BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg329973
Length=2847
Score E
Sequences producing significant alignments: (Bits) Value
AT4G15415.2 | Symbols: ATB' GAMMA | Protein phosphatase 2A regu... 2279 0.0
AT4G15410.1 | Symbols: PUX5 | serine/threonine protein phosphat... 1869 0.0
AT3G21650.1 | Symbols: | Protein phosphatase 2A regulatory B s... 1288 0.0
> AT4G15415.2 | Symbols: ATB' GAMMA | Protein phosphatase 2A regulatory
B subunit family protein | chr4:8817031-8819693 FORWARD
LENGTH=2456
Length=2456
Score = 2279 bits (1234), Expect = 0.0
Identities = 1371/1439 (95%), Gaps = 2/1439 (0%)
Strand=Plus/Plus
Query 1410 GCCTACATCGAAATCGTCAGCATCGAATTCGAATGGAGCAAATGGGACTGTTATTGCTCC 1469
|||| | |||||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct 675 GCCTTCTTCGAAATCATCCGCATCGAATTCGAATGGAGCAAATGGAACTGTTATTGCTCC 734
Query 1470 TTCCTCAACAAGTTCTAACAGAACGAATCAAGTCAATGGGGTTTATGAAGCATTGCCAAA 1529
||| ||||| || ||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 735 TTCTTCAACGAGCTCTAACAGAACCAATCAAGTCAATGGAGTTTATGAAGCATTGCCAAG 794
Query 1530 CTTTAGGGATGTTCCTAGCTCGGAGAAACCTAATCTGTTTATCAAGAAGTTGAGTTTGTG 1589
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct 795 CTTTAGAGATGTTCCTACCTCGGAGAAACCTAATCTGTTTATCAAGAAGTTGAGTATGTG 854
Query 1590 TTGCGTTGTGTTCGACTTTAGTGATCCGTCCAAGAATCTGAGAGAGAAAGAGATAAAGAG 1649
|||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||
Sbjct 855 TTGCGTTGTGTTCGACTTCAATGATCCGTCGAAGAATCTGAGAGAGAAAGAGATAAAGAG 914
Query 1650 ACAGACTTTGCTGGAGCTTGTTGATTATATTGCAACGGTTTCTACAAAGTTGAGTGATGC 1709
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 915 ACAGACTTTGCTTGAGCTTGTTGATTATATTGCAACGGTTTCTACAAAGTTGAGTGATGC 974
Query 1710 TGCGATGCAAGAGATTGCGAAAGTGGCTGTGGTTAATCTTTTCAGGACGTTTCCTACTGC 1769
||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct 975 TGCAATGCAAGAGATTGCGAAAGTGGCTGTTGTTAATCTTTTCAGGACGTTTCCTTCTGC 1034
Query 1770 GAATCACGAGAGTAAAATTCTTGAAACGCTTGATGTGGATGATGAGGAACCTGCTTTAGA 1829
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1035 GAATCACGAGAGTAAGATTCTCGAAACGCTTGATGTGGATGATGAGGAACCTGCTTTAGA 1094
Query 1830 GCCGGCTTGGCCTCATCTTCAAGTTGTTTATGAGCTTCTTCTCAGATTTGTGGCCTCGCC 1889
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 1095 GCCGGCTTGGCCTCATCTTCAAGTTGTCTATGAGCTTCTTCTTAGATTTGTGGCCTCGCC 1154
Query 1890 TATGACTGATGCGAAGCTTGCAAAGAGATATATCGACCATTC-TTTCGTCTTGAAGCTCT 1948
|||||||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||
Sbjct 1155 TATGACTGATGCAAAGCTTGCAAAGAGATATATTGACCATTCATTT-GTCTTGAAGCTCT 1213
