BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg329577
Length=2340
Score E
Sequences producing significant alignments: (Bits) Value
AT4G19865.1 | Symbols: | Galactose oxidase/kelch repeat superf... 1483 0.0
AT4G19870.1 | Symbols: | Galactose oxidase/kelch repeat superf... 785 0.0
> AT4G19865.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr4:10780956-10782365 REVERSE LENGTH=1410
Length=1410
Score = 1483 bits (803), Expect = 0.0
Identities = 1071/1195 (90%), Gaps = 40/1195 (3%)
Strand=Plus/Plus
Query 1160 TGGAACCACCGGAGAAGAAGAAGACTAAGAATTCGTCTCCACCACAATCACCTCCATCGT 1219
||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||
Sbjct 14 TGGAACCACCGGAGAAGAAGAAGACTAAGAACTCGTCTCCACCACATTCACCTCC---GT 70
Query 1220 CGTCGTCATCTCCGTCGCTTTCTTCT-CTCCCTGACGAAATCTTCGTGAACTGCTTAGCT 1278
||||||||||||||||||||||| || || || || |||||| ||||| |||||||||||
Sbjct 71 CGTCGTCATCTCCGTCGCTTTCT-CTACTTCCAGAAGAAATCGTCGTGCACTGCTTAGCT 129
Query 1279 CGGATCTCGAGGTCATACTACCCAACACTCTCACTCGTTTCGAAAAGCTTCCGTTCAATT 1338
|||||||| || | ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 130 CGGATCTCAAGATTGTACTACCCAACGCTCTCACTCGTTTCGAAAAGCTTCCGCTCAATT 189
Query 1339 CTCTCTTCCACCGAGCTCTTCGCAGCCAGATCTCACATCGGAAGCACTGAACAGTGTGTC 1398
||||||||||| ||||||| |||| ||||||||||| |||||||||||||||||||||||
Sbjct 190 CTCTCTTCCACGGAGCTCTACGCAACCAGATCTCACCTCGGAAGCACTGAACAGTGTGTC 249
Query 1399 TATGTCTGTCTATGGGATCGCAGTTATCAATTTCCCCAATGGCTTAGACTATGGGTTAAC 1458
||| ||||||||||||||| |||||||||||||||||||||||||||||| | ||||||
Sbjct 250 TATCTCTGTCTATGGGATCCCAGTTATCAATTTCCCCAATGGCTTAGACTCTTAGTTAAC 309
Query 1459 CCTAATCGAACCCTAGCCAACTCCATGATTaagaagagaaggaagaagaagaagaagaCA 1518
||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 310 CCTAACCGAACCCTAGCCAACTCCATCATTAAGAAGAGAAGGAAGAAGAAGAAGA---CA 366
Query 1519 ACTGGACCAATGTTAGTTCCGATTACCTCGTCTAATTTTACATCTGTATCAAAAGCCACC 1578
||||||| ||||||||||||| ||||||||||||| |||||||| |||||||||||||||
Sbjct 367 ACTGGACAAATGTTAGTTCCGCTTACCTCGTCTAAGTTTACATCAGTATCAAAAGCCACC 426
Query 1579 GTTGTTGTTGGTTCAGAAATTTATGTAATTGGCGGCCCAGTCGACTCTGAACCATCCTCC 1638
||||| |||||||| || ||||||||| ||||||| ||||||||||| | ||
Sbjct 427 GTTGTAGTTGGTTCTGAGATTTATGTACTTGGCGGTCCAGTCGACTCCG--CC------- 477
Query 1639 ACCGTGCGGGTGCTTGATTGTTGCAGTCACACTTGGCGCGATGCACCGAGCATGACTATA 1698
|||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 478 ---GTGCGGGTGCTTGATTGTTGCAGTCACACTTGGCGCGATGCACCGAGCATGAATGTA 534
