BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg329576
Length=1158
Score E
Sequences producing significant alignments: (Bits) Value
AT4G19880.2 | Symbols: | Glutathione S-transferase family prot... 1820 0.0
AT5G45020.1 | Symbols: | Glutathione S-transferase family prot... 699 0.0
AT5G44990.1 | Symbols: | Glutathione S-transferase family prot... 556 1e-157
> AT4G19880.2 | Symbols: | Glutathione S-transferase family protein
| chr4:10784391-10786423 REVERSE LENGTH=1496
Length=1496
Score = 1820 bits (985), Expect = 0.0
Identities = 1104/1160 (95%), Gaps = 13/1160 (1%)
Strand=Plus/Plus
Query 1 ATGTCTTATTCCACGATCATTAGCAACACCAGCTTCCTCGCTTTCGCTTCAAAGTTCACT 60
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 48 ATGTCTTATTCCACGATCATTAGCAACACCAGCTTCCTCTCTCTCGCTTCAAAGTTCACT 107
Query 61 ACTCGTGGATCTCGTCTTCAGTGTACATTATCAATGGCTCGATCTGCGGTTGATGAGACA 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 108 ACTCGTGGATCTCGTCTTCAGTGTACAGTATCAATGGCTCGATCTGCGGTTGATGAGACA 167
Query 121 TCAGATTCAGGAGCTTTTCAAAGAACTGCATCAACATTTCGAAACTTTGTTTCAAGAGAT 180
|||||||||||||||||||||||||||||||| ||||| || ||||| ||||||| ||||
Sbjct 168 TCAGATTCAGGAGCTTTTCAAAGAACTGCATCGACATTCCGTAACTTCGTTTCAAAAGAT 227
Query 181 TCAAATTCTCAATTTCCAGCTGAATCTGGTAGATACCATCTTTACATATCGTATGCTTGT 240
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 228 TCCAATTCTCAGTTTCCAGCTGAATCTGGTAGATACCATCTTTACATATCGTATGCTTGT 287
Query 241 CCATGGGCTTCTAGATGTCTTTCATACTTGAAGATCAAAGGACTTGACGATGCAATAAGC 300
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 288 CCATGGGCTTCTAGATGCCTTTCATACTTAAAGATCAAAGGACTTGACGATGCAATAAGC 347
Query 301 TTCTCGTCTGTAAAACCCATTTGGGGAAGAACTAAAGAAACCGATGAGCATATGGGATGG 360
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 348 TTCTCGTCTGTAAAACCCATTTGGGGAAGAACCAAAGAAACCGATGAACATATGGGATGG 407
Query 361 GTCTTTCCGA-GTTCAGATACCGAGGTTCAAGGAGCTGATCCTGATCATCTTAATGGTGC 419
|||||||| | ||||||||||||| |||| ||||||||||||||| ||||||||||||||
Sbjct 408 GTCTTTCC-AGGTTCAGATACCGAAGTTCCAGGAGCTGATCCTGACCATCTTAATGGTGC 466
Query 420 TAAGAGTGTAAGAGAACTCTATGAGATTGCTAGCCCAAACTACACTGGGAAGTATACTGT 479
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 467 TAAGAGTGTAAGAGAACTCTATGAGATTGCTAGCCCAAACTACACCGGGAAGTATACTGT 526
Query 480 TCCTGTTCTGTGGGATAAGAAGCTCAAAACTGTTGTTAACAACGAGAGTGCAGAAATAAT 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 527 TCCTGTTCTGTGGGATAAGAAGCTCAAAACTGTTGTTAACAACGAGAGTGCAGAAATAAT 586
Query 540 CCGGATGTTCAACACTGAGTTCAATCATATTGCGGGAAATCCTGATCTCGACCTTTACCC 599
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 587 CCGGATGTTCAACACTGAGTTCAATCATATTGCGGGAAATCCTGATCTTGATCTTTACCC 646