Query 1949 TGGATTTGTTTGACTCTGAAGACCAAAGAGAGAGGGAATATCTAAAGACCATTCTGCATC 2008
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1214 TGGATTTGTTTGACTCTGAAGACCAGAGAGAGAGGGAATATCTAAAGACCATTCTTCATC 1273
Query 2009 GGATATACGGGAAATTCATGGTGCACCGACCCTTTATCAGAAAGGCCATCAACAATATCT 2068
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1274 GGATATACGGGAAATTCATGGTGCACCGACCCTTTATCAGAAAGGCGATCAACAATATCT 1333
Query 2069 TCTACAGATTCATTTTCGAAACTGAAAAGCATAATGGCATTGCAGAGTTGCTTGAGATTC 2128
|||||||||||||||| ||||| ||||||||||| || |||||||||||||||||||| |
Sbjct 1334 TCTACAGATTCATTTTTGAAACCGAAAAGCATAACGGTATTGCAGAGTTGCTTGAGATAC 1393
Query 2129 TAGGAAGTATAATCAACGGTTTCGCTTTGCCGTTAAAAGAGGAGCATAAGCTCTTCCTAA 2188
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1394 TAGGAAGTATAATCAACGGTTTCGCTTTACCGTTAAAAGAAGAGCATAAGCTCTTCCTAA 1453
Query 2189 TCCGGGCCTTGATTCCACTCCACAGACCTAAATGTGCATCTGCCTATCATCAACAGCTAT 2248
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1454 TCCGGGCATTGATTCCACTCCACAGACCTAAATGTGCATCTGCTTATCATCAACAGCTTT 1513
Query 2249 CTTATTGCATTGTTCAATTTGTAGAGAAAGACTTTAAGCTTGCCGATACCGTCATTAGAG 2308
|||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||
Sbjct 1514 CTTATTGCATTGTTCAGTTTGTAGAGAAAGACTTCAAGCTTGCTGATACGGTCATTAGAG 1573
Query 2309 GCCTTCTAAAGTATTGGCCTGTGACTAACAGTTCAAAGGAAGTTATGTTTCTTGGGGAGT 2368
| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 1574 GACTTCTAAAGTATTGGCCTGTGACTAATAGTTCAAAGGAAGTTATGTTTCTTGGAGAGT 1633
Query 2369 TGGAAGAAGTTTTGGAAGCAACTCAAGCAGCTGAGTTTCAGCGATGTATGGTTCCTTTAT 2428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1634 TGGAAGAAGTTTTGGAAGCAACTCAAGCAGCTGAGTTTCAGCGATGTATGGTTCCTTTAT 1693
Query 2429 TCCGTCAAATCGCCCGATGCCTCAACAGTTCACATTTTCAGGTGGCTGAAAGGGCTCTGT 2488
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1694 TTCGTCAAATCGCTAGATGCCTCAACAGTTCACATTTTCAGGTGGCTGAAAGGGCTCTAT 1753
Query 2489 TTCTGTGGAACAACGATCACATAAGAAACCTGATTACTCAAAACCATAAAGTGATAATGC 2548
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1754 TTCTATGGAACAACGATCACATAAGAAACCTGATTACTCAAAACCATAAAGTGATAATGC 1813
Query 2549 CAATCGTGTTCCCGGCTATGGAGAGAAACACACGGGGCCATTGGAACCAAGCAGTTCAGA 2608
| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1814 CCATTGTGTTCCCGGCTATGGAGAGAAACACACGGGGGCATTGGAACCAAGCAGTTCAGA 1873
Query 2609 GTCTGACTTTGAATGTGAGAAAGGTATTGGCAGAGACAGACCAAATTCTGTTTGATGAAT 2668
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1874 GTCTGACTTTGAATGTGAGAAAGGTAATGGCAGAGACAGACCAAATTCTGTTTGATGAAT 1933
Query 2669 GCTTAGCCAAGTTCCAAGAAGATGAAGCAAATGAAAACGAGGTTGTAGCCAAACGAGAAG 2728