Query 1699 GTCC-GAATGAATGCGTTGGCATGTTTCCACGATGGGAAAATATATGTAATGGGAGGGTG 1757
||| |||||||||| | |||||||||||||||||||||||| || ||||||||||| ||
Sbjct 535 -TCCCGAATGAATGCCTGGGCATGTTTCCACGATGGGAAAATTTACGTAATGGGAGGTTG 593
Query 1758 CCAAGGATTAGAGGACGAACCATGGGCTGAGGTGTTCGATACAAAGACTAAGACTTGGCA 1817
|||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| |
Sbjct 594 CCAAGGATTAAAGGACGAACCATGGGCTGAGGTGTTCAATACAAAGACTCAGACTTGGGA 653
Query 1818 ACACCTTCCTGAGCCGGATACTGAGGTACGTAAGTGTTCCATTTACAGTATTGCAGAGAT 1877
| ||| |||||||||| || |||||||||||||||||||||| |||| | | || |||
Sbjct 654 AGGCCTCCCTGAGCCGGGTAGTGAGGTACGTAAGTGTTCCATTGACAGAAGCGGAGTGAT 713
Query 1878 TGAAG-AAACGATTCAGTTTGGGAATGTAAACGAGACGTATGCTTACCACACGAAGCAAT 1936
||||| ||| |||| ||||||| ||||||||||||| || ||||||| ||||||||| ||
Sbjct 714 TGAAGGAAA-GATTGAGTTTGGAAATGTAAACGAGATGTGTGCTTACGACACGAAGCTAT 772
Query 1937 GTAAATGGGAA-AGCCGTGTAAAACAAAAGT-----T--GAAGTCAGAATGTATGATTGA 1988
|||||||||| | ||||||| ||||||| | || ||||||||||||||||||
Sbjct 773 GTAAATGGGAGTATT-GTGTAAA-CAAAAGTGCAGCTTTGAGGTCAGAATGTATGATTGA 830
Query 1989 GAATGTTTCATATGGCTAT-TGGAATATGCGCTTGTTGTGGTATGACAATGACTTACAAA 2047
||||||||||||||||| | ||||| ||||||||||||||||||||||||||| ||||||
Sbjct 831 GAATGTTTCATATGGCT-TCTGGAACATGCGCTTGTTGTGGTATGACAATGACATACAAA 889
Query 2048 AGGATTATTGGAAAAGATTGGAAGGGTTAGACTCACTAGATGAGATGTACATGAGGAATG 2107
||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct 890 AGGATTATTGGAAAAGATTGGAAGGGTTAGAGTCACTAGATGATAAGTACATGAGGAATG 949
Query 2108 GTGGCTCAAGTGGTAATACGACTAAACTAGTTAGC-TGTGGTGGGAAACTCTTACTTTTA 2166
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 950 GTGGCTCAAGTGGTAATACGACTAAACTAGTT-GCATGTGGTGGGAAACTCTTACTTTTA 1008
Query 2167 TGGGAAGGGTATATGAAGCATAATCCCAATAATAGGAAGAAGATTTGGTGCGCTGAAATC 2226
|||||||| |||||||||||||| |||||||||||||||||||||||||| || | |||
Sbjct 1009 TGGGAAGGATATATGAAGCATAACCCCAATAATAGGAAGAAGATTTGGTGTGCGGTGATC 1068
Query 2227 GCTATAGAAAAGCGTGATGGAGGTGGAGTTTGGGGAATTGTTGAGAGGGTTGAGGTTTTG 2286
|| ||||| ||| |||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 1069 GCGATAGAGAAGTGTGATGGAGGTGGAGTTTGGGGAATTGTTGAGAGTGTTGATGTTTTG 1128
Query 2287 CATAAC-GTCCCTATATCATGTCAGCTCTTGCATTGTCTCGTTGTCTCGGTTTGA 2340
||| | ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1129 TATA-CTGTCCCCATATCATGTCAGCTCTTGCATTGTCTCGTTGTCTCGGTTTGA 1182
Score = 717 bits (388), Expect = 0.0
Identities = 904/1137 (80%), Gaps = 99/1137 (9%)
Strand=Plus/Plus
