BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg329707 Length=2106 Score E Sequences producing significant alignments: (Bits) Value AT4G18290.1 | Symbols: KAT2 | potassium channel in Arabidopsis ... 3262 0.0 AT5G46240.1 | Symbols: KAT1 | potassium channel in Arabidopsis ... 1578 0.0 > AT4G18290.1 | Symbols: KAT2 | potassium channel in Arabidopsis thaliana 2 | chr4:10115418-10118599 FORWARD LENGTH=2216 Length=2216 Score = 3262 bits (1766), Expect = 0.0 Identities = 1984/2090 (95%), Gaps = 12/2090 (1%) Strand=Plus/Plus Query 1 ATGCCAATCTCTAGTACTAGAAACTTCTTCAAACGATTCTGCGTCGAAGAATACAATATG 60 ||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGTCAATCTCTTGTACCAGAAACTTCTTCAAACGATTCTGCGTCGAAGAATACAATATG 60 Query 61 GATACATTCAAACACAGTAGTTTCCTCTCTGCTGATCTCTTACCATCTCTTGGAGCTAGA 120 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GATACATTCAAACATAGCAGTTTCCTCTCTGCTGATCTCTTACCATCTCTTGGAGCTAGA 120 Query 121 ATAAACCAATCAACTAAGCTCCGCAAACACATCATCTCTCCTTTCGATCCACGTTTCAGG 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 121 ATAAACCAATCAACTAAGCTCCGTAAACACATCATCTCTCCTTTCGATCCACGTTTCAGG 180 Query 181 GCATGGGAGATGTGGCTGGTCATTCTTGTGATTTACTCGGCTTGGATTTGTCCTTTTGAG 240 | |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 181 GGATGGGAGATGTGGCTGGTCATTCTTGTGATTTACTCAGCTTGGATTTGTCCATTTGAG 240 Query 241 TTTGCCTTCATCACCTACAAGAAAGACGCGCTTTTCATCATTGACAACATTGTCAATGGC 300 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 241 TTTGCCTTCATCACCTACAAGAAAGACGCACTTTTCATCATTGACAACATTGTCAATGGA 300 Query 301 TTCTTTGCCATTGATATCATTCTCACCTTCTTCGTTGCTTATCTTGACAGCCACTCTTAT 360 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 301 TTCTTTGCCATTGACATCATTCTCACCTTCTTCGTTGCTTATCTAGACAGCCACTCATAT 360 Query 361 CTTCTAGTCGATAAACCTAAGAAAATAGCTATAAGGTACCTTTCTACTTGGTTCGCCTTT 420 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CTTCTAGTCGACAAACCTAAGAAAATAGCTATAAGGTACCTTTCTACTTGGTTCGCCTTT 420 Query 421 GATGTCTGCTCAACAGCTCCATTCCAGTCACTGAGTCTTCTGTTCAATTACAACGGAAGC 480 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 421 GATGTCTGCTCAACAGCTCCATTCCAGTCACTGAGTCTTCTGTTCAAATACAATGGAAGT 480 Query 481 GAAATAGGATTCAGAGTTCTTAGTATGCTCAGGCTCTGGCGTCTTAGACGAGTTAGCTCC 540 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 GAAATAGGATTCAGAGTTCTTAGTATGCTCAGGCTCTGGCGTCTTAGACGAGTTAGCTCG 540 Query 541 CTGTTTGCAAGGCTTGAGAAAGATATCCGCTTCAACTATTTCTGGACACGCTGCACAAAA 600 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 541 CTGTTTGCAAGGCTTGAGAAAGATATCCGCTTCAACTATTTCTGGACACGATGCACAAAA 600 Query 601 CTCATTTCGGTCACACTGTTTGCAGTACATTGTGCTGGATGCTTCAACTACCTCATTGCA 660 ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 601 CTCATTTCGGTGACACTGTTTGCAGTACATTGTGCTGGATGCTTCGCCTACCTCATTGCA 