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 1934 GCTTAGCCAAGTTCCAAGAAGATGAAGCGAATGAAACCGAGGTTGTAGCCAAACGAGAAG 1993
Query 2729 CAACATGGAAGCTTTTGGAAGACTTGGCAGCTTCCAAATCCGTAAGCAACGAGGCAGTGC 2788
|||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||
Sbjct 1994 CAACATGGAAGCTTTTGGAAGAGTTAGCAGCTTCGAAATCCGTAAGCAACGAGGCAGTGC 2053
Query 2789 TCGTCCCCAGATTCTCATCATCGGTTACTCTTACAACCGGTAAAACTTCGGGTAGTTGA 2847
|||||||| |||| ||||| || ||||||||| ||||||||||||||||||||||||||
Sbjct 2054 TCGTCCCCCGATTTTCATCTTCAGTTACTCTTGCAACCGGTAAAACTTCGGGTAGTTGA 2112
> AT4G15410.1 | Symbols: PUX5 | serine/threonine protein phosphatase
2A 55 kDa regulatory subunit B prime gamma | chr4:8814801-8816805
FORWARD LENGTH=1542
Length=1542
Score = 1869 bits (1012), Expect = 0.0
Identities = 1178/1256 (94%), Gaps = 20/1256 (2%)
Strand=Plus/Plus
Query 1 ATGGCGACGGAGATGAACGAGAATCTGATCAACTCTTTCGTAGAGATAACTTCTTCATCA 60
||||||||||||| ||||||||||||||| ||||| ||| | ||||| ||||||||||||
Sbjct 68 ATGGCGACGGAGACGAACGAGAATCTGATAAACTCCTTCATCGAGATCACTTCTTCATCA 127
Query 61 AGAGAAGAAGCTACTTTCTTCCTCGAAAGTCAC-CGTTGGAATCTAGACGCTGCCGTTTC 119
||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 128 AGAGAAGAAGCTAATTTCTTCCTCGAAAGTCACAC-TTGGAATCTAGACGCTGCCGTTTC 186
Query 120 AACTTTCCTCGATAACGATGCCGCCGCAGCCGCAATCGCCGAACCAAACCCTACC-GG-- 176
|||||||||||||||||||||||||||| || ||||||||||||||||||| ||
Sbjct 187 AACTTTCCTCGATAACGATGCCGCCGCA---GC---CGCCGAACCAAACCCTACCGGGCC 240
Query 177 ACCACCA-------C--CGATTGCCGCTGCTCAATCTCCTTCTCAATCTCACTCTCCCGA 227
||||||| | | ||||||| ||| |||||||||||||||||||||||||||||
Sbjct 241 ACCACCACCTTCTTCTACTATTGCCGGTGCACAATCTCCTTCTCAATCTCACTCTCCCGA 300
Query 228 TTACACTCCTTCTGAAACCTCTCCTTCTCCTTCGCGATCACGATCTCCTTCTCCGTCTTC 287
||||||||| |||||||||||||| |||||||| |||||||||||| |||||||||||||
Sbjct 301 TTACACTCCGTCTGAAACCTCTCCCTCTCCTTCCCGATCACGATCTGCTTCTCCGTCTTC 360
Query 288 TCGCGCTGCTCCCTACGGTCTCCGATCGAGAGGCGGTGCTGGAGAGAATAAAGAAAGTGA 347
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 361 TCGCGCTGCTCCCTACGGTCTCCGATCGAGAGGCGGTGCTGGAGAGAATAAAGAAACTGA 420
Query 348 GAATCCGTCTGGTAGTCGGACTTCTAGGAGTCGTCAACACGCTGGGAATATACGTACGTT 407
||||||||| || | ||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 421 GAATCCGTCGGGAATTCGGAGTTCTAGGAGTCGTCAACACGCTGGGAATATCCGTACATT 480
Query 408 CGCCGATCTGAACCGTTCTCCGGCTGATGGTGAGGGCAGTGATTCTGATGAAGCGAATGA 467
|||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct 481 CGCCGATCTGAACCGTTCTCCGGCTGATGGCGAGGGCAGTGATTCGGATGAAGCTAATGA 540
Query 468 GTATTATACTGGTGGACAAAAGAGTGGGATGATGGTACAAGATCCTAAGAAAGCGAAAGA 527
