BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg330001
Length=1206
Score E
Sequences producing significant alignments: (Bits) Value
AT4G15053.1 | Symbols: | Protein of Unknown Function (DUF239) ... 1648 0.0
AT1G10190.1 | Symbols: | Protein of Unknown Function (DUF239) ... 937 0.0
AT4G15050.1 | Symbols: | Protein of Unknown Function (DUF239) ... 898 0.0
AT4G15056.1 | Symbols: | FUNCTIONS IN: molecular_function unkn... 494 1e-138
> AT4G15053.1 | Symbols: | Protein of Unknown Function (DUF239)
| chr4:8591930-8593834 REVERSE LENGTH=1246
Length=1246
Score = 1648 bits (892), Expect = 0.0
Identities = 1111/1216 (91%), Gaps = 18/1216 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGTGAGAGGCCCAGTGATATGGATGTTCTTAA--TG-TG--TA-TTGGTCACATA 54
||||||||||||||||||||||||||||||||||||| || || || |||||||| ||
Sbjct 35 ATGGAAGTGAGAGGCCCAGTGATATGGATGTTCTTAATGTGTTGCATATTTGGTCACTTA 94
Query 55 ATTGTAAGTCATAACAATGACTTCGTGGAAGCCAAGAGCTTTTCTAAATCTGAAGATTTA 114
|||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct 95 ATTGTAAGTCATAAGAATGACTTAGTGGAAGCCAAAAGCTTTTCAAAATCTGAAGATTTG 154
Query 115 GAAATCGAGAAGAGACTAAAGTCTATCAACAAACCCGCTGTCAAGATCATCAAGACTATA 174
|||||||||||||||||| || |||||||||||||||| ||||||| ||||||||| |||
Sbjct 155 GAAATCGAGAAGAGACTACAGACTATCAACAAACCCGCCGTCAAGAACATCAAGACCATA 214
Query 175 GATGGAGAAAGATACAGATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCATCCTTCT 234
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 215 GATGGAGAAATATACGGATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCATCCTTCT 274
Query 235 ATGAAGAATCATACATACCATTACAAGATGCGTCCAATATGGAAAGGAATCAGAGAAAGA 294
||||||||||| |||||||||||||||||||||| ||| ||||||| ||| ||||||||
Sbjct 275 ATGAAGAATCACACATACCATTACAAGATGCGTCTAATCTGGAAAGAAATGGGAGAAAGA 334
Query 295 AAGACAAACAATACCGGTTTTGGTTACTTATGGGAGAATGGTGTGGGTTGTCCCATTGGT 354
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 335 GAGACAAACAATACTGCTTTTGGTTACTTATGGGAGAATGGTGTGGGTTGTCCCATTGGT 394
Query 355 ACGGTCCCTATTCAAAGAGTCACCAAAGACGATCTTTTGAGATTAGACTCATTTGTTGAT 414
|| |||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 395 ACAGTCCCTATGCAAAGAGTCACCAAAGACGATCTTTTAAGATTAGACTCATTTGGTGAT 454
Query 415 AATCATAAACCCCGTGGTTCTTGGAACACTACCACTTTTAATCTTAATAATCCTT-TTCA 473
|||||||||||| |||||||||||||||||||||||| | ||| ||||||| || ||||
Sbjct 455 AATCATAAACCCTGTGGTTCTTGGAACACTACCACTTATGATCCTAATAATG-TTGTTCA 513
Query 474 TCCCGACCAACATCATTATGCGGTAGCTCGAACGAAGGACATAGGAAGGAGGTTCCATGG 533
| | ||||||||| || ||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 514 TTACAACCAACATCGTTTTGCGGTAGCTCGAACGAAGAACATAGGAAGGAGGTTCAATGG 573
