BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg330015
Length=3027
Score E
Sequences producing significant alignments: (Bits) Value
AT4G14920.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/... 1295 0.0
> AT4G14920.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type
zinc finger protein | chr4:8531043-8535842 REVERSE
LENGTH=3531
Length=3531
Score = 1295 bits (701), Expect = 0.0
Identities = 797/844 (94%), Gaps = 3/844 (0%)
Strand=Plus/Plus
Query 554 AGAGGAAGTACAAGCGTGAAATGAATTTTGATGAACCAATTAGGGTGCAGGGGAAAAATG 613
||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 638 AGAAGAAGTACAAGCGTGACATGAATTTTGATGAACCAATCAGGGTGCAGGGGAAAAATG 697
Query 614 GTGTCCTCAAGGTGATGGTGAACAAGCAGAATAAGGTAGGAGGGTTACTGCAAAATGCGA 673
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 698 GTGTCCTCAAGGTGATGGTGAACAAGCAGAATAAGATAGGAGGGTTACTGCAAAATGCGA 757
Query 674 AAGCTGAACAATCTCAATATGGCTCAAAGATTCAAGAGACTGGTAAAATACGTGTTGCTA 733
||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 758 AAGCTGAACAAACTCAATGTGGCTCAACGATTCAAGAGACTGGTAAAATACGTGTTGCTA 817
Query 734 TCCAGTCGCCAACCACTTTAAAAACTGAAAAGTTGCCGAAACTGCTTCCCCCGGTCAGAA 793
|||||| ||||| |||||||||||||||||||||||||||||||| |||||| | |||||
Sbjct 818 TCCAGTTGCCAAACACTTTAAAAACTGAAAAGTTGCCGAAACTGCCTCCCCCAGCCAGAA 877
Query 794 TACAGTCGAATGGGTTAAAAATGCCTATGTCCTTACCCATGAAGAGTAAGGGACAGGACC 853
||||||| |||||| ||||| |||| ||||||||| |||||||||||||||||||| |||
Sbjct 878 TACAGTCAAATGGGCTAAAACTGCCCATGTCCTTAACCATGAAGAGTAAGGGACAGAACC 937
Query 854 AAGATTCTGAAGATAGTGATAGCTCGGGGCGGCTGCAGAAGAGAATAATACAACCTCATA 913
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 938 AAGATTCTGAAGATAGTGATAGCTCGGGCCGGCTGCAGAAAAGAATAATACAACCTCATA 997
Query 914 AGCCCTCTCATATGTCAAGCACTGGAGGAGAAAATACTTTACCTGAAGTGTCAATGCCTT 973
|||||||||| ||||||||||||||||||||||| || |||||||||| |||||||||||
Sbjct 998 AGCCCTCTCAGATGTCAAGCACTGGAGGAGAAAAGACATTACCTGAAGCGTCAATGCCTT 1057
Query 974 CAAAAATCAGAGATGGAAAGATTAGGCGTGGTTCAGGCACAGAAAAACAAAGATTACGTG 1033
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1058 CCAAAATTAGAGATGGAAAGATTAGGCGTGGTTCAGGCACAGAAAAACAAAGATTACGTG 1117
Query 1034 AGCGAATCAGGGAAATGTTACTGGAAGCAGGGTGGACGATTGACTATAGACCTAGGAAGA 1093
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 1118 AGCGAATTAGGGAAATGTTACTGGAAGCAGGGTGGACGATTGACTACAGACCTAGGAGGA 1177
Query 1094 ATAGAGACTACCTAGATGCAGTTTATATAAGTCCCAGGGGAACAGCGTATTGGTCTATTA 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1178 ATAGAGACTACCTAGATGCAGTTTATATAAGTCCCAGGGGAACAGCGTATTGGTCTATTA 1237
Query 1154 TAAAGGCTTATGAAGCACTTCTGAAGCAGTTAAATAGTGGGGAAAAAG---CCAAGCCTT 1210
| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1238 TCAAGGCTTATGAAGCACTTCTGAAGCAGTTAAATAGTGGGGAAAAAGTTGCCAAGCCTT 1297
Query 1211 GTGAAGATAGTTCCACATTTACGCTGATCTCCGATGAGATACTCAGTCAGTTAACAAGGA 1270
|||| ||||||||||||||| | ||||| || ||||||||||||||||||||||||||||
Sbjct 1298 GTGACGATAGTTCCACATTTTCTCTGATATCAGATGAGATACTCAGTCAGTTAACAAGGA 1357