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 541 GTATTATACCGGTGGACAAAAGAGTGGGATGATGGTACAAGATCCTAAGAAAGTGAAAGA 600
Query 528 CGTTGATGCACTTTTTGATCAAGCTAGGCAATCAGCTGTAGACAGACCTGTTGAATCATC 587
||||||| ||||||||| ||||||||||| |||||||||||||||||||||||| ||||
Sbjct 601 TGTTGATGAACTTTTTGACCAAGCTAGGCAGTCAGCTGTAGACAGACCTGTTGAACCATC 660
Query 588 AAGAGCACCTTCTACAAGCTTCACTGGAGCTGCACGATTGTTGTCTGGTGAAGCTGTTTC 647
|||| || ||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 661 AAGATCAGCTTCTACAAGCTTCACTGGAGCTGCGCGTTTGTTGTCTGGTGAAGCTGTTTC 720
Query 648 GTCTTCTCCTCAGCAACAACAGCAAGAGCAGCCTCAAAGGATTATGCACACCATCACTTT 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 GTCTTCTCCTCAGCAACAACAGCAAGAGCAGCCTCAAAGGATTATGCACACCATCACTTT 780
Query 708 CTGGTTGAATGGTTTCACTGTTGATGATGGTCCGTTAAGGGGGTTTACTGACCCTGAAAA 767
|||||||||||||||||||||| |||||||||||||||| ||||| | ||||||||||||
Sbjct 781 CTGGTTGAATGGTTTCACTGTTAATGATGGTCCGTTAAGAGGGTTCAGTGACCCTGAAAA 840
Query 768 CGCAGCTTTTATGAATAGCATCTCAAGGTCAGAGTGCCCCAGCGAACTCGAACCAGCAGA 827
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 CGCAGCCTTTATGAATAGCATCTCAAGGTCAGAGTGCCCCAGCGAACTCGAACCAGCAGA 900
Query 828 TAGGAAGATCCCAGTTCATGTCGACCTTGTCAGGCGTGGAGAAAATTTCACCGAACCACC 887
|| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 901 TAAGAAGATCCCTGTTCATGTCGATCTGGTCAGGCGTGGAGAAAATTTCACCGAACCACC 960
Query 888 AAAGCCCAAAAACCCATTCCAAGGTGTAGGAAGAACCCTAGGAGCCAGCGGATCCGGTTC 947
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 961 AAAGCCTAAAAATCCATTCCAAGGTGTAGGAAGAACCCTAGGAGCCAGCGGATCTGGTTC 1020
Query 948 AAATTCAGCACCACCAGCTTCATCCGCCCCAATGAACGCAGCACCAGCACCATCAAGAGG 1007
|| ||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 1021 AAGTTCAGCACCACAAGCTTCATCTGCCCCAATGAACGTAGCACCAGCACCATCAAGAGG 1080
Query 1008 GCTAGTTGTAGATCCAGCAGCACCGACAACCTCTATCCAGCTCAGATTAGCAGACGGAAC 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 GCTAGTTGTAGATCCAGCAGCACCGACAACCTCTATCCAGCTCAGATTAGCAGACGGAAC 1140
Query 1068 ACGCCTTGTCTCCAGGTTCAACAACCACCACACCGTCAGAGACGTACGTGGGTTCATCGA 1127
||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||
Sbjct 1141 ACGCCTTGTCTCCAGGTTCAACAACCACCACACTGTCAGAGATGTACGTGGGTTTATCGA 1200
Query 1128 CGCTTCAAGACCCGGTGGCTCCAAAGAGTACCAGTTACTAACCATGGGGTTCCCTCCTAA 1187
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1201 CGCTTCTAGACCCGGTGGCTCCAAAGAGTACCAGTTGCTAACCATGGGGTTCCCTCCTAA 1260
Query 1188 ACAATTGACAGACTTGGACCAAACCATCGAGCAAGCTGGTATTGCTAATGCCGTCG 1243
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1261 ACAATTGACAGAATTGGACCAAACCATCGAGCAAGCTGGTATAGCTAATGCCGTCG 1316