Query 534 AGCAACGATGGGACTTTGTATAACGGCTCCTAAGGTTAAGCCAACCCAATTCAGTAATTC 593
||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 574 AGCAACGATGGAACTTTGTATAACCGCTCCTAAGGTTAAGCCAACCCAATTCAGTGCTTC 633
Query 594 TAGACTTCACATTCAGATGGGAAGGGATTTCCTCCAAGCCGGTTTGACTGTAAATCCAGT 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 634 AAGACTTCACATTCAGATGGGAAGGGATTTCCTCCAAGCCGGTTTGACTGTAAATCCAGT 693
Query 654 ATTGTACAAGGACAAGCAACCTCGGACTTTTGTTTATACATCTGCAAATGGAAAATCATG 713
|||||||||||||||||||||||| |||||||| |||||| | |||||||||| |||||
Sbjct 694 ATTGTACAAGGACAAGCAACCTCGAACTTTTGTCTATACAGATTCAAATGGAAACTCATG 753
Query 714 TTACAATAGCAACTGCAACGTTGGAAT-GATAGCC-ATCCGTCATGAC-TTAACACTTGG 770
|||||||| |||||||||||||||||| | || | || ||||||||| || |||||||
Sbjct 754 TTACAATACCAACTGCAACGTTGGAATAG-TA-CTTATTCGTCATGACATTG-CACTTGG 810
Query 771 TCTGGCATTGCAGCCAGTGTCTACTCGTGGTTCTAGGCCAAGTTACTATACAAAGATCGG 830
| || ||||| ||||||||||||||||||| | |||||| |||||||||||||||||
Sbjct 811 TATGTCATTGGTGCCAGTGTCTACTCGTGGTGATTGGCCAAAATACTATACAAAGATCGG 870
Query 831 TCTAGTCAAAGACAGAAAATCTGGAAATTGGTTGTTGCGAATGGGTGGTAATTATGAGCC 890
||||||||| || |||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct 871 TCTAGTCAAGGAGAGAAAAAATGGAAATTGGTGGTTGCAAATGGGTGGTAATTATGAGCC 930
Query 891 AATAAATATTGGACTTTGGCCAGGGCATAGGTTTCAACAAGGCTTTGGAGATTTTGTCGA 950
| ||||||||||| ||||||| |||||||||||||||||| ||| |||| ||| ||||||
Sbjct 931 AGTAAATATTGGATTTTGGCCGGGGCATAGGTTTCAACAAAGCTATGGAAATTATGTCGA 990
Query 951 GTGGGGTGGAGAAGTGTACAGCGCAT-ATCTGCCGAGTCCTCAAATGGGATATGGATATT 1009
||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||
Sbjct 991 GTGGGGTGGAGAAGTGTACAGGGCATCA-CTGCCGAGTCCTCAAATGGGATATGGATATT 1049
Query 1010 TCCCAATTCAGGATAAAAGTTATGATGCATATATCCAACACATATCCATACTCGACCGTA 1069
| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 1050 TTCCAATTCAGGATAAAAATTATGATGCATATATCCAACACATATCCATACGCGACCGTT 1109
Query 1070 ATTATAACATAGACCGCAATGTGGACTATCTCGAAGACTTTTCGGACAACAATCGAGGCT 1129
||||||||||||||||||||||||||||||||||||||| ||| ||| | ||||||||||
Sbjct 1110 ATTATAACATAGACCGCAATGTGGACTATCTCGAAGACTATTCAGACGATAATCGAGGCT 1169
Query 1130 ATCAAGTGATAGACACCCGAGATCCTAGACATAGCGGC-GGTCACATAATCTTTTATGGT 1188
||||||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||
Sbjct 1170 ATCAAGTGATAGACACCCGAGATCCTATACATAG-GGCCGGTCATATAATCTTTTATGGT 1228
Query 1189 GGTCCGGGAAATATCT 1204
||||| ||||||||||
Sbjct 1229 GGTCCAGGAAATATCT 1244
> AT1G10190.1 | Symbols: | Protein of Unknown Function (DUF239)
| chr1:3343686-3345632 REVERSE LENGTH=1311
Length=1311
Score = 937 bits (507), Expect = 0.0
Identities = 994/1220 (81%), Gaps = 69/1220 (6%)
Strand=Plus/Plus
