCCATCACGAGTACACATCTCCGATCGGATATG 1138
||||||| || ||||||||||||||||||||||| ||||||||||| || |||||||| |
Sbjct 446 AATGGGGTTACGAGAAGATTCATCGAATCCATCATGAGTACACATCACCTATCGGATACG 505
Query 1139 CGTCGCCGTATGCACATTGGGGCGAAATCTTGATTCTAGG-AGTTCCGACGTTTCTTGGA 1197
| ||||||||||| ||||||| ||| || |||||||| || | |||||||||||||||||
Sbjct 506 CATCGCCGTATGCGCATTGGGCCGAGATTTTGATTCTTGGGA-TTCCGACGTTTCTTGGA 564
Query 1198 CCGGCGATCGCTCCTGGACACATTATGACGTTTTGGTTATGGATATCTTTACGCCAAATC 1257
||||| || |||||||| || || ||||||||||||||||||||||||||||| ||| ||
Sbjct 565 CCGGCAATTGCTCCTGGCCATATAATGACGTTTTGGTTATGGATATCTTTACGACAATTC 624
Query 1258 GAGGCGATTGAGACTCACAGCGGATATGATTTTCCATGGAGTCTGACAAAATTTATTCCT 1317
|||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 625 GAGGCGATTGAGACCCACAGCGGATATGATTTTCCATGGAGTGTGACAAAATTAATTCCA 684
Query 1318 TTTTACGGTGGAGCTGAGTATCATGACTACCATCACTACGTTGGAGGACAAAGCCAAAGC 1377
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 685 TTTTACGGTGGACCTGAGTATCATGACTACCATCACTACGTTGGAGGACAAAGCCAGAGC 744
Query 1378 AACTTTGCTTCAGTTTTCACTTACTGCGATTACATTTATGGAACTGACAAA 1428
||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 745 AACTTTGCTTCGGTTTTCACTTACTGCGATTACATTTATGGAACTGATAAA 795
Score = 675 bits (365), Expect = 0.0
Identities = 695/850 (82%), Gaps = 40/850 (5%)
Strand=Plus/Plus
Query 1 ATGATCCCTTACGCC-ACAGTCGAAGACGCATCCATAGCGTTAGGCCGAAACCTCACAAC 59
||||||||||| || || || ||||| || ||| | |||||||| |||||||| ||
Sbjct 1 ATGATCCCTTA-TCCAACCGTAGAAGATGCGTCCGTGGCGTTAGGACGAAACCTTACTTG 59
Query 60 GCTCGAGACTCTCTGGTTCGATTACTCCGCCACCAAATCCGATTACTACCTCTACTGCCA 119
| ||||||| | |||||||||||||| |||||||||||| ||| | | | || |||||
Sbjct 60 GTTCGAGACGGTTTGGTTCGATTACTCAGCCACCAAATCCAATTTCCATGTATATTGCCA 119
Query 120 CAACAttct-cttcctcttcctcatcttctccttcgtccct--ctccctctcgtcttcAT 176
|| |||||| || |||||||| | ||| || || || |||| | || |||| |
Sbjct 120 CACCATTCTGGTT-CTCTTCCT--T-GTCT--TT--TCACTAGCTCCTTTTCCTCTT-GT 170
Query 177 CGAATCATCTGAATCTACCTCAGATTGGTTCAATC-GCTACAAGATTCA-ACCCAAGGTG 234
| || || |||| | | | | ||||||| ||| | | |||||||| | |||||
Sbjct 171 -G-ATTGTC-GAATGGA-C-C-GGTTGGTTCGATCAG-TTTAAGATTCAGA-AGAAGGTT 222
Query 235 AAGAACTCGTTCTCCGATATGTTCAAATGTTACAAAGCCGTCATGAAGATGTTCCTCCTC 294
||| | ||||| || ||||||||| ||||||| |||| ||||||||| ||||||| |||
Sbjct 223 AAGTATTCGTTGTCTGATATGTTCCAATGTTATAAAGAAGTCATGAAGTTGTTCCTTCTC 282
Query 295 GTCGTTGGTC-CATTGCAACTCGTTTCTTATCCTTCGATTCAGATGATTGAGATTCGAAG 353
||||| || | |||||||| |||||||||||||||| || |||||| ||| |||||||||
Sbjct 283 GTCGTCGG-CACATTGCAAATCGTTTCTTATCCTTCCATCCAGATGGTTGGGATTCGAAG 341
Query 354 TGGATTGCCATTACCATCGTGT-TTGGAGATTGTAGCTCAGTTAGTGGTTTACTTCTTGG 412
||| |||||||||||||||| | ||||||| ||||| || ||||||||||||||||||
Sbjct 342 TGGTTTGCCATTACCATCGT-TAATGGAGATAGTAGCACAATTAGTGGTTTACTTCTTGA 400