Query 600 TTCTCATCTCCAAGCTAAAATCGATGAAACTAATGAATGGATCTACAATGGGATAAATAA 659
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 647 TTCCCATCTCCAAGCTAAAATCGATGAAACTAATGAATGGATTTACAATGGGATAAATAA 706
Query 660 CGGTGTCTATAGATGCGGGTTTGCAAAGAAACAAGGACCTTATGAGGAGGCAGTTGAGCA 719
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 707 TGGTGTCTATAGATGCGGGTTTGCAAAGAAACAAGGACCTTATGAGGAGGCAGTGGAGCA 766
Query 720 AGTGTATGAAGCATTAGATAGATGCGAGGAGATTCTTGGAAAACATCGGTACATCTGTGG 779
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 767 AGTGTATGAAGCATTAGATAGATGTGAGGAGATTCTTGGAAAACATCGGTACATCTGTGG 826
Query 780 TAACACTTTGACTGAAACAGATATCAGATTGTTTGTCACCCTTATAAGATTTGACGAGGT 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 827 TAACACTTTGACTGAAACAGATATCAGATTGTTTGTCACCCTTATAAGATTTGACGAGGT 886
Query 840 AATAGATTCGAGTTCATACTTCCAAACCAAGAAAAAGAAACACACAATATGCGAACAAAT 899
|| | ||| | | | | ||| ||| |||||||||||| |||| ||||| |||| |||
Sbjct 887 AA--G-TTC-A-TAC-T--TTC-AAAGCAAGAAAAAGAAGTACACCATATGTGAACGAAT 937
Query 900 CTGTAATGTTGAAACGTTGATGCAGGTTTATGCGGTCCACTTCAAATGCAACAAGAAACT 959
|| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 938 CTCTAATGTTGAAACGTTGATCCAGGTTTATGCAGTCCACTTCAAATGCAACAAGAAACT 997
Query 960 GATAAGGGAGTATCCGAATCTT-TTCAACTACACGAAAGACATTTTCCAAATCCCGGGTA 1018
|||||||||||||||||| || |||||||||||||||||||||||||| ||||| ||||
Sbjct 998 CATAAGGGAGTATCCGAAT-TTGTTCAACTACACGAAAGACATTTTCCAGATCCCCGGTA 1056
Query 1019 TGAGTAGCACGGTGAACATGAATCACATCAAGCAGCATTACTATGGAAGCCACCCGTCGA 1078
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1057 TGAGTAGCACGGTTAACATGAATCACATCAAGCAGCATTACTATGGAAGCCACCCGTCGA 1116
Query 1079 TCAACCCTTTCGGAATCATCCCTCATGGACCAAACATCGATTACACATCCCCTCATGATC 1138
|||||||||| || |||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 1117 TCAACCCTTTTGGGATCATCCCTCATGGACCAAACATCGATTACACTTCGCCTCATGATC 1176
Query 1139 GACACAGATTCTCCAAATGA 1158
||||||||||||||||||||
Sbjct 1177 GACACAGATTCTCCAAATGA 1196
> AT5G45020.1 | Symbols: | Glutathione S-transferase family protein
| chr5:18168682-18170651 FORWARD LENGTH=1262
Length=1262
Score = 699 bits (378), Expect = 0.0
Identities = 637/760 (84%), Gaps = 26/760 (3%)
Strand=Plus/Plus
Query 93 AATGGCTCGATCTGCGGTTGATGAGACATCAGATTCAGGAGCTTTTCAAAGAACTGCATC 152
||||||| | |||| |||||||||||||||||| || ||||||||| |||||| |||||
Sbjct 121 AATGGCTAGGTCTGGGGTTGATGAGACATCAGAATCTGGAGCTTTTGTAAGAACAGCATC 180
Query 153 AACATTTCGAAACTTTGTTTCA-AGAGATTCAAATTCTCAATTTCCAGCTGAATCTGGTA 211
|||||| || |||||||||||| | |||| | ||||||| |||||||||||||| || |
Sbjct 181 AACATTCCGCAACTTTGTTTCACA-AGATCCTGATTCTCAGTTTCCAGCTGAATCAGGAA 239