> AT3G21650.1 | Symbols: | Protein phosphatase 2A regulatory B
subunit family protein | chr3:7621569-7624076 REVERSE LENGTH=2338
Length=2338
Score = 1288 bits (697), Expect = 0.0
Identities = 1116/1316 (85%), Gaps = 37/1316 (3%)
Strand=Plus/Plus
Query 1506 TGGGGTTTATGAAGCATTGCCAAACTTTAGGGATGTTCCTAGCTCGGAGAAACCTAATCT 1565
|||||||||||| || ||||| | |||||| |||||||||| ||||||||||| |||||
Sbjct 877 TGGGGTTTATGAGGCTTTGCCTAGCTTTAGAGATGTTCCTATATCGGAGAAACCGAATCT 936
Query 1566 GTTTATCAAGAAGTTGAGTTTGTGTTGCGTTGTGTTCGACTTTAGTGATCCGTCCAAGAA 1625
|||||| |||||||||| |||| || ||||| || ||||||||||||||||| |||||
Sbjct 937 CTTTATCGGGAAGTTGAGTATGTGCTGTGTTGTTTTTGACTTTAGTGATCCGTCTAAGAA 996
Query 1626 TC-TGAGAGAGAAAGAGATAAAGAGACAGACTTTGCTGGAGCTTGTTGATTATATTGCAA 1684
| | || ||||||||||| ||||| ||||| ||||| ||||||||||||||| |||||
Sbjct 997 CCTTAAG-GAGAAAGAGATTAAGAGGCAGACATTGCTTGAGCTTGTTGATTATGTTGCAT 1055
Query 1685 CGGTTTCTACAAAGTTGAGTGATGCTGCGATGCAAGAGATT-GCGAAAG-TGGCT-GTGG 1741
| ||| | ||||| | |||| | ||||||||||| || || ||| ||| | | ||
Sbjct 1056 CAGTTGGTTTTAAGTTTAACGATGTTTCGATGCAAGAG-TTAACG-AAGATGG-TAGCGG 1112
Query 1742 TTAATCT-TTTCAGGACGTTTCCTACTGCGAATCACGAGAGTAAAATTCTTGAAACGCTT 1800
||||||| ||| || || |||||| |||||||||||||||||||||||||||||| | |
Sbjct 1113 TTAATCTGTTT-AGAACTTTTCCTTCTGCGAATCACGAGAGTAAAATTCTTGAAATACAT 1171
Query 1801 GATGTGGATGATGAGGAACCTGCTTTAGAGCCGGCTTGGCCTCATCTTCAAGTTGTTTAT 1860
||| |||||||||| |||||| |||| ||||| |||||||||||| |||||||||| |||
Sbjct 1172 GATATGGATGATGAAGAACCTTCTTTGGAGCCAGCTTGGCCTCATGTTCAAGTTGTGTAT 1231
Query 1861 GAGCTTCTTCTCAGATTTGTGGCCTCGCCTATGACTGATGCGAAGCTTGCAAAGAGATAT 1920
||| ||||||||||||| ||||| || || ||||||||||| |||||||| |||||||||
Sbjct 1232 GAGATTCTTCTCAGATTCGTGGCTTCTCCCATGACTGATGCAAAGCTTGCCAAGAGATAT 1291
Query 1921 ATCGACCATTCTTTCGTCTTGAAGCTCTTGGATTTGTTTGACTCTGAAGACCAAAGAGAG 1980
|| ||||||||||| |||||||||||||| || |||||||| |||||||| |||||||||
Sbjct 1292 ATTGACCATTCTTTTGTCTTGAAGCTCTTAGACTTGTTTGATTCTGAAGATCAAAGAGAG 1351
Query 1981 AGGGAATATCTAAAGACCATTCTGCATCGGATATACGGGAAATTCATGGTGCACCGACCC 2040
|||||||||||||| || |||||||||||| | |||||||| ||||||||||| |||||
Sbjct 1352 AGGGAATATCTAAAAACTATTCTGCATCGGGTGTACGGGAAGTTCATGGTGCATCGACC- 1410
Query 2041 TTT-ATCAGAAAGGCCATCAACAATATCTTCTACAGATTCATTTTCGAAACTGAAAAGCA 2099
|| ||||||||||| || ||||||||||||||||||||||| | ||| |||||||||||
Sbjct 1411 TTACATCAGAAAGGCGATAAACAATATCTTCTACAGATTCATATCCGAGACTGAAAAGCA 1470
Query 2100 TAATGGCATTGCAGAGTTGCTTGAGATTCTAGGAAGTATAATCAACGGTTTCGCTTTGCC 2159
|||||||||||| |||||||| |||||||| ||||||||||| || ||||| ||||||||