Query 413 TAGAGGATTATACAAATTACTGGGTTCATAGATTCTTTCATTGTAAATGGGGTTATGAGA 472
|||| ||||| || || |||||| | ||||||| | ||||| ||||||||||| ||||
Sbjct 401 TAGAAGATTACACTAACTACTGGATCCATAGATGGATGCATTGCAAATGGGGTTACGAGA 460
Query 473 AGTTTCATC-ATATTCATCATGAGTATACAGCTCCTATTGGATATGC-TGCTCCATATGC 530
|| |||||| | || ||||||||||| ||| | ||||| ||||| || | | || |||||
Sbjct 461 AGATTCATCGA-ATCCATCATGAGTACACATCACCTATCGGATACGCAT-CGCCGTATGC 518
Query 531 TCATTGGGCTGAGGTTTTGCTTCTCGGGATTCCGACGTTTCTTGGACCGGCTATTGCTCC 590
|||||||| ||| ||||| |||| |||||||||||||||||||||||||| ||||||||
Sbjct 519 GCATTGGGCCGAGATTTTGATTCTTGGGATTCCGACGTTTCTTGGACCGGCAATTGCTCC 578
Query 591 TGGTCATATGATTACGTTTTGGTTGTGGAT-TGCTTTACGACAGATT-GAGGCTATCGAA 648
||| ||||| || ||||||||||| ||||| | |||||||||| ||| ||||| || ||
Sbjct 579 TGGCCATATAATGACGTTTTGGTTATGGATAT-CTTTACGACA-ATTCGAGGCGATTGAG 636
Query 649 ACTCATAGCGGGTATGATTTCCCATGGACTCTGACAAAA-TACATTCCATTTTATGGTGG 707
|| || ||||| |||||||| ||||||| | |||||||| || ||||||||||| |||||
Sbjct 637 ACCCACAGCGGATATGATTTTCCATGGAGTGTGACAAAATTA-ATTCCATTTTACGGTGG 695
Query 708 AGCTGAGTATCATGATTACCATCACTACGTTGGAGGACAAAGCCAGAGTAACTTTGCTTC 767
| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 696 ACCTGAGTATCATGACTACCATCACTACGTTGGAGGACAAAGCCAGAGCAACTTTGCTTC 755
Query 768 AGTGTTT-ACTTACTGCGATTACATCTATGGAACTGATAAAGGTTACCGATTCCAGAAGA 826
|| ||| ||||||||||||||||| ||||||||||||||||| || ||| |||| ||||
Sbjct 756 GGT-TTTCACTTACTGCGATTACATTTATGGAACTGATAAAGGCTATCGAATCCATAAGA 814
Query 827 AGCTTCTTCA 836
||||||||||
Sbjct 815 AGCTTCTTCA 824
> AT4G12110.1 | Symbols: SMO1-1, ATSMO1, ATSMO1-1 | sterol-4alpha-methyl
oxidase 1-1 | chr4:7254049-7256406 FORWARD LENGTH=1447
Length=1447
Score = 808 bits (437), Expect = 0.0
Identities = 718/854 (84%), Gaps = 17/854 (2%)
Strand=Plus/Plus
Query 1 ATGATCCCTTACGCCACAGTCGAAGACGCATCCATAGCGTTAGGCCGAAACCTCACAACG 60
||||| |||||||| ||||||||||| || || || || | || ||||||||||| |||
Sbjct 149 ATGATTCCTTACGCTACAGTCGAAGAAGCTTCAATCGCACTGGGACGAAACCTCAC-ACG 207
Query 61 -CTCGAGACTCTCTGGTTCGATTACTCCGCCACCAAATCCGATTACTACCTCTACTGCCA 119
||||| ||||| |||||||||||||||||||| || ||||||||||| |||||||| ||
Sbjct 208 TCTCGAAACTCTATGGTTCGATTACTCCGCCACGAAGTCCGATTACTATCTCTACTGTCA 267
Query 120 CAACAttctcttcctcttcctcatcttctcct-tcgtccctctccctctcgtcttcATCG 178
||||||| | ||| | |||||| |||||| || |||| |||||||||||||| ||| |||
Sbjct 268 CAACATTTTGTTCTTGTTCCTCGTCTTCT-CTCTCGTTCCTCTCCCTCTCGTTTTCGTCG 326
Query 179 AATCATCT-GAATCTACCTCAGATTGGTTCAATCGCTACAAGATTCAACCCAAGGTGAAG 237
||| || | |||| | || | || ||| ||||| || ||||| || || ||||| ||
Sbjct 327 AATTGGCTCG-ATCTGCTTCTGGTTTGTTTAATCGGTATAAGATCCAGCCTAAGGTTAAT 385
Query 238 AACTCGTTCTCCGATATGTTCAAATGTTACAAAGCCGTCATGAAGATGTTCCTCCTCGTC 297
|||| || || |||||||||||||||||||||| |||||||| |||||| ||||||||