Query 1271 AAACCAAAAGAAAGATTGAAAAAGATATGAAAAGTGAGGAACAATCTGCCAGTGATAGCG 1330
|||||||||| ||||||||||||||||||||||| ||| ||| |||||||||||||| |
Sbjct 1358 AAACCAAAAGTAAGATTGAAAAAGATATGAAAAGGGAGCTACACTCTGCCAGTGATAGTG 1417
Query 1331 TTGGAAAAGCGACTTTTGCAAGAAATTTCTTAGCTATTAAAAATGAAGTAGGAAACGATG 1390
||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct 1418 ATGGAAAAGCGACTTTTGCAAGGAATTTCCTAGCTATTAAAAATGAAGTAGGAAACGATG 1477
Query 1391 ACAG 1394
||||
Sbjct 1478 ACAG 1481
Score = 1018 bits (551), Expect = 0.0
Identities = 595/616 (97%), Gaps = 4/616 (1%)
Strand=Plus/Plus
Query 1391 ACAGCAGAGATAGTTCA-AGGGGTACAACTTCAAAAAGTGCAAGCCCTTTGCATCACCAA 1449
||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||
Sbjct 1532 ACAGCAGAGATAGTTCACA-GGGTACAACTTCAAAAAGTGAAAGCCCTTTGCATCACCAA 1590
Query 1450 ACTGAAAAGTCAACTGGTTCCTCCTCTCACCGTGTGGATGGAGGGAAAAGTAGCAAACAT 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1591 ACTGAAAAGTCAACTGGTTCCTCCTCTCACCGTGTGGATGGAGGGAAAAGTAGCAAACAT 1650
Query 1510 GGTAGGAGTACGCTGTCGGTACGGCGTCCAGTCAGAGGAGATAATTCAGAGGA-TGATGG 1568
||||||||||| |||| ||| |||||| |||||||||||||||||||||| || ||||||
Sbjct 1651 GGTAGGAGTACACTGTTGGTGCGGCGTTCAGTCAGAGGAGATAATTCAGA-GAGTGATGG 1709
Query 1569 TTTTGTTCCCTCATCTGAAAAACAGACGATACTGGCATGGCTGATTGATAGTGGAACCTT 1628
|||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 1710 TTTTGTACCCTCATCTGAAAAACGGACGGTACTGGCATGGCTGATTGATAGTGGAACCTT 1769
Query 1629 AAAGTTGAGTGAAAAGGTGATGTACATGAACCAACGACGGACACGCGCAATGCTTGAGGG 1688
| |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1770 ACAGTTGAGTGAAAAGGTAATGTACATGAACCAACGCCGGACACGCGCCATGCTTGAGGG 1829
Query 1689 TTGGATAACAAGAGACGGGATTCACTGTGGTTGCTGTAGTAAAATTCTTTCAGTTTCAAA 1748
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||
Sbjct 1830 TTGGATAACAAGAGACGGGATTCACTGTGGTTGCTGTAGTAAAATTCTTGCGGTTTCGAA 1889
Query 1749 GTTTGAGATACATGCTGGAAGCAAATTGCGGCAGCCATTTCAGAACATATTTTTGAATTC 1808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1890 GTTTGAGATACATGCTGGAAGCAAATTGCGGCAGCCATTTCAGAACATATTTTTGAATTC 1949
Query 1809 TGGGGTTTCTCTTCTTCAATGCCAAATAGATGCATGGGATAAGCAAAAGGGTGCTGGGAA 1868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1950 TGGGGTTTCTCTTCTTCAATGCCAAATAGATGCATGGGATAAGCAAAAGGGTGCTGGGAA 2009
Query 1869 CATTGGTTTTTGTTCGGTAGATGTAATTGCTGATGATCCAAATGACGATGCTTGTGGCAT 1928
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2010 CATTGGTTTTTGTTCAGTAGATGTAATTGCTGATGATCCAAATGACGATGCTTGTGGTAT 2069
Query 1929 TTGTGGAGATGGAGGTGATTTAGTTTGCTGTGATGGTTGTCCCTCAACTTTCCACCAAAG 1988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2070 TTGTGGAGATGGAGGTGATTTAGTTTGCTGTGATGGTTGTCCCTCAACTTTCCACCAAAG 2129
Query 1989 ATGCCTAGACATACGG 2004
||||||||||||||||
Sbjct 2130 ATGCCTAGACATACGG 2145
Score = 678 bits (367), Expect = 0.0
Identities = 408/428 (95%), Gaps = 2/428 (0%)
Strand=Plus/Plus
Query 2167 CTCTCCGAAGGTGTCAAGAAGTATGTTGGTGTCAAACATGAGTTGGAAGCTGGATTTTCA 2226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2353 CTCTCCGAAGGTGTCAAGAAGTATGTTGGTGTCAAACATGAGTTGGAAGCTGGATTTTCA 2412