660 Query 661 GATCGATATCCTGATCCAACAAAAACATGGATTGGAGCTGTCTACCCAAATTTCAAGGAG 720 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 GATCAATATCATGATCCAACAAAAACATGGATTGGAGCTGTCTACCCAAATTTCAAGGAG 720 Query 721 ACAAGCGTATGGAGTAGATATGTTACTGCTCTTTACTGGTCAATTACGACATTAACAACT 780 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 721 ACAAGCGTATGGAGTAGATATGTTACTGCTCTTTACTGGTCTATTACGACATTAACAACA 780 Query 781 ACAGGTTATGGAGACTTACATGCCGAGAATCCAAGAGAAATGTTGTTCTTTGTGTTTTTC 840 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 781 ACAGGTTATGGAGACTTACATGCTGAGAACCCAAGAGAAATGTTGTTCTTTGTGTTTTTC 840 Query 841 ATGCTCTTCAACCTGGGTTTTACATCTTACCTGATTGGAAATATGACCAACCTTGTGGTT 900 |||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||| Sbjct 841 ATGCTCTTCAACCTCGGTTTCACATCTTACCTCATAGGAAATATGACCAACCTTGTGGTT 900 Query 901 CACTGGACTAGCCGCACCAGAAACTTTAGAGATACTGTAAGAGTTGCTTCGGAGTTTGCA 960 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct 901 CACTGGACTAGCCGCACCAGAAACTTTAGAGATACTGTAAGAGCTGCTTCAGAGTTTGCA 960 Query 961 TCAAGAAACCAACTTCCACCAAACATACAAGACCAAATGTTATCACACATTTGCTTAAAG 1020 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 TCAAGAAACCAACTCCCACCAAACATACAAGACCAAATGTTATCACACATTTGCTTAAAG 1020 Query 1021 TTCAAAACAGAGGGTCTGAAACAACAAGAAACCTTGAACGGTTTGCCGAAAGCAATTCGG 1080 || ||||||||||||||||||||||||||| | || || ||||||||||||||||| ||| Sbjct 1021 TTTAAAACAGAGGGTCTGAAACAACAAGAAGCTTTAAATGGTTTGCCGAAAGCAATCCGG 1080 Query 1081 TCAAGCATTGCAAACTATCTCTTCTTCCCAATCGTTCAGAACGTCTACCTCTTTCAGGGA 1140 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 1081 TCAAGCATTGCAAACTATCTCTTCTTCCCAATCGTTCAGAACGTCTACCTATTTCACGGA 1140 Query 1141 GTTTCTCACAACTTCCTATTTCAGTTGGTTTCAGATATAGACGCCGAATATTTCCCACCA 1200 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 GTTTCTCGCAACTTCCTATTTCAGTTGGTTTCAGATATAGACGCCGAATATTTCCCACCA 1200 Query 1201 AGAGAAGATGTAATACTACAGAACGAAGCTCCTACTGACCTTTACGTTCTAGTCTCAGGG 1260 ||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| Sbjct 1201 AGAGAAGATGTAATACTACAGAACGAAGCTCCTACTGACCTCTACATCCTAGTCTCAGGG 1260 Query 1261 GCAGTGGATTTTACTGTCTATGTTGGCGAAGAAGATCAGGTTCAAGGCAAGGCGGTTGTT 1320 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1261 GCAGTGGATTTTACTGTCTACGTTGGCGAAGAAGATCAGGTTCAAGGCAAGGCGGTTGTT 1320 Query 1321 GGCGATGCATTTGGAGAGATTGGTGTGTTATGCTATACACCACAACCTTTCACAGTTAGG 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1321 GGCGATGCATTTGGAGAGATTGGTGTGTTATGCTATACACCACAACCTTTCACAGTTAGG 1380 Query 1381 ACAACTGAACTTTCTCAGATACTACGCATAAGCAAGAAATCTCTAATGAGTGCTATGCGA 1440 ||||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 1381 ACAACAGAACTATCTCAGATACTACGGATAAGCAAAAAATCTCTAATGAGTGCTATGCGA 1440 Query 1441 GCTCATATCGAAGATGGACGTGTCATAATGAACAACCTCTTCATGAAACTTAGAGGGCAA 