Query 68 CTCTGTCGCCGTCATCTCCGTCGTTTTCTTCT-CTCCCAGACGAAATCGTCGTGAACTGC 126
||| |||| |||||||||||||| |||| ||| || ||||| |||||||||||| |||||
Sbjct 65 CTCCGTCGTCGTCATCTCCGTCGCTTTC-TCTACTTCCAGAAGAAATCGTCGTGCACTGC 123
Query 127 TTAGCTCGGATCTCAAGATTGTACTACTCAACACTCTCAATCGTTTCGAAAAGCTTCCGC 186
||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||
Sbjct 124 TTAGCTCGGATCTCAAGATTGTACTACCCAACGCTCTCACTCGTTTCGAAAAGCTTCCGC 183
Query 187 TCAATTCTCTCTTCCACCGAGCTCTACGCAGTTAGATCTCACCTCGGAAGCACCGAGCAG 246
||||||||||||||||| |||||||||||| |||||||||||||||||||| || |||
Sbjct 184 TCAATTCTCTCTTCCACGGAGCTCTACGCAACCAGATCTCACCTCGGAAGCACTGAACAG 243
Query 247 TGTGTCTATGTCTGTCTACGGGATAAAAGTTATCAATTTCCGAAATGGTTTACACTCTGG 306
||||||||| |||||||| ||||| |||||||||||||| ||||| ||| |||||
Sbjct 244 TGTGTCTATCTCTGTCTATGGGATCCCAGTTATCAATTTCCCCAATGGCTTAGACTCTT- 302
Query 307 ACT-AACCCTAATCGA------GCCAACTCCATGATTGAGAAGAAGA-GGAAGAAAAAGA 358
| | |||||||| ||| ||||||||||| ||| |||||| || ||||||| ||||
Sbjct 303 AGTTAACCCTAACCGAACCCTAGCCAACTCCATCATTAAGAAGA-GAAGGAAGAAGAAGA 361
Query 359 AGATAATT--A----TG---GTTCCAGCT-ACCTCTTCTAATTTTCCAT-ATGTATCACA 407
||| || | | || ||||| ||| ||||| ||||| ||| ||| | |||||| |
Sbjct 362 AGACAACTGGACAAATGTTAGTTCC-GCTTACCTCGTCTAAGTTTACATCA-GTATCAAA 419
Query 408 ATCCGCCGTAGTTGTTGGTTCTGAAATTTATGTTATCGATAGAGCACCT-TC--CTCTGC 464
| || |||| || ||||||||||| |||||||| | | | | | || || ||| ||
Sbjct 420 AGCCACCGTTGTAGTTGGTTCTGAGATTTATGT-A-CT-TGGCGGTCCAGTCGACTCCGC 476
Query 465 TGTGAGGGTCCTC-ACTTGTGGCAGTCACACTTGGCGTGATGCCCCTAGTATGACCGTAG 523
||| |||| || | |||| |||||||||||||||| ||||| || || |||| |||
Sbjct 477 CGTGCGGGTGCTTGA-TTGTTGCAGTCACACTTGGCGCGATGCACCGAGCATGAATGTAT 535
Query 524 CCCGGAA-GAATGCAATCATTTATGTTTACA--ATGGGAAAATCTATGTAATGGGAGGGT 580
|||| || |||||| | |||||| || |||||||||| || ||||||||||| |
Sbjct 536 CCCG-AATGAATGCC-TGGGC-ATGTTTCCACGATGGGAAAATTTACGTAATGGGAGGTT 592
Query 581 GTGAAGGATTAGAGGATGAACCATGGGCTGAGGTATTTGATACAAAGACTCAGACTTGGG 640
| |||||||| |||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct 593 GCCAAGGATTAAAGGACGAACCATGGGCTGAGGTGTTCAATACAAAGACTCAGACTTGGG 652
Query 641 AACCCCTTCCTGATCCGGGTACTGAGGTACGTAAGAGTTACATTTTCAGTATCGGAGAGA 700
|| ||| ||||| ||||||| ||||||||||||| ||| |||| ||| | ||||| ||
Sbjct 653 AAGGCCTCCCTGAGCCGGGTAGTGAGGTACGTAAGTGTTCCATTGACAGAAGCGGAGTGA 712
Query 701 TCGAAGGAAAGATTCAGATTCACTTTGGGACTTTAAAGGAGATGTATGCTTATGACACGA 760
| |||||||||||| || || | || | | |||| ||||||| |||||| |||||||