Query 212 GATACCATCTTTACATATCGTATGCTTGTCCATGGGCTTCTAGATGTCTTTCATACTTGA 271
||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| |
Sbjct 240 GATACCATCTTTACATATCTTATGCTTGTCCATGGGCTTGTAGATGTCTTTCTTACTTAA 299
Query 272 AGATCAAAGGACTTGACGATGCAATAAGCTTCTCGTCTGTAAAACCCATTTGGGGAAGAA 331
|||||||||||||||| || ||||| | ||||||||| || | |||||||||||||||
Sbjct 300 AGATCAAAGGACTTGATGAAGCAATCACCTTCTCGTCGGTTCATGCCATTTGGGGAAGAA 359
Query 332 CTAAAGAAACCGATGAGCATATG-GGATGGGTCTTT-CC-GAGTTCAGATACCGAGGTTC 388
| || ||||| ||||| |||| | |||||||| ||| || || ||| ||||||||| | |
Sbjct 360 CCAAGGAAACTGATGATCATA-GAGGATGGGT-TTTCCCGGA-TTCGGATACCGAGCTCC 416
Query 389 AAGGAGCTGATCCTGATC-ATCTTAATGGTGCTAAGAGTGTAAGAGAACTCTATGAGATT 447
|||||||| ||||| | ||||||||||||| || ||||| ||||||||||| ||||||
Sbjct 417 CTGGAGCTGAGCCTGA-CTATCTTAATGGTGCCAAAAGTGTGAGAGAACTCTACGAGATT 475
Query 448 GCTAGCCCAAACTA-CACTGGGAAGTATACTGTTCCTGTTCTGTGGGATAAGAAGCTCAA 506
|||||||||||||| | |||||||| |||||||||||||| |||||||||||||| ||
Sbjct 476 GCTAGCCCAAACTATGA-AGGGAAGTACACTGTTCCTGTTCTTTGGGATAAGAAGCTTAA 534
Query 507 AACTGTTGTTAACAACGAGAGTGCAGAAATAATCCGGATGTTCAACACTGAGTTCAATCA 566
|||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||
Sbjct 535 GACTGTTGTTAACAATGAGAGTTCAGAGATAATCCGGATGTTCAACACTGAGTTCAATGG 594
Query 567 TATTGCGGGAAATCCTGATCTC--GACCTTTACCCTTCTCATCTCCA-AG-C-TAAAATC 621
||||||| ||| || | || | |||||||| |||||||||||| | || | ||| ||
Sbjct 595 TATTGCGA-AAACCCCG-TCACTTGACCTTTATCCTTCTCATCTC-AGAGACGTAA--TC 649
Query 622 GATGAAACTAATGAATGGATCTACAATGGGATAAATAACGGTGTCTATAGATGCGGGTTT 681
| || ||||| | |||| | | ||| || ||||| |||||||| |||| ||| ||||||
Sbjct 650 AACGAGACTAACGGATGGGTTTTCAACGGAATAAACAACGGTGTTTATAAATGTGGGTTT 709
Query 682 GCAAAGAAACAAGGACCTTATGAGGAGGCAGTTGAGCAAGTG-TATGAAGCATTAGATAG 740
|||| |||||||| ||| ||| | |||||||| || | ||| ||||||||| |||||||
Sbjct 710 GCAAGGAAACAAGAACCCTATAATGAGGCAGT-GAACCAGTTATATGAAGCAGTAGATAG 768
Query 741 ATGCGAGGAGATT-CTTGGAAAACATCGGTACATCTGTGGTAACACTTTGACTGAAACAG 799
||| ||||| | | || |||||||| || |||||||| || |||||||| |||||| |||
Sbjct 769 ATGTGAGGA-AGTACTCGGAAAACAACGATACATCTGCGGAAACACTTTCACTGAAGCAG 827
Query 800 ATATCAGATTGTTTGTCACCCTTATAAGATTTGACGAGGT 839
||||| |||| || ||||| || ||||||||||| |||||
Sbjct 828 ATATCCGATTATTCGTCACTCTCATAAGATTTGATGAGGT 867
> AT5G44990.1 | Symbols: | Glutathione S-transferase family protein
| chr5:18163158-18164768 FORWARD LENGTH=1117
Length=1117
Score = 556 bits (301), Expect = 1e-157
Identities = 578/710 (81%), Gaps = 26/710 (4%)
Strand=Plus/Plus
Query 142 AGAACTGCATCAACATTTCGAAACTTTGTTTCAAGAGATTCAAATTCTCAATTTCCAGCT 201