Query 18 AGTGATATGGATGTTCTTAATGTG-T--A---TTGGTCACATAATTGTAAGTCATAACAA 71
|||||||||||||||||||||||| | | ||||| |||||||| ||| |||||||||
Sbjct 47 AGTGATATGGATGTTCTTAATGTGTTGCATCTTTGGTAACATAATTATAAATCATAACAA 106
Query 72 TGACTTCGTGGAAGCCAAGAGCTTTTCTAAA-TCTGAAGATTTAGAAATCGAGAAGAGAC 130
|||||| || ||||| |||||| |||||||| | ||||||||||||||||||||||||||
Sbjct 107 TGACTTTGTTGAAGCTAAGAGCCTTTCTAAAGT-TGAAGATTTAGAAATCGAGAAGAGAC 165
Query 131 TAAAGTCTATCAACAAACCCGCTGTCAAGATCATCAAGACTATAGATGGAGAAAGATACA 190
||| | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct 166 TAAGGACTATCAACAAACCTGCTGTCAAGATCATCAAGAGTATAGATGGAGAAAGATACG 225
Query 191 GATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCATCCTTCTATGAAGAATCATACAT 250
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||
Sbjct 226 GATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCACCCTTCAATGAAGAATCACACAT 285
Query 251 ACCATTACAAGATGCGTCCAATATGGAAAGGAATCAGAGAAAGAAAGACAAACAATACCG 310
|||||||||||||||| |||||||||||| |||| ||||||||||||||||| ||||||
Sbjct 286 ACCATTACAAGATGCGCCCAATATGGAAAAGAATGAGAGAAAGAAAGACAAATAATACCA 345
Query 311 GTTTTGGTTACTTATGGGAGAATGGTGTGGGTTGTCCCATTGGTACGGTCCCTATTCAAA 370
|||||||||| |||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct 346 ATTTTGGTTACCTATGGGAGAATGGTGTGGGTTGTCCCATTGGTACCGTCCCCATACAAA 405
Query 371 GAGTCACCAAAGACGATCTTTTGAGATTAGACTCATTTGTTGATAATCATAAACCCCGTG 430
||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||
Sbjct 406 GAGTCACCAAAGAAGATCTTTTGAGATTCGACTCATTTGGCGATAATCATAAACCTCGTG 465
Query 431 GTTCTTGGAACACTACCACTTTTAAT-CTTAATAATCCTTTTCATCCCGACCAACATCAT 489
| |||||||| ||||||| | || || |||| | || |||||||||||
Sbjct 466 GCTCTTGGAATTTTACCACTGATGATACT-AATAGTGA----CA-----ACCAACATCAT 515
Query 490 TATGCGGTAGCTCGAACGAA-GGACATAGG-AAGGAGGTTCCATGGAGCAACGATGGGAC 547
| |||||| ||| | ||| || || || ||| |||||| ||||||||||||||| ||
Sbjct 516 TTTGCGGTGGCTAGGACGGTTGGCCA-AGACAAG-AGGTTCAATGGAGCAACGATGGAAC 573
Query 548 TTTGTATAACGGCTCCTAAGGTTAAGCCAACCCAATTCAGTAATTCTAGACTTCACATTC 607
||||| |||| ||||||||||||| ||||| |||||||||| |||| ||||||||||||
Sbjct 574 TTTGTTTAACCGCTCCTAAGGTTAGGCCAAACCAATTCAGTGCTTCTCGACTTCACATTC 633
Query 608 AGATGGGAAGGGATTTCCTCCAAGCCGGTTTGACTGTAAATCCAGTATTGTACAAGGACA 667
|||| ||||| |||||||||||| ||||||| |||||||||||| |||||||||||||
Sbjct 634 AGATTGGAAGTGATTTCCTCCAAACCGGTTTTACTGTAAATCCAACATTGTACAAGGACG 693
Query 668 AGCAACCTCGGACTTTTGTTTATACATCTGCAAATGGAAAATCATGTTACAATAGCAACT 727
| |||||||||||||| || |||||| | || |||||||||||||||||||| |||
Sbjct 694 ACCAACCTCGGACTTTCGTCTATACAAATTCAGGTGGAAAATCATGTTACAATAATGACT 753
Query 728 GCAACGTTGGAATGATAGC-CATCCGTCATGACTTAACA-CTTGGTCTGGCATTGCAGCC 785