1500 |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1441 GCTCATGTCGAAGATGGACGAGTCATAATGAACAACCTCTTCATGAAACTTAGAGGGCAA 1500 Query 1501 CAGTCAATAGCAATTGATGATCCAAATACAGAAGCAGACTCACTTCTCCAGGAGTGGCTT 1560 || |||||||||||||||||||||||| ||||| |||| ||||||||| ||||||||||| Sbjct 1501 CAATCAATAGCAATTGATGATCCAAATTCAGAACCAGAGTCACTTCTCAAGGAGTGGCTT 1560 Query 1561 GGTGGTGATCCAAAGACAGAAGAAGGAAACACAAGTGATCAAGGACA-GGGACACAAATA 1619 | ||||| | ||||||||| |||||||||| | |||||||||||||| ||| |||||||| Sbjct 1561 GTTGGTGGTTCAAAGACAGGAGAAGGAAACGCTAGTGATCAAGGACATGGG-CACAAATA 1619 Query 1620 TTTACAACTGCATGATACAAAAAATATTGATATGGGGTCAACTGAATGGAGGGATTCAAG 1679 |||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct 1620 TTTACAACTGCATGATTCAGAAAATATTGATATGGGGTCAACTGAATGGAGAGATTCAAG 1679 Query 1680 A---TCTGGTTACGGTGAAACGAAAAGAGCTCTAGTACATAGGATAGAGATAGAAGAAGG 1736 | |||||||| || ||||||||||||| || || ||||| |||||||||||||||||| Sbjct 1680 AAGATCTGGTTATGGCGAAACGAAAAGAGTTCGAGAACATACGATAGAGATAGAAGAAGG 1739 Query 1737 -GTTAAAACCAAAGAAAGAATTTGATGGAAAGGGTTGCTCTAATGCAGATCTTACCTCAT 1795 | ||||||||| ||||| ||||||||||| ||||||||| |||||||||||||||||| Sbjct 1740 AGA-AAAACCAAATAAAGAGTTTGATGGAAAAGGTTGCTCTGATGCAGATCTTACCTCAT 1798 Query 1796 TTGAATTTCATTCACAGGAAGCATATCCATATTGCAGATCAAACATCCAAATCAAACAAC 1855 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1799 TTGAATTTCATTCACAGGAAGCATATCCATATTGCAGATCAAACATCCAAATCAAACAAC 1858 Query 1856 ATGAAGCTGTAAAACCAAAAGATAAGAGACTCACCATCCACTTGAAGTCTCGGGAAAAAG 1915 ||||||||| ||||||||||||||| ||| | ||||||||||||||||| ||||| |||| Sbjct 1859 ATGAAGCTGCAAAACCAAAAGATAAAAGAGTTACCATCCACTTGAAGTCCCGGGACAAAG 1918 Query 1916 ATTTGTCGAAGCTGATAGTACTTCCTGCTTCCATAGAAGAGCTGCTAAAACTTGCAGGTG 1975 ||||||||||||||||| | ||||||||||||||||||||| |||||| ||||||||||| Sbjct 1919 ATTTGTCGAAGCTGATAATCCTTCCTGCTTCCATAGAAGAGTTGCTAAGACTTGCAGGTG 1978 Query 1976 ACAAATTTGGATACAAAAGCTTCACAAAGGTCAAGAATGCGGAAAACGCAGAAATAGATG 2035 | ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct 1979 AAAAATTTGGATACA---GCTTCACAAAGGTCACGAATGCGGAAAACGCAGAAATAGATG 2035 Query 2036 ATGTAGATGTGATTAGAGATGGTGATCATTTGTATTTT-TGCATCAATGA 2084 ||| ||||||||||||||||||||||||||||||| || | ||||||||| Sbjct 2036 ATGAAGATGTGATTAGAGATGGTGATCATTTGTATATTCT-CATCAATGA 2084 > AT5G46240.1 | Symbols: KAT1 | potassium channel in Arabidopsis thaliana 1 | chr5:18743566-18746730 REVERSE LENGTH=2289 Length=2289 Score = 1578 bits (854), Expect = 0.0 Identities = 1318/1541 (86%), Gaps = 36/1541 (2%) Strand=Plus/Plus Query 7 ATCTCTAGTACTAGAAACTTCTTC-AAACGATTCTGCGTCGAAGAATACAATATGGATA- 64 |||||| | ||| |||| |||||| ||| ||||||||||||| ||||||||||| || | Sbjct 176 ATCTCTTGGACTCGAAATTTCTTCGAAA-GATTCTGCGTCGAGGAATACAATATAGACAC 234 