Sbjct 386 TACTCTTTATCTGATATGTTCAAATGTTACAAAGACGTCATGACGATGTTTATCCTCGTC 445
Query 298 GTTGGTCCATTGCAACTCGTTTCTTATCCTTCGATTCAGATGATTGAGATTCGAAGTGGA 357
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 446 GTTGGTCCATTGCAACTCGTTTCTTATCCTTCGATTCAGATGATTGAGATACGATCTGGA 505
Query 358 TTGCCATTACCATCGTGTTTG-GAGAT--TGTAGCTCAGTTAGTGGTTTACTTCTTGGTA 414
|| ||||||||| | || ||||| ||| | |||||||| || ||||||||| ||
Sbjct 506 TTACCATTACCAACAA-TTACAGAGATGCTGT--CACAGTTAGTAGTCTACTTCTTGATA 562
Query 415 GAGGATTATACAAATTACTGGGTTCATAGATTCTTTCATTGTAAATGGGGTTATGAGAAG 474
|| || || || || |||||||| ||||||||||||||| |||||||||| || || |||
Sbjct 563 GAAGACTACACTAACTACTGGGTACATAGATTCTTTCATAGTAAATGGGGATACGATAAG 622
Query 475 TTTCATC-ATATTCATCATGAGTATACAGCTCCTATTGGATATGCTGCTCCATATGCTCA 533
|||||| | ||||||| ||||| ||||||||||| |||||||||||||| ||||| ||
Sbjct 623 ATTCATCGAG-TTCATCACGAGTACACAGCTCCTATAGGATATGCTGCTCCTTATGCACA 681
Query 534 TTGGGCTGAGGTTTTGCTTCTCGGGATTCCGACGTTTCTTGGACCGGCTATTGCTCCTGG 593
||||||||| |||||||||||||| || ||||||||| | ||||| ||||||||||||||
Sbjct 682 TTGGGCTGAAGTTTTGCTTCTCGGAATCCCGACGTTTATGGGACCAGCTATTGCTCCTGG 741
Query 594 TCATATGATTACGTTTTGGTTGTGGATTGCTTTACGACAGATTGAGGCTATCGAAACTCA 653
||||||||| || ||||||||||||||||||||| | || || || ||||| || |||||
Sbjct 742 TCATATGATAACCTTTTGGTTGTGGATTGCTTTAAGGCAAATGGAAGCTATTGAGACTCA 801
Query 654 TAGCGGGTATGATTTCCCATGGACTCTGACAAAATACATTCCATTT-TATGGTGGAGCTG 712
|| || |||||||| ||||||| || ||||||||||| || ||| || ||||| ||||
Sbjct 802 CAGTGGATATGATTTTCCATGGAGTCCAACAAAATACATCCC-TTTCTACGGTGGTGCTG 860
Query 713 AGTATCATGATTACCATCACTACGTTGGAGGACAAAGCCAGAGTAACTTTGCTTCAGTGT 772
|||| ||||| || ||||||||||||||||||||||| || || ||||| ||||||||||
Sbjct 861 AGTACCATGACTATCATCACTACGTTGGAGGACAAAGTCAAAGCAACTTCGCTTCAGTGT 920
Query 773 TTACTTACTGCGATTACATCTATGGAACTGATAAAGGTTACCGATTCCAGAAGAAGCTTC 832
| || ||||| |||||||| ||||||||||| || |||||| ||||||| ||||||||||
Sbjct 921 TCACGTACTGTGATTACATTTATGGAACTGACAAGGGTTACAGATTCCAAAAGAAGCTTC 980
Query 833 TTCAGCAGATTCAA 846
|| ||||||| |||
Sbjct 981 TTGAGCAGAT-CAA 993
> AT4G22750.2 | Symbols: | DHHC-type zinc finger family protein
| chr4:11949180-11951424 REVERSE LENGTH=1250
Length=1250
Score = 433 bits (234), Expect = 4e-120
Identities = 293/319 (92%), Gaps = 14/319 (4%)
Strand=Plus/Plus
Query 1633 CTTATAATGCTATTGTGGAGTTATTTCTCTGTTGTTGTGACGGACCCTGGTGGTGTTCCA 1692
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 345 CTTATAATGCTACTGTGGAGTTATTTCTCTGTTGTTGTGACGGACCCTGGTGGTGTTCCA 404
Query 1693 ACGGGTTGGAGGCCAGAATTAGACATAGAGAAAAGCGATGGAAACCAAGCTTTGATTGGG 1752
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 405 ACGGGTTGGAGGCCAGAATTAGACATAGAGAAAAGCGAGGGAAACCAAGCTTTGATT--G 462
Query 1753 GAAGCTAACTCATCACTTTCGGTTGGAGATTCCTCGTCTCATGGTGTAAGATACTGTCGA 1812