Query 2227 TGGTCTCTAGTTCATAGGGAATGTGCAGATTCAGATTTATTCTTAGGTGAACACCCTCAT 2286
||||||||||||||||||||||| || |||||||||||| |||| ||| ||||||||||
Sbjct 2413 TGGTCTCTAGTTCATAGGGAATGCACAAATTCAGATTTATCCTTAAGTGGACACCCTCAT 2472
Query 2287 ATTGTGGAAAACAATTCCAAGCTTGCATTAGCTCTGACAGTCATGGATGAATGCTTTCTG 2346
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2473 ATTGTGGAAAACAATTCCAAGCTTGCATTAGCTTTGACAGTCATGGATGAATGCTTTCTG 2532
Query 2347 CCCATTGTTGACAGAAGAAGTGGGGTGAATATAGTACGAAATGTCCTTTACAATTGTGGG 2406
|||||| ||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2533 CCCATTATTGACAGGAGGAGTGGGGTGAATATAGTACAAAATGTCCTTTACAATTGTGGG 2592
Query 2407 TCGAACTTTAACCGGCTGAACTTCGGTGGATTCTATACTGCTCTTCTTGAGAGAGGCGAC 2466
|| ||||| || ||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 2593 TCCAACTTCAATCGGCTGAACTTTGGTGGATTCTATACTGCTCTTCTTGAAAGAGGCGAC 2652
Query 2467 GAAATAGTTGCTTCTGCATCTATTAGATTTCATGGTAACCATCTAGCTGAGATGCCGTTC 2526
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2653 GAAATAGTTGCTTCAGCATCTATTAGATTTCATGGTAACCGTCTAGCTGAGATGCCGTTC 2712
Query 2527 ATTGGAACTCGGCATGTCTACAGACACCAAGGGATGTGCCGGCGGCTTTTCAGCGTCA-T 2585
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 2713 ATTGGAACTCGGCATGTCTACAGACACCAAGGGATGTGCCGGCGGCTTTTCAGCGT-AGT 2771
Query 2586 TGAATCAG 2593
||||||||
Sbjct 2772 TGAATCAG 2779
Score = 555 bits (300), Expect = 1e-156
Identities = 387/430 (90%), Gaps = 2/430 (0%)
Strand=Plus/Plus
Query 2599 TGTGACCCATGCAATGAAGGCACCAATTCTGCGATCAAGACTAATGAAGTTTCCGTCTTG 2658
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 2989 TGTGACCCATGCAATGAAGGCACTAATTCAGCGATCAAGACTAATGAAGTTTCCGTCTTG 3048
Query 2659 GAGACCGCATCTCCTTCAGGAGATAAACCAATACCAGATTATGTGGTCGAACACCAACTG 2718
|||||| |||| || ||| |||||||||| || |||||||| |||||||||||||||
Sbjct 3049 GAGACCACATCACCGTCAAGAGATAAACCGGTATCAGATTATTTGGTCGAACACCAACCA 3108
Query 2719 TTT-ACGGATGTAAATTCCGCTTCCCGAGATAGTCCAGTCCACAATGGATACCCCAAAAT 2777
| | | |||||||| ||| |||||||| ||||||| ||||||| |||| |||||||||||
Sbjct 3109 TATGA-GGATGTAAGTTCTGCTTCCCGGGATAGTCTAGTCCACGATGGTTACCCCAAAAT 3167
Query 2778 GCAAGAGACCGAGTGCAAAATTTCAACCATGGCGAGATCATCAGATATGGAGGAGCACAT 2837
|| |||||| | || ||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 3168 GCTAGAGACTGCGTTCAAAACTTCAACCATGGCGAGATCATCAGATATGGAGAAGCACAT 3227
Query 2838 GGACTGCAAATCTTCCTTTAGTCCTTTTGTTGGAGAAGATGAAGAAGATAGTTTAATTGA 2897
|||||||||| |||||| ||||| |||| |||||||||||| |||||||||||||||||
Sbjct 3228 GGACTGCAAAACTTCCTATAGTCGATTTGATGGAGAAGATGAGGAAGATAGTTTAATTGA 3287
Query 2898 GTCTCCTCCTCAACGGAACAGCGACATGGCTTTCTTAGATCACATTATCCGTTCTCCGGT 2957
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 3288 GTCTCCTCCTCAACGAAACAGCGACATGGCTTTCTTAGATCACATCATCCGCTCTCCGGT 3347
Query 2958 AGACACTGGTAAAATGGCAAACGGAGATGTGTATGGTTCAGGGGATGATGATTCTCCGGA 3017
|||||||||| || || |||| ||||||| ||||||||||||||||| |||||||||||
Sbjct 3348 AGACACTGGTGCAACGGAAAACAGAGATGTCTATGGTTCAGGGGATGACGATTCTCCGGA 3407