|| |||| ||||||||| | | | ||||| || || || |||||| ||||||| |||
Sbjct 754 GCGACGTAGGAATGATA-CTCGTTCGTCAAGATTTT-CATCTTGGTATGGCATTATTGCC 811
Query 786 AGTGTCTACTCGTGGTTCTAGGCCAAGTTACTATACAAAGATCGGTCTAGTCAAAGAC-A 844
||||||| ||||||| ||| | ||| | | ||| ||| |||||||| |||| ||| |
Sbjct 812 AGTGTCTGTTCGTGGTGCTAAGACAACTCATTATGCAATCTTCGGTCTAATCAAGGACCA 871
Query 845 GA-AAATCTGGAAATTGGTTGTTGCGAATGGGTGGTAATTATG-AGCCAATAAATATTGG 902
| |||| |||||||||| ||||| ||| ||||||| || || | || | | ||
Sbjct 872 AATAAAT--GGAAATTGGTGGTTGC-AATT--TGGTAATGCTGCAG--AGGAAGT-T-GG 922
Query 903 ACTTTGGCCAGG-GCA-TAGGTTTCAACAAGGCTTTGGAGATTTTGTCGAGTGGGGTGGA 960
| ||||||| | | | ||| ||||| ||| ||| |||| |||| || ||||||||||||
Sbjct 923 ATTTTGGCC-GTCG-AGTAGATTTCATCAAAGCTCTGGAAATTTGGTGGAGTGGGGTGGA 980
Query 961 GAAGTGTACAGCGCAT-ATCTGCCGAGTCCTCAAATGGGATATGGATATTTCCCA-ATTC 1018
|||| ||| || |||| | | |||||||||||||||||||||||||||||| | || |
Sbjct 981 GAAGCGTATAGTGCATCA-CAGCCGAGTCCTCAAATGGGATATGGATATTTTCTTGATGC 1039
Query 1019 -AGGATAAAAGTTATGATGCATATATCCAACACATATCCATACTCGACCGTAATTA-TAA 1076
|| || | || |||||||||||| ||| ||||| || ||||| || ||| |||
Sbjct 1040 TAGTATGC--GCTACGATGCATATATCAAACGGATATCTGTAATCGACGGTT-TTAATAA 1096
Query 1077 CATAGACCGCAATGTGG-ACTAT-CTCGAAGACTTT-TCGGACAACAATCGAGGCTATCA 1133
||| |||||||| |||| | ||| | |||| | || | |||| | | ||| ||||| ||
Sbjct 1097 CATTGACCGCAAAGTGGCA-TATAC-CGAAAAATTCGT-GGACGATACTCGTGGCTACCA 1153
Query 1134 AGT-GATAGAC-ACCCGAG-AT-CCTAGACATAGC--G--GC-GGTCACATAATCTTTTA 1184
||| | ||||| || | || || | |||| | | || ||||| |||||||||||
Sbjct 1154 AGTTG-TAGACGACTATAATATTCCC-G-CATACCCAGAAGCCGGTCATATAATCTTTTA 1210
Query 1185 TGGTGGTCCGGGAAATATCT 1204
||||||||||| |||||||
Sbjct 1211 CGGTGGTCCGGGGAATATCT 1230
> AT4G15050.1 | Symbols: | Protein of Unknown Function (DUF239)
| chr4:8588548-8590345 REVERSE LENGTH=1191
Length=1191
Score = 898 bits (486), Expect = 0.0
Identities = 948/1160 (82%), Gaps = 75/1160 (6%)
Strand=Plus/Plus
Query 18 AGTGATATGGATGTTCTTAA--TG-TG--T-ATTGGTCA-CATAATTGTAAGTCATAACA 70
|||||||||||||||||||| || || | ||||| | ||||||| ||||||||| ||
Sbjct 6 AGTGATATGGATGTTCTTAATCTGTTGCATCTTTGGT-ATCATAATTATAAGTCATAGCA 64
Query 71 ATGACTTCGTGGAAGCCAAGAGCTTTTCTAAA-TCTGAAGATTTAGAAATCGAGAAGAGA 129
||||||| || ||||| |||||| |||||||| | |||||||||||||||||||||||||
Sbjct 65 ATGACTTTGTCGAAGCTAAGAGCCTTTCTAAAGT-TGAAGATTTAGAAATCGAGAAGAGA 123
Query 130 CTAAAGTCTATCAACAAACCCGCTGTCAAGATCATCAAGACTATAGATGGAGAAAGATAC 189
|||| | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct 124 CTAAGGACTATCAACAAACCTGCTGTCAAGATCATCAAGAGTATAGATGGAGAAAGATAC 183
Query 190 AGATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCATCCTTCTATGAAGAATCATACA 249