Sbjct 1471 TAATGGCATTGCGGAGTTGCTAGAGATTCTTGGAAGTATAATTAATGGTTTTGCTTTGCC 1530
Query 2160 GTTAAAAGAGGAGCATAAGCTCTTCCTAATCCGGGCCTTGATTCCACTCCACA-GACCTA 2218
|||||||| ||||| ||||||||||| | || ||||||||||| ||||||| | ||||
Sbjct 1531 TTTAAAAGAAGAGCACAAGCTCTTCCTTTTGCGAGCCTTGATTCCTCTCCACAAG-CCTA 1589
Query 2219 AATGTGCATCTGCCTATCATCAACAGCTATCTTATTGCATTGTTCAATTTGTAGAGAAAG 2278
||||| |||| | |||||| |||||||| || |||||||||||||| |||||||| ||||
Sbjct 1590 AATGTTCATCAGTCTATCACCAACAGCTTTCGTATTGCATTGTTCAGTTTGTAGA-AAAG 1648
Query 2279 -ACTTTAAGCTTGCCGATACCGTCATTAGAGGCCTTCTAAAGTATTGGCCTGTGACTAAC 2337
|||| ||||| || |||||||| |||||||| ||| |||| ||||||||||||||||||
Sbjct 1649 GACTTCAAGCTCGCTGATACCGTTATTAGAGGTCTTTTAAAATATTGGCCTGTGACTAAC 1708
Query 2338 AGTTCAAAGGAAGTTATGTTTCTTGGGGAGTTGGAAGAAGTTTTGGAAGCAACTCAAGCA 2397
|| ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||
Sbjct 1709 AGCTCAAAGGAAGTTATGTTTCTTGGAGAGTTAGAAGAAGTCTTGGAAGCAACTCAAGCC 1768
Query 2398 GCTGAGTTTCAGCGATGTATGGTTCCTTTATTCCGTCAAATCGCCCGATGCCTCAACAGT 2457
||||||||||| || ||||||||||| |||| ||| ||||| || |||||||||||||||
Sbjct 1769 GCTGAGTTTCAACGTTGTATGGTTCCATTATCCCGACAAATTGCTCGATGCCTCAACAGT 1828
Query 2458 TCACATTTTCAGGTGGCTGAAAGGGC-TCTGTTTCTGTGGAACAACGATCACATAAGAAA 2516
|||||||| ||||| |||||||| || | ||||||| |||||||||||||||||||||||
Sbjct 1829 TCACATTTCCAGGTTGCTGAAAGAGCAT-TGTTTCTATGGAACAACGATCACATAAGAAA 1887
Query 2517 CCTGATTACTCAAAACCATAAAGTGATAATGCCAATCGTGTTCCCGGCTATGGAGAGAAA 2576
|||||| ||||| |||||||||||||||||||| || || ||||| ||| | ||||||||
Sbjct 1888 CCTGATCACTCAGAACCATAAAGTGATAATGCCTATAGTCTTCCCAGCTCTTGAGAGAAA 1947
Query 2577 CACACGGGGCCATTGGAACCAAGCAGTTCAGAGTCTGACTTTGAATGTGAG-AAAGGTAT 2635
||| || || |||||||||||||||||||| ||||||||| | || ||||| |||| |||
Sbjct 1948 CACGCGTGGACATTGGAACCAAGCAGTTCAAAGTCTGACTATAAACGTGAGGAAAG-TAT 2006
Query 2636 TG-GCAGAGACAGACCAAATTCTGTTT-GATGAATGCTTAGCCAAGTTCCAAGAAGATGA 2693
| || |||| |||||| |||| ||| || || || |||||||| ||||||| ||| ||
Sbjct 2007 TATGC-GAGATTGACCAAGTTCT-TTTCGACGAGTGTTTAGCCAAATTCCAAGTAGAAGA 2064
Query 2694 AGCAAATGAAAAC-GAGGTTGTAGCCAAACGAGAA-GCAACATGG-AAGCTTTTGGAAGA 2750
|| ||| ||||| |||||| ||| ||||| ||| | | ||||| || | || |||||
Sbjct 2065 AGTGAAT-AAAACAGAGGTTAAAGCGAAACGGGAAAGGA-CATGGCAA-CGGTTAGAAGA 2121
Query 2751 CTTGGC-AGCTTCCAA-ATCCGT---AAGCAACGAGGCAGTGCTCGTCCCCAGATT 2801
|| || | |||| || | |||| || |||||||||||| || || || |||||
Sbjct 2122 TTTAGCTA-CTTCAAAGA-CCGTTGTAACCAACGAGGCAGTACTGGTTCCAAGATT 2175
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 141470779260
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5