BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg330061
Length=2760
Score E
Sequences producing significant alignments: (Bits) Value
AT4G14510.1 | Symbols: ATCFM3B, CFM3B | CRM family member 3B | ... 2026 0.0
AT3G23070.1 | Symbols: ATCFM3A, CFM3A | CRM family member 3A | ... 774 0.0
> AT4G14510.1 | Symbols: ATCFM3B, CFM3B | CRM family member 3B
| chr4:8337276-8341159 REVERSE LENGTH=2940
Length=2940
Score = 2026 bits (1097), Expect = 0.0
Identities = 1326/1432 (93%), Gaps = 34/1432 (2%)
Strand=Plus/Plus
Query 32 CGACGACTACTTCGGCGAAGTTT-TCCGATTCGT-TGGGAAGCTCTTTCTGCAAGTTCCA 89
||||||||||||||||||||||| | |||||| | ||||||| |||||||||||||||||
Sbjct 146 CGACGACTACTTCGGCGAAGTTTGT-CGATTC-TCTGGGAAGTTCTTTCTGCAAGTTCCA 203
Query 90 TGGAAAAAGTTCGTCAATTTCACTCAGGTCCTATATATTCGGTTTTTCTTTTATAAAAAA 149
||| | |||||| |||||||||||||||||||||| ||||||||| |||||||| |||||
Sbjct 204 TGGTACAAGTTCATCAATTTCACTCAGGTCCTATAGATTCGGTTTCTCTTTTATGAAAAA 263
Query 150 GGCTAAGCGGTTATCGTGTGAAGGTAGT----G--GTAGTAGCAGTAGGAATGAGAATTG 203
| ||| || |||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 264 TGTTAAACGATTATCGTGTGAAGGTAGTAGCAGTAGTAGTAGCAGTAGGAATGAGAATTG 323
Query 204 GAATAGAAAC-CAGAGGCAGAATCAATTTAGACCTTCAAAGGTAGTGTTGAATCGTCGAA 262
|||||| ||| |||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 324 GAATAG-AACACAGAAGCAGAATCAGTTTAGACCTTCAAAGGTAGTGTTGAATCGTCGAA 382
Query 263 AAGAAGAGAGGTTTTCGGATTTAGGAGTTATGAGTGGTGAGAACAGTAGTCGAAGTAGTG 322
|||| ||||| |||||||||||||| ||||| |||||||||||||||||||||||| |||
Sbjct 383 AAGACGAGAGATTTTCGGATTTAGGGGTTATAAGTGGTGAGAACAGTAGTCGAAGTGGTG 442
Query 323 ATGTTGGTGGT-G--GT--G-G--G-AGTACAATGGAGAAGATTGTTGAGAAGTTGAAAA 373
||||||||||| | || | | | |||||||||||||||||||| |||||||| ||||
Sbjct 443 ATGTTGGTGGTGGTAGTGGGAGTAGTAGTACAATGGAGAAGATTGTAGAGAAGTTAAAAA 502
Query 374 AGTATGGATTTGTGGATGATGATCAGTTTCAAGATAAGGAAGTTGAACAAGAGAGAAGAA 433
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 503 AGTATGGATTTGTGGATGAAGATCAGTTTCAGGATAAGGAAGTTGAACAAGAGAGAAGAA 562
Query 434 TTGAGGAA-AGGTCGGTGGAGGATAGATTCTATGTCGAAGAAAGAAGAGGTGGATCCTCG 492
|||| ||| || ||||||||||| || |||||||| ||||||||||||||||||| ||||
Sbjct 563 TTGA-GAAGAGTTCGGTGGAGGAAAGGTTCTATGTGGAAGAAAGAAGAGGTGGATTCTCG 621
Query 493 GAGGAATCACCATTTGGTGTGTTTGGAGGG-A--ATGAAGTTAAGTTTCCTTGGGAGAAG 549
|||||||||||||||||||| | ||||||| | |||||||||||||||||||||| |||
Sbjct 622 GAGGAATCACCATTTGGTGTATATGGAGGGAATGATGAAGTTAAGTTTCCTTGGGAAAAG 681
Query 550 GTGAGTTCTATGGAGAAGAAGGAGTTGGTAAATGGAGAGTGGACAGCGAAGAAGGAGAGT 609
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 682 GTGAGTTCTATGGAGAAGAAGGAGTTGGTAAATGGAGAGTGGACAGCTAAGAAGGAGAGT 741
Query 610 AGATACTTGTTGGCGGAGAGGACTCTTTCGGAATCTGAGCTGAATCGGTTGAGGAATGTG 669
||||||| | ||||||||| |||||||||||||| ||| ||||||||||||||||||||
Sbjct 742 AGATACTCGCTGGCGGAGATGACTCTTTCGGAATTTGAATTGAATCGGTTGAGGAATGTG 801
Query 670 ATGTTTCGAGCGAAGAGTAAGATGAGAGTTACGGGTGCAGGTGTTACTCAGGCTGTGGTA 729
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 802 ATGTTTCGAACAAAGAGTAAGATGAGAGTTACGGGTGCAGGTGTTACTCAGGCTGTGGTT 861
Query 730 GATGCAATTCAGGAGAAGTGGAAGAGCTCAGAGATTGTGAGACTTAAGATTGAAGGAGCA 789
|||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| ||
Sbjct 862 GATGCAATCCAGGAGAAGTGGAAGGGGTCAGAGATTGTGAGACTTAAGATTGAAGGATCA 921
Query 790 AGTGCCCTAAACATGAGAAGGATGCATGAGATATTAGAGAGAAAAACTGGTGGTTTGGTG 849