Query 3018 AACGCAATGA 3027
||||||||||
Sbjct 3408 AACGCAATGA 3417
Score = 481 bits (260), Expect = 2e-134
Identities = 298/315 (95%), Gaps = 8/315 (3%)
Strand=Plus/Plus
Query 242 GTTTTGTGGGGAAGAGTAGAGAGTGGAAGGAGAGTAAGAGGCATAGATTAgatgatgatg 301
||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 287 GTTTTGTGGGGAATAGTAGAGAGTGGAAGGAGAGTAAGAGACATAGATTAGATGATGAT- 345
Query 302 acgatgatgatgatgatgatgatgaggagagtgaagatgaattgttggcaatgaggatga 361
||||| | |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 346 --GATGA-CA--ATGATGATGATGAGGAGAGTGAAGATGAATTGATGGCAATGAGGATGA 400
Query 362 ggaggTCGTTTGATGGCAGTGGTGTTGATATTGGTAAGAAAGCTTATTTGGGGTCTGCTC 421
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 401 GGAGGTCGTTTGATGGAAGTGGTGTTGATATTGGTAAGAAAGCTTATTTGGGGTCTGCTC 460
Query 422 GA-TTTGGTAATGGTAGGGAATATGGAACTGGTTCTAGTCGTAAAGATTTAGATATTGAG 480
| |||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 461 -ACTTTGCTAATGATAGGGAATATGGAACTGGTTCTAGTCGTAAAGGTTTAGATATTGAG 519
Query 481 AAGAGAAGAAAACCGTATTTAGATGGATCAGGGAACATAGGTTTTGGTAATCAAGGTTAT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 520 AAGAGAAGAAAACCGTATTTAGATGGATCAGGGAACATAGGTTTTGGTAATCAAGGTTAT 579
Query 541 AGAAACATGTGTAAG 555
||||||| |||||||
Sbjct 580 AGAAACAGGTGTAAG 594
Score = 368 bits (199), Expect = 2e-100
Identities = 231/247 (94%), Gaps = 0/247 (0%)
Strand=Plus/Plus
Query 1 ATGGATAGAGGTGGGAGGAGATCTGGTGAATCTCCAGGGGTATTGATAAAGAAGAGAAGT 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1 ATGGATAGAGGTGGGAGGAGATCTGGTGAATCTCCAGGGGTATTGATTAAGAAGAGAAGT 60
Query 61 TCCTCTGGTTGCTTGATTGTGAAGAAGAACGATGGTGTTGGTAGAATTTGTTCGTTTTCT 120
|| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 61 TCTTCTGGTTGCTTAATTGTGAAGAAGAACGATGGTGTTGGTAGGATTTGTTCGTTTTCA 120
Query 121 GAGAATCGTCCGAATTGGGAGTCCAATAAGAGGTCTACGATGATTTTGAGTGATTCTGAG 180
|||| |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||
Sbjct 121 GAGAGTCGTCCGAATTGGGAGTCCAATAAGAGGTCTAGGATGATTACGAGTGACTCTGAG 180
Query 181 TCTAGCGATAAATTTGCAATCCCTCAAAATATGCGACACTATCGTAATGTAGAAGAGAGT 240
|||||||||| |||| | ||||||| ||||||||| || |||||||||||||||||||||
Sbjct 181 TCTAGCGATAGATTTACCATCCCTCGAAATATGCGCCAGTATCGTAATGTAGAAGAGAGT 240
Query 241 CGTTTTG 247
|||||||
Sbjct 241 CGTTTTG 247
Score = 206 bits (111), Expect = 1e-51
Identities = 119/123 (97%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 2044 TACAGATGTTTCCTCTTGGTGATTGGCATTGCCCCAATTGTACATGCAAATTCTGTAGGG 2103
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2141 TACGGATGTTTCCTCTTGGTGATTGGCATTGCCCCAATTGTACATGCAAATTCTGTAAGG 2200
Query 2104 CAGTTATTGAAGATGTTACTCAGACCGTGGATGCAAATACCTGCAAAATGTGTGAGAAAA 2163
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct 2201 CAGTTATTGAAGATGTTACTCAGACTGTGGGTGCAAATACCTGCAAAATGTGTGAGAAAA 2260
Query 2164 AAT 2166
|||
Sbjct 2261 AAT 2263
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 150500829000
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5