Query 65 CATTCAAACACAGTAGTTTCCTCTCTGCTGATC-TCTTACCATCTCTTGGAGCTAGAATA 123 || | ||||| ||||||||||||||||| |||| || |||||||||||||||| || || Sbjct 235 CA-TAAAACAGAGTAGTTTCCTCTCTGCCGATCTTC-TACCATCTCTTGGAGCCAGGATC 292 Query 124 AACCAATCAACTAAGCTCCGCAAACACATCATCTCTCCTTTCGATCCACGTTTCAGGGCA 183 |||||||| |||||||||||||||||||| ||||||||||| ||||||||| ||| || Sbjct 293 AACCAATCTACTAAGCTCCGCAAACACATAATCTCTCCTTTTAATCCACGTTACAGAGCG 352 Query 184 TGGGAGATGTGGCTGGTCATT-CTTGTGATTTACTCGGCTTGGATTTGTCCTTTTGAGTT 242 |||||||||||||| || ||| || || |||||||| ||||||||||| || ||| | || Sbjct 353 TGGGAGATGTGGCTAGT-ATTACTAGTTATTTACTCAGCTTGGATTTGCCCATTTCAATT 411 Query 243 TGCCTTCATCACCTACAAGAAAGACGCGCTTTTCATCATTGACAACATTGTCAATGGCTT 302 ||| ||||||||||| || ||||||||| |||||||||| ||||||||||| |||||||| Sbjct 412 TGCTTTCATCACCTATAAAAAAGACGCGATTTTCATCATCGACAACATTGTTAATGGCTT 471 Query 303 CTTTGCCATTGATATCATTCTCACCTTCTTCGTTGCTTATCTTGACAGCCACTCTTATCT 362 ||| ||||||||||| ||||||||||||||||| |||||||| || |||||||| ||||| Sbjct 472 CTTCGCCATTGATATTATTCTCACCTTCTTCGTCGCTTATCTCGATAGCCACTCCTATCT 531 Query 363 TCTAGTCGATAAACCTAAGAAAATAGCTATAAGGTACCTTTCTACTTGGTTCGCCTTT-G 421 |||||| || | |||||||||||||| |||||||||||||| || ||||||| |||| | Sbjct 532 TCTAGTTGACAGTCCTAAGAAAATAGCAATAAGGTACCTTTCGACGTGGTTCG-CTTTCG 590 Query 422 ATGTCTGCTCAACAGCTCCATTCCAGTCACTGAGTCTTC-TGTTCAATTACAACGGAAGC 480 |||| || || ||||| ||||| ||| |||| || | || |||| || |||||||||||| Sbjct 591 ATGTTTGTTCCACAGCACCATTTCAGCCACTAAG-CCTCTTGTTTAACTACAACGGAAGC 649 Query 481 GAAATAGGATTCAGAGTTCTTAGTATGCTCAGGCTCTGGCGTCTTAGACGAGTTAGCTCC 540 ||| ||||||||||| ||||||| ||||||||| | |||||||| | ||||||||||| Sbjct 650 GAACTAGGATTCAGAATTCTTAGCATGCTCAGGTTATGGCGTCTCCGGCGAGTTAGCTCG 709 Query 541 CTGTTTGCAAGGCTTGAGAAAGATATCCGCTTCAACTATTTCTGGACACGCTGCACAAAA 600 || |||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||| Sbjct 710 CTATTTGCAAGGCTTGAGAAAGATATCCGTTTCAACTATTTCTGGATACGTTGCACAAAA 769 Query 601 CTCATTTCGGTCACACTGTTTGC-AGTACATTGTGCTGGATGCTTCAACTACCTCATTGC 659 |||||||||||||| |||| || | |||||||||||||||| ||||||||||| ||||| Sbjct 770 CTCATTTCGGTCACTTTGTTCGCTA-TACATTGTGCTGGATGTTTCAACTACCTGATTGC 828 Query 660 AGATCGATATCCTGATCCAACAAAAACATGGATTGGAGCTGTCTACCCAAATTTC-AAGG 718 |||| |||||||| |||||| ||| ||||||||||||||||| || ||||||||| ||| Sbjct 829 AGATAGATATCCTAATCCAAGAAAGACATGGATTGGAGCTGTGTATCCAAATTTCAAAGA 888 Query 719 AGACAAG-CGTATGGAGTAGATATGTTACTGCTCTTTACTGGTCAATTACGACATTAACA 777 || |||| | |||||| ||||||||| ||||||||||||||||| |||||||||||||| Sbjct 889 AG-CAAGTC-TATGGAATAGATATGTGACTGCTCTTTACTGGTCCATTACGACATTAACG 946 Query 778 ACTACAGGTTATGGAGACTTACATGCCGAGAATCCAAGAGAAATGTTGTTCTTTG---TG 834 || || || |||||||| || ||||| ||||| |||||||||||| || |||| | Sbjct 947 