||||| ||| || | || |||||||||||||||| |||| | | ||||| ||||||||
Sbjct 104 AGAACCGCAACATCGTTCCGAAACTTTGTTTCAAAAGATCCTGACTCTCAGTTTCCAGCA 163
Query 202 GAATCTGGTAGATACCATCTTTACATATCGTATGCTTGTCCATGGGCTTCTAGATGTCTT 261
||||| || |||||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct 164 GAATCAGGAAGATACCATCTTTATATCTCTTATGCTTGTCCATGGGCTTCTAGATGTCTT 223
Query 262 TCA-TACTTGAAGA-TCAAAGGACTTGACGATGCAATAAGCTTCTCGTCTGTAAAACC-C 318
|| | |||||| | |||||||||||||| | || |||||||| |||||||| |||| |
Sbjct 224 GCAAT-CTTGAA-ACTCAAAGGACTTGACAAAGCTATAAGCTTTTCGTCTGTTCAACCAC 281
Query 319 ATTTGGGGAAGA-ACTAAAGAAACCGATGAGCATATGGGATGGGTCTTTCC-GAGTTCAG 376
||||| ||| | || ||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct 282 -TTTGGAGAA-ATACCAAAGAAAACGACGAGCATATGGGATGGGTTTTTCCAGA-TTCAG 338
Query 377 ATACCGAGGTTCAAGGAGCTGATCCTGATCATCTTAATGGTGCTAAGAGTGTAAGAGAAC 436
|||| ||||||| |||||||| | ||||||| | |||||||| || || ||||||||||
Sbjct 339 ATACAGAGGTTCTTGGAGCTGAACGTGATCATATCAATGGTGCGAAAAGCGTAAGAGAAC 398
Query 437 TCTATGAGATTGCTAGC-CCAAACTACACTGGG-AAGTATACTGTTCCTGTTCTGTGGGA 494
| ||||| || |||||| |||| |||||| ||| || ||||| ||||||||||| |||||
Sbjct 399 TTTATGATATCGCTAGCTCCAA-CTACAC-GGGCAAATATACGGTTCCTGTTCTTTGGGA 456
Query 495 TAAGAAGCTCAAAACTGTTGTTAACAACGAGAG-TGCAGAAATAATCCGGATGTTCAACA 553
||||||||| || ||| | |||||||| ||||| | | || ||| |||| ||||||||||
Sbjct 457 TAAGAAGCTTAAGACTATAGTTAACAATGAGAGCT-CTGAGATACTCCGAATGTTCAACA 515
Query 554 CTGAGTTCAATCATATTGCGGGAAATCCTGATCTCGACCTTTACCCTTCTCATC-TCCAA 612
| |||||||||||| |||| | ||| ||| |||||| ||||| || | || | ||| |
Sbjct 516 CCGAGTTCAATCATGTTGCAGAAAACCCTTCTCTCGATCTTTATCCACC-CAACCTCCGA 574
Query 613 GCTAAAATCGATGAAACTAATGAATGGAT-CTACAATGGGATAAATAACGGTGTCTATAG 671
|| | ||||||||| ||||| |||||||| | || |||||||||| |||||||| ||||
Sbjct 575 GCCATAATCGATGAGACTAACGAATGGATTC-ACGATGGGATAAACAACGGTGTTTATAA 633
Query 672 ATGCGGGTTTGCAAAGAAA-CAAGGACCTTATGAGGAGGCAGTTGAG-CAAGTGTATGAA 729
||| |||||||| | ||| |||| | ||||||| | || ||| || | | ||||||||
Sbjct 634 ATGTGGGTTTGCTAC-AAATCAAGAAACTTATGATGTGGAAGT-GAAACGATTGTATGAA 691
Query 730 GCATTAGATAGATGCGAGGAGATTCTTGGAAAACATCGGTA-CATCTGTGGTAACACTTT 788
||||| || ||||||| || || || ||||||| |||| | | ||||| |||||| |
Sbjct 692 GCATTGGACCGATGCGAAGACATACTCAGAAAACAACGGTTTCTT-TGTGGAAACACTCT 750
Query 789 GACTGAAACAGATATCAGATTGTTTGTCACCCTTATAAGATTTGACGAGG 838
||||||| |||||||| |||| || ||||| | ||||||||||||||||
Sbjct 751 GACTGAATCAGATATCCGATTATTCGTCACTGTCATAAGATTTGACGAGG 800
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 56827016940
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5