| || | | | |||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 463 G-AG---A---A--GC-TTCGGTTGGAGATTCCTCGTCTCATGGTGTAAGATATTGTAGA 512
Query 1813 AAGTGCAATCAATATAAACCGCCTCGTTCTCACCATTGTTCAGTGTGTGGAAGATGCATA 1872
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 513 AAGTGCAATCAATATAAACCGCCTCGTTCTCACCATTGTTCAGTCTGTGGAAGATGCATA 572
Query 1873 CTAAAGATGGACCATCACTGTGTTTGGGTTGTAAATTGTGTTGGGGCAA-TGAATTACAA 1931
||||||||||||||||||||||||||||| || ||||||||||| |||| | || |||||
Sbjct 573 CTAAAGATGGACCATCACTGTGTTTGGGTGGTGAATTGTGTTGGTGCAAAT-AACTACAA 631
Query 1932 GTCTTTTCTCCTATTCTTG 1950
|| |||||||||||||||
Sbjct 632 ATCATTTCTCCTATTCTTG 650
Score = 327 bits (177), Expect = 2e-88
Identities = 191/198 (96%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 2137 GCGTATGAGAAGCATACAGTTAACTGGCCATACAACGTTGGTCGTAAGACAAACTTTGAA 2196
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 867 GCGTATGAGAAGCATACAGTGAACTGGCCATACAACGTTGGTCGTAAGACAAACTTTGAA 926
Query 2197 CAGGTTTTTGGAAGTGATAAAGTGTACTGGTTCGTGCCATTGTACACCGAGGACGATAAG 2256
||||||||||||||||||||| |||| |||||||||||||||||||| || |||||||||
Sbjct 927 CAGGTTTTTGGAAGTGATAAAATGTATTGGTTCGTGCCATTGTACACGGAAGACGATAAG 986
Query 2257 AGGAAGTTGCCAGCACTTGGAGGGTTAGACTTTACGAGCAGGTCGGAGTCCGAGACAGAG 2316
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 987 AAGAAGTTGCCAGCACTTGGAGGGTTAGACTTTACGAGCAGGTCGGAGTCCGAGACAGAG 1046
Query 2317 CCACTTCAGTCTCTATGA 2334
|| |||||||||||||||
Sbjct 1047 CCGCTTCAGTCTCTATGA 1064
Score = 313 bits (169), Expect = 6e-84
Identities = 190/200 (95%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 1434 AACCCCGACAATGGCGTGGAACGTGTTCAAGTTCTGCACAGCACTTCGCGCCTTGGGTTC 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 80 AACCCCGACAATGGCGTGGAACGTGTTCAAGTTCTGCACAGCACTTCGCGCCTTGGGTTC 139
Query 1494 GATCATGATCTTAATTGTTATCGGGATCATCGGATTCACATACTACGCCGTTGTCGTCGT 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 140 GATCATGATCTTAATTGTTATCGGGATCATCGGATTCACATACTACGCCGTTGTCGTCGT 199
Query 1554 GAATTACGGACCAGCTCTATTGATCGGTGGTGTCGATTCATTACTAGCTCTTCTTGTTTT 1613
||||||||||| |||||| |||||||||||||||||||||||||| || |||| || ||
Sbjct 200 TAATTACGGACCTGCTCTACTGATCGGTGGTGTCGATTCATTACTATCTGTTCTCGTCTT 259
Query 1614 AGC-TCTGTTCCACTTTCTG 1632
||| | | ||||||||||||
Sbjct 260 AGCGT-TCTTCCACTTTCTG 278
Score = 147 bits (79), Expect = 6e-34
Identities = 85/88 (97%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 2002 GTATTGAACATAGCATTTGCGCTAAGTGTCCTAGGCTTCCTAATTATGCACATAATGTTA 2061
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 780 GTATTGAACATAGCATTTGCCCTAAGTGTCCTAGGCTTCCTAATAATGCACATAATGTTG 839
Query 2062 GTCGCTCGTAACACCACAACTATTGAGG 2089
||||||||||||||||||||||||||||
Sbjct 840 GTCGCTCGTAACACCACAACTATTGAGG 867
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 115862857860
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5