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||
Sbjct 184 GGATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCACCCTTCAATGAAGAATCACACA 243
Query 250 TACCATTACAAGATGCGTCCAATATGGAAAGGAATCAGAGAAAGAAAGACAAACAATACC 309
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 244 TACCATTACAAGATGCGTCCAATATGGAAAGGAATGAGAGAAAGAAAGACAAACAATACC 303
Query 310 GGTTTTGGTTACTTATGGGAGAATGGTGTGGGTTGTCCCATTGGTACGGTCCCTATTCAA 369
|||||||||| |||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct 304 AATTTTGGTTACCTATGGGAGAATGGTGTGGGTTGTCCCATTGGTACCGTCCCCATGCAA 363
Query 370 AGAGTCACCAAAGACGATCTTTTGAGATTAGACTCATTTGTTGATAATCATAAACCCCGT 429
|||||||| ||||| ||||| ||||||||||||||||||| |||||| ||||||| |||
Sbjct 364 AGAGTCACTAAAGAAGATCTATTGAGATTAGACTCATTTGGCGATAATTATAAACCTCGT 423
Query 430 GGTTCTTGGAAC-ACTACCACTTTTAAT-CTTAATAATCCTTTTCATCCCGACCAACATC 487
|| |||||||| | ||||||| | || || |||| | || || || |||||
Sbjct 424 GGCTCTTGGAATTA-TACCACTGATGATTCT-AATAGTAA----CAACCAGA--AACAT- 474
Query 488 ATTATGCGGTAGCTCGAACGAA-GGA-CATAGGAAGGAGGTTCCATGGAGCAACGATGGG 545
|| |||||| ||||| ||| || || | ||| |||||| |||||||||| ||||
Sbjct 475 -TT-TGCGGTGGCTCGGACGGTTGGCTCAGAC-AAG-AGGTTCAATGGAGCAACAATGG- 529
Query 546 A-CTTTGTATAACGGCTCCTAAGGTTAAGCCAACCCAATTCAGTAATTCTAGACTTCACA 604
| |||||| |||| ||||||||||||| || || ||||| |||| |||| |||||||||
Sbjct 530 ATCTTTGTTTAACCGCTCCTAAGGTTAGGCTAAACCAATACAGTGCTTCTCGACTTCACA 589
Query 605 TTCAGATGGGAAGGGATTTCCTCCAAGCCGG-TTTGACTGTAAATCCAGTATTGTACAAG 663
||||||| |||| |||||||||||| |||| ||| |||||||||||| ||||||||||
Sbjct 590 TTCAGATTGGAAATGATTTCCTCCAAACCGGCTTT-ACTGTAAATCCAACATTGTACAAG 648
Query 664 GACAAGC-AACCTCGGACTTTTGTTTATACATC-TGCAAATGGAAAATCATGTTACAATA 721
|||| || ||||||||||||| || |||||| | || || |||||||||||||||||
Sbjct 649 GACA-GCCAACCTCGGACTTTCGTCTATACAAAAT-CAGGTGAAAAATCATGTTACAATA 706
Query 722 GCAACTGCAACGTTGGAATGATAGCCA-TCCGTCATGAC-TTAACACTTGGTCTGGCATT 779
|| ||||| |||||||||||||| | | ||||| || || |||||||| |||||||
Sbjct 707 GCTACTGCGACGTTGGAATGATA-CTTGTTCGTCAAGATATTC-CACTTGGTATGGCATT 764
Query 780 G-CAGCCAGTGTCTACTCGTGGTTCTAGGCCAAGTTACTATACAAAGATCGGTCTAGTCA 838
| |||||||||| ||||||| ||||| ||| | | ||| | |||||||| | |
Sbjct 765 ATC-GCCAGTGTCTGTTCGTGGTGCTAGGACAACTCATTATGGAGTCTTCGGTCTAATTA 823
Query 839 AAGAC-AGA-AAATCTGGAAATTGGTTGTTGCGAATGGGTGGTAATTATG-AGCCAATAA 895
| ||| | | |||| |||||||||| ||||| ||| ||||||| || || | ||
Sbjct 824 AGGACCAAATAAAT--GGAAATTGGTGGTTGC-AATT--TGGTAATGCTGCAG--AGGAA 876
Query 896 ATATTGGACTTTGGCCAGG-GCA-TAGGTTTCAACAAGGCTTTGGAGATTTTGTCGAGTG 953
|| | ||| ||||||| | | | ||||||||| ||| ||| |||| |||| || |||||