ACCACGGGATATGGAGATTTTCATGCTGAGAACCCAAGAGAAATG--CTT-TTTGACAT- 1002 Query 835 TTT-TTCATGCTCTTCAACCTGGGTTTTACATCTTACCTGATTGGAAATATGACCAACCT 893 ||| |||||| | |||||||| ||||| ||| ||||||| |||||||||||||||||||| Sbjct 1003 TTTCTTCATGATGTTCAACCTCGGTTTGACAGCTTACCTCATTGGAAATATGACCAACCT 1062 Query 894 TGTGGTTCACTGGACTAGCCGCACCAGAAACTTTAGAGATACTGTAAGAGTTGCTTCGGA 953 || ||||| ||||||||||| ||||||| |||||| ||| | || |||| |||||| || Sbjct 1063 CGTCGTTCATTGGACTAGCCGAACCAGAACCTTTAGGGATTCAGTGAGAGCTGCTTCAGA 1122 Query 954 GTTTGCATCAAGAAACCAACTTCCACCA-AACATACAAGACCAAATGTTATCACACATTT 1012 |||||| |||||||| ||||| ||| || |||||||||| ||||||||||||||||||| Sbjct 1123 GTTTGCTTCAAGAAATCAACTCCCA-CATGACATACAAGATCAAATGTTATCACACATTT 1181 Query 1013 GCTTAAAGTTCAAAACAGAGGGTCT-GAAACAACAAGAAACCTTGAACGGTTTGCCGAAA 1071 |||||||||||||||||||||| || |||||||||||| ||||||||| | |||| ||| Sbjct 1182 GCTTAAAGTTCAAAACAGAGGG-CTTGAAACAACAAGAGACCTTGAACAATCTGCCAAAA 1240 Query 1072 GCAATTCGGTCAAGCATTGCAAACTATCTCTTCTTCCCAATCGTTCAGAACGTCTACCTC 1131 ||||| ||||||||||||||||||||| | |||||||| || ||||| ||| | |||||| Sbjct 1241 GCAATCCGGTCAAGCATTGCAAACTATTTATTCTTCCCCATTGTTCACAACATTTACCTC 1300 Query 1132 TTTCAGGGAGTTTCTCACAACTTCCTATTTCAGTTGGTTTCAGATATAGACGCCGAATAT 1191 ||||| |||||||||| |||||||| ||||| |||||||||||||||||||| || ||| Sbjct 1301 TTTCAAGGAGTTTCTCGTAACTTCCTCTTTCAATTGGTTTCAGATATAGACGCTGAGTAT 1360 Query 1192 TTCCCACCAAGAGAAGATGTAATACTACAGAACGAAGCTCCTACTGACCTTTACGTTCTA 1251 |||||||||| ||||||| |||| ||||| ||||||||||||||||| |||||| |||| Sbjct 1361 TTCCCACCAAAAGAAGATATAATTCTACAAAACGAAGCTCCTACTGATCTTTACATTCTG 1420 Query 1252 GTCTCAGGGGCAGTGGATTTTACTGTCTATGTTGGCGAAGAAGATCAGGTTCAAGGCAAG 1311 || ||||| |||||||| || |||||||| |||| | | | |||||| ||||||| || Sbjct 1421 GTGTCAGGAGCAGTGGACTTCACTGTCTACGTTGATGGACATGATCAGTTTCAAGGGAAA 1480 Query 1312 GCGGTTGTTGGCGATGCATTTGGAGAGATTGGTGTGTTATGCTATACACCACAACCTTTC 1371 || || |||| || ||||||||||| |||| || |||| ||||| ||||||||| ||| Sbjct 1481 GCAGTAATTGGAGAAACATTTGGAGAGGTTGGAGTTTTATACTATAGACCACAACCATTC 1540 Query 1372 ACAGTTAGGACAACTGAACTTTCTCAGATACTACGCATAAGCAAGAA-ATCTCTAATGAG 1430 ||||| || ||||| || || ||||| ||||| || ||||||| ||| ||| || ||||| Sbjct 1541 ACAGTAAGAACAACCGAGCTATCTCAAATACTGCGGATAAGCA-GAACATCGCTGATGAG 1599 Query 1431 TGCTATGCGA-GCTCATA-TCGAAGATGGACGTGTCATAATGAACAACCTCTTCATGAAA 1488 ||| |||| | |||||| | || |||||||| ||||| |||||||| |||||||||||| Sbjct 1600 TGCGATGC-ATGCTCATGCT-GACGATGGACGAGTCATCATGAACAATCTCTTCATGAAA 1657 Query 1489 CTTAGAGGGCAACAGTCAATAGCAATTGATGATCCAAATAC 1529 |||||||||||||||||||||||||| |||||| | ||||| Sbjct 1658 CTTAGAGGGCAACAGTCAATAGCAATAGATGATTCGAATAC 1698 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 104417133600 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5