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 922 AGTGCACTCAACATGAGAAGGATGCATGAGATATTAGAGAGAAAAACTGGTGGTTTGGTG 981
Query 850 ATTTGGAGGTCAGGAACTTCCATCGCATTGTACAATTACAAAGGTGGCAGTAACAGGGAT 909
|||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 982 ATTTGGAGGTCAGGGACTTCCATCGCCTTGTACAATTACAAAGGTGGCAGCAACAGGGAT 1041
Query 910 GGATCAGGGAATATGATCAAGCGAA-TATACAGAAGAGCAGAGACATTGCCGTCTTCCTT 968
||||||||||| |||| ||||| || |||||||||||||||||| |||||| |||| |||
Sbjct 1042 GGATCAGGGAACATGAACAAGC-AAGTATACAGAAGAGCAGAGAGATTGCCATCTT-CTT 1099
Query 969 ACCTACGAATACAAGTACAGTGGATCAAAGTGTTCAACTAGTGCATTTTCCTCAGCTAGA 1028
||| |||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 1100 ---TAC--CTACAAGTACAGTGGATCAAAGTGTTCAACTAGTGAATCTTCCTCAGCTAGA 1154
Query 1029 GAAGGAGCCAACCGTTGTGGGAAATAAAGACACGACATCTCCACAAGAAGTAGAATATGA 1088
|||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1155 GAAGGAGCCAACTGTTGTGGGAAATAAAGACAGGACATCTCCACAAGAAGTAGAATATGA 1214
Query 1089 AGATGAAATAAATGAACTGTTAGAGGGCCTTGGTCCTCGGTACACAGACTGGCAGGGAGG 1148
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 1215 AGATGAAATAAATGAACTGTTAGAGGGTCTTGGTCCTCGGTACACGGACTGGCAGGGAGG 1274
Query 1149 TTATCCGTTACCTGTTGATGCTGATTTGCTTCCTGGGATCGTTCCTGGTTATGAACCCCC 1208
||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct 1275 TTATCCGTTACCTGTTGATGCTGATTTGCTTCCAGGGATTGTTCCTGGTTACGAACCTCC 1334
Query 1209 TTTTAGGGTACTTCCTTATGGAGTGAGATCAACTCTGGGAACAAAGGAGGCTACCTCTTT 1268
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1335 TTTTAGGGCACTTCCTTATGGAGTGAGATCAACTCTGGGAACAAAGGAGGCAACCTCTTT 1394
Query 1269 AAGAAGAATTGCCACAGTTCTTCCTCCACACTTTGCTTTAGGTCGAAGTAGACAGCTGCA 1328
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1395 AAGAAGAATTGCTACAGTTCTTCCTCCCCACTTTGCTTTAGGTCGAAGTAGACAGCTGCA 1454
Query 1329 AGGGTTGGCAACAGCCATGGTTAAGTTATGGCAAAAGAGTTTGATTGCCAAGGTTGCCCT 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1455 AGGGTTGGCAACAGCCATGGTTAAGTTATGGCAAAAGAGTTTGATTGCCAAGGTTGCCCT 1514
Query 1389 TAAACGGGGTGTACAACTGACTACCAGCGAGAGAATGGCTGAGGACATCAAG 1440
|||||| |||||||||||||| ||||| |||||||||||||| |||||||||
Sbjct 1515 TAAACGTGGTGTACAACTGACGACCAGTGAGAGAATGGCTGAAGACATCAAG 1566
Score = 1893 bits (1025), Expect = 0.0
Identities = 1201/1282 (94%), Gaps = 27/1282 (2%)
Strand=Plus/Plus
Query 1482 ATTGACTGGAGGTATGCTGCTCTCGAGGAACAAAGATTTCTTGGTTTTCTACAGAGGAAA 1541
|||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 1569 ATTGACGGGAGGTATGCTGCTTTCGAGGAACAAAGATTTTTTGGTTTTCTACAGAGGAAA 1628
Query 1542 GAATTTTTTGTCACTAGAAGTAGCTGAAGCATTAATGGAGAAGGAGAGGCTTGTAAGGAC 1601
|| |||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||
Sbjct 1629 GAGTTTTTTGTCACTAGAAGTAGGTGAAGCATTGATGGAGAAGGAGATGCTTGTAAGGAC 1688
Query 1602 TTTGCAAGACGAAGAGGAACAAGCACGTCTAAGGGCATCATCGGCTCTGGTTGTCCCAAG 1661
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1689 TTTGCAAGACGAAGAGGAACAAGCACGTCTAAGAGCATCATCGGCTCTGGTTGTCCCAAG 1748
Query 1662 TATAAAAGCTAATCAA-AACCTTGCAAGGACTTTGCAAGACGAAGAGGAACAGTCACGTC 1720
|||||| ||||||||| || ||||||||||||||||||||| ||||||||||| ||||||
Sbjct 1749 TATAAAGGCTAATCAACAA-CTTGCAAGGACTTTGCAAGACAAAGAGGAACAGGCACGTC 1807
Query 1721 CATCGGCTCTGGTTGTCCCAAGTACTAAAGCTAATCAAACCCTTGTTTCTGCTGGTAGTC 1780
|||| ||||||||| | |||||||||||||||||||||| |||||||||||| |||| ||
Sbjct 1808 CATCAGCTCTGGTTTTACCAAGTACTAAAGCTAATCAAAACCTTGTTTCTGCCGGTACTC 1867
Query 1781 TTGGAGAAACTCTTGATGCAACTGGTAAGTGGGGGAAAAATCTGGATAACGATGATCATG 1840