Sbjct 877 AT-T-GGATTTTGGCC-GTCG-AGTAGGTTTCATCAAAGCTCTGGAAATTTGGTGGAGTG 932
Query 954 GGGTGGAGAAGTGTACAGCGCAT-ATCTGCCGAGTCCTCAAATGGGATATGGATATTTCC 1012
||||||||||||||||||||||| | |||||||||||||||||||||| ||| |||||
Sbjct 933 GGGTGGAGAAGTGTACAGCGCATCA-CTGCCGAGTCCTCAAATGGGATTTGGGTATTTTG 991
Query 1013 CAATTCA-GGATAAAA-GT--TATGATGCATATATCCAACACATATCCATACTCGACCGT 1068
|| | || | ||| | || |||||||||||| ||| ||||| || ||||| ||
Sbjct 992 ---TTGATGG-TCAAATGCGCTACGATGCATATATCAAACGGATATCTGTAATCGACGGT 1047
Query 1069 AATTA-TAACATAGACCGCAATGTGG-ACTAT-CTCGAAGACTTT-TCGGACAACAATCG 1124
||| ||| || |||||||| |||| | ||| | |||| | ||| | |||| ||| |||
Sbjct 1048 T-TTAATAAGATTGACCGCAAAGTGGCA-TATAC-CGAAAAATTTGT-GGACGACACTCG 1103
Query 1125 AGGCTATCAAGTGATAGACA 1144
||||| ||||| |||||||
Sbjct 1104 TGGCTACCAAGTTATAGACA 1123
> AT4G15056.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis
thaliana protein match is: Protein of Unknown Function
(DUF239) (TAIR:AT1G10190.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa
- 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink). | chr4:8595985-8597430
REVERSE LENGTH=678
Length=678
Score = 494 bits (267), Expect = 1e-138
Identities = 330/359 (92%), Gaps = 9/359 (3%)
Strand=Plus/Plus
Query 1 ATGGAAGTGAGAGGCCCAGTGATATGGATGTTCTTAATGTG-T--A---TTGGTCACATA 54
|||||||||||||||||||||||||||||||| |||||||| | | ||||| |||||
Sbjct 1 ATGGAAGTGAGAGGCCCAGTGATATGGATGTTGTTAATGTGTTGCATCTTTGGTAACATA 60
Query 55 ATTGTAAGTCATAACAATGACTTCGTGGAAGCCAAGAGCTTTTCTAAATCTGAAGATTTA 114
|||| ||||||||||||||| || ||||||||||||||||||||||||||| ||||||||
Sbjct 61 ATTGGAAGTCATAACAATGATTTTGTGGAAGCCAAGAGCTTTTCTAAATCTAAAGATTTA 120
Query 115 GAAATCGAGAAGAGACTAAAGTCTATCAACAAACCCGCTGTC-AAGATCATCAAGACTAT 173
||||||||||||||||||||| |||||||||||||||| ||| ||| |||||||||| ||
Sbjct 121 GAAATCGAGAAGAGACTAAAGACTATCAACAAACCCGCAGTCAAAG-TCATCAAGACCAT 179
Query 174 AGATGGAGAAAGATACAGATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCATCCTTC 233
||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 180 AGATGGAGAAATATACGGATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCATACTTC 239
Query 234 TATGAAGAATCATACATACCATTACAAGATGCGTCCAATATGGAAAGGAATCAGAGAAAG 293
|||||||||||| ||||||||||||||||||| | |||| ||||||||||| ||||||||
Sbjct 240 TATGAAGAATCACACATACCATTACAAGATGCTTTCAATCTGGAAAGGAATGAGAGAAAG 299
Query 294 AAAGACAAACAATACCGGTTTTGGTTACTTATGGGAGAATGGTGTGGGTTGTCCCATTG 352
| ||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||
Sbjct 300 AGAGACAAACAATACCGCTTTTGGTTATTTATGGGAGAATGGTGTGGGT-GTCCCATTG 357
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59236643100
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5