Sbjct 713 TTGAAGGAAAGATTGAG-TT---T--GGAAATGTAAACGAGATGTGTGCTTACGACACGA 766
Query 761 AGCAATGTAAATGGGAAAACCGTGTAAACAAATA-TGCAACGTATGCGAGGCCAGAATGT 819
||| |||||||||||| | ||||||||||| | |||| | | || ||| ||||||||
Sbjct 767 AGCTATGTAAATGGGAGTATTGTGTAAACAAA-AGTGCAGCTT-TG--AGGTCAGAATGT 822
Query 820 ATGATTGAGAATGTATCCTTCTCCTTTG-CTTCCGAGGGTGGTATATATCGTCGAGACCA 878
|||||||||||||| | | | | || |||| ||| | | || | || |
Sbjct 823 ATGATTGAGAATGT-T--T-CA--TATGGCTTC------TGG-A-ACAT-G-CG---CTT 863
Query 879 GTTCCGGTGGTATGACaa--a-a-a-aaaGGG-TTATTGGAAAGAGGT-GAAAGGGTTAG 931
||| | ||||||||||| | | | ||| || |||||||||| || | | |||||||||
Sbjct 864 GTT--G-TGGTATGACAATGACATACAAAAGGATTATTGGAAA-AGATTGGAAGGGTTAG 919
Query 932 ACTCATTAC-T-ACAGAGGTACA-GCAAGAATGGTGGCTCAAGTCATAATACGACTGAAC 988
| ||| || | | | || |||| | | |||||||||||||||| |||||||||| |||
Sbjct 920 AGTCACTAGATGATA-AG-TACATG-AGGAATGGTGGCTCAAGTGGTAATACGACTAAAC 976
Query 989 TAGTTAGC-TGTGGTGGGAAACTCTTACTTATT-TGGGAAGGGTATATGAAGCATAATCC 1046
||||| || ||||||||||||||||||||| || |||||||| |||||||||||||| ||
Sbjct 977 TAGTT-GCATGTGGTGGGAAACTCTTACTT-TTATGGGAAGGATATATGAAGCATAACCC 1034
Query 1047 CAATGATAGGAAGAAGATTTGGTGCGCGGAAATCGGGATAGAAAA-TCATGATGGAGATG 1105
|||| ||||||||||||||||||| |||| |||| |||||| || | |||||||| ||
Sbjct 1035 CAATAATAGGAAGAAGATTTGGTGTGCGGTGATCGCGATAGAGAAGTG-TGATGGAGGTG 1093
Query 1106 -AGCTTTGGGGGAAT-GTTGAGTG-GTTTGATGTTTTGCATACCGTCCCCACATCAT 1159
|| ||||||| ||| |||||| | ||| ||||||||| |||| ||||||| |||||
Sbjct 1094 GAG-TTTGGGG-AATTGTTGAGAGTGTT-GATGTTTTGTATACTGTCCCCATATCAT 1147
> AT4G19870.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr4:10782871-10784256 REVERSE LENGTH=1386
Length=1386
Score = 785 bits (425), Expect = 0.0
Identities = 965/1211 (80%), Gaps = 95/1211 (8%)
Strand=Plus/Plus
Query 1 ATGAAACTCCTAGCAAAACCACCGGAAAAGAAGAAGAAGAAGAGGACGACAGATGATTCG 60
||||||| || |||||||||||||| ||||||||| ||||||||||||| ||| ||||
Sbjct 1 ATGAAACGCCAAGCAAAACCACCGG---AGAAGAAGACGAAGAGGACGACAAATGCTTCG 57
Query 61 TCACCAACTCTGTCGCCGTCATCTCCGTCGTTTTCTTCTCTCCCAGACGAAATCGTCGTG 120
|||||||||| |||| | |||||||| ||||| ||||||||||||||||||||||||| |
Sbjct 58 TCACCAACTCCGTCGTCTTCATCTCCTTCGTTGTCTTCTCTCCCAGACGAAATCGTCGAG 117
Query 121 AACTGCTTAGCTCGGATCTCAAGATTGTACTACT-CAACACTCTCAATCGTTTCGAAAAG 179
|||||||||||||||||||| || | |||||| | |||||||||||||||||||||||||
Sbjct 118 AACTGCTTAGCTCGGATCTCGAGGTCGTACTA-TCCAACACTCTCAATCGTTTCGAAAAG 176
Query 180 CTTCCGCTCAATTCTCTCTTCCACCGAGCTCTACGCAGTTAGATCTCACCTCGGAAGCAC 239
|||||| |||||| |||| |||||||||||||| | || |||||||||||| ||| |||
Sbjct 177 CTTCCGTTCAATTATCTCATCCACCGAGCTCTATGTAGCCAGATCTCACCTCCGAAACAC 236
Query 240 CGA-GCAGTGTGTCTATGTCTGTCTA-CGGGATAAAAGTTATCAATTTCCGAAATGGTTT 297
||| | |||||||||||||||||||| | | ||||||||| | ||||||| |||||||||
Sbjct 237 CGAAG-AGTGTGTCTATGTCTGTCTATCTG-ATAAAAGTTTTGAATTTCCCAAATGGTTT 294
Query 298 ACACTCTGGACTAACCCTAATCGAGCCAACTCCATGATTGAGAAGAAGAGGAAGAAAAAG 357
||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||| |||
Sbjct 295 ACACTCTGGGTTAACCCTAATCAAGCCAACTCCATGGTTGAGAAGAAGAGGAAGAAGAAG 354
Query 358 AAGATAATT--A---T-G--G-TTCCAGCTACCTCTTCTAAT-TTTC-CATATGTATCAC 406
|||| |||| | | | | ||||| | ||||||||||| |||| | | ||||||
Sbjct 355 AAGACAATTGGAAAGTTGTTGGTTCCAATTCCCTCTTCTAATCTTTCTCCT--GTATCAA 412
Query 407 AATCCGCCGTAGTTGTTGGTTCTGAAATTTATGTTATCG----ATA-G---A-G---CAC 454
|||||||| ||| ||||||||||||||| ||||| |||| | | | | | |||
Sbjct 413 AATCCGCCATAGCTGTTGGTTCTGAAATATATGTGATCGGCGGAAAAGTCGATGGTGCAC 472
Query 455 CT-TCCTCTGCTGTGAGGGTCCTC-ACTTGTGGCAGTCACACTTGGCGTGATGCCCCTAG 512
| || || || ||| | ||||| | |||| ||||| |||||||||| ||||| |||||
Sbjct 473 -TGTCTTCGGCCGTGCGAATCCTCGA-TTGTCGCAGTAACACTTGGCGCGATGCTCCTAG 530
Query 513 TATGACCGTAGCCCGGAAGAATGCAAT-CATTTATGT-T-TACAATGGGAAAATCTATGT 569
|||||||||||||| |||| || | ||| |||| | ||| |||||||||| || ||
Sbjct 531 CATGACCGTAGCCCGAAAGAG-GCCTTTCAT--ATGTCTCTACGATGGGAAAATTTACGT 587
Query 570 AATGGGAGGGTGTGAAGGA-TTAG-AGGATG--AACCATGGGCTGAGGTATTTGATACAA 625
||| ||||||| || | ||| || | | ||||||||||||||||||| |||| ||
Sbjct 588 AATTGGAGGGTAC-AACAAATTATCAGAAAGCGAACCATGGGCTGAGGTATTCGATATAA 646
Query 626 AGACTCAGACTTGGGAACCCCTTCCTGATCCGGGTACTGAGGTACGTAAGAGTTAC-ATT 684
||||||||||||||||| |||| ||||||||||||||||| ||||||| || || |||
Sbjct 647 AGACTCAGACTTGGGAATGCCTTTCTGATCCGGGTACTGAGATACGTAACTGT-ACCATT 705
Query 685 TTCAGTATCGGAGAGATCGAAGGAAAGATTCAGATTCACTTTGGG-ACTTTA-AAGGAGA 742
| ||| || | ||||||||||||||||||||| | |||||| | | | || | |
Sbjct 706 TACAGAATAGCAGAGATCGAAGGAAAGATTCA----C--TTTGGGTA-TACACAAAAA-A 757
Query 743 TGTATGCTTATGACACGAAGCAATGTAAATGGGAAAACCGTGTAAA-CAAA-TATGCAAC 800
||||||||||||| | |||||| || |||||||| | ||| || | | | ||||
Sbjct 758 CGTATGCTTATGACCCAAAGCAAGGTGAATGGGAATGCTGTG-AAGGCGAGGT-TGCAT- 814
Query 801 GTATGCGAGG-CCAGAATGTATGATTGAGAATGTATCCTTCTCCTTTGCT--TC-CGAGG 856
| | ||||| || ||||| |||| |||| ||||| | | |||||||| | | |
Sbjct 815 -T-TCCGAGGTCCC-AATGTGTGATGGAGAGTGTATTGTACACCTTTGCTAATAACTACA 871
Query 857 GT-GGTATATATCGTCGAGACCAGTTCCGGTGGTATGACaaaaaaaaGGGTTATTGG-AA 914
| || | | || | | | || | ||||| | ||| | || | || || ||
Sbjct 872 CTTGGGAGG-A-CGACTA--CGGGTGCAAGTGGTG-GTCAACGGAT-GGAT-ATGGGGAA 924
Query 915 AGAGGTGAAAGGGTTAGACTCATTACTACAGAGGTACAGCAAGA--A-TGGTGGCTCAAG 971
| |||| |||||||| || ||| || || ||| |||| ||||| | ||||||||||||
Sbjct 925 A-AGGTAAAAGGGTTGGAGTCACTATTAGAGA--TACA-CAAGAGGAATGGTGGCTCAAG 980
Query 972 TCATAATACGACTGAACTAGTTAGC-TGTGGTGGGAAACTCTTACTTATT-TGGGAAGGG 1029
| ||||||||||| |||||||| || ||||||||||||||||||||| || |||||||||
Sbjct 981 TGATAATACGACTAAACTAGTT-GCCTGTGGTGGGAAACTCTTACTT-TTATGGGAAGGG 1038
Query 1030 TATATGAAGCATAATCCCAATGATAGGAAGAAGATTTGGTGCGCGGAAATCGGGATAGAA 1089
|| |||||||||||||||||| |||||||||||||||||||||||| |||| | |||||
Sbjct 1039 TACATGAAGCATAATCCCAATAATAGGAAGAAGATTTGGTGCGCGGTTATCGCGTTAGAA 1098
Query 1090 AATCATGATGGAGATGAGCTTTGGGGGAAT-GTTGAGTGGTTTGATGTTTTGCATACCGT 1148
|| | |||||||| | || ||||||| ||| ||||||||| |||||||| |||||| |||
Sbjct 1099 AAGCGTGATGGAGGTAAGGTTTGGGG-AATTGTTGAGTGGGTTGATGTTGTGCATATCGT 1157
Query 1149 CCCCACATCAT 1159
|||||||||||
Sbjct 1158 CCCCACATCAT 1168
Score = 348 bits (188), Expect = 2e-94
Identities = 249/277 (90%), Gaps = 10/277 (4%)
Strand=Plus/Plus
Query 2069 AAGGGTTAGACTCACTAGAT-GAGATGTACATGAGGAATGGTGGCTCAAGTGGTAATACG 2127
||||||| || |||||| | ||||| ||| |||||||||||||||||||| |||||||
Sbjct 932 AAGGGTTGGAGTCACTA-TTAGAGATACACAAGAGGAATGGTGGCTCAAGTGATAATACG 990
Query 2128 ACTAAACTAGTTAG-CTGTGGTGGGAAACTCTTACTTTTATGGGAAGGGTATATGAAGCA 2186
|||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 991 ACTAAACTAGTT-GCCTGTGGTGGGAAACTCTTACTTTTATGGGAAGGGTACATGAAGCA 1049
Query 2187 TAATCCCAATAATAGGAAGAAGATTTGGTGCGCTGAAATCGC-TATAGAAAAGCGTGATG 2245
||||||||||||||||||||||||||||||||| | ||||| | |||||||||||||||
Sbjct 1050 TAATCCCAATAATAGGAAGAAGATTTGGTGCGCGGTTATCGCGT-TAGAAAAGCGTGATG 1108
Query 2246 GAGGTGGAG-TTTGGGGAATTGTTGAGAGGGTTGAGGTTTTGCATAACGTCCCTATATCA 2304
||||| || ||||||||||||||||| ||||||| ||| |||||| |||||| | ||||
Sbjct 1109 GAGGTA-AGGTTTGGGGAATTGTTGAGTGGGTTGATGTTGTGCATATCGTCCCCACATCA 1167
Query 2305 TGTCA-GCTCTTGCATTGTCTCGTTGTCTCGGTTTGA 2340
|| || |||||||||||||||||||||||||||||||
Sbjct 1168 TG-CAAGCTCTTGCATTGTCTCGTTGTCTCGGTTTGA 1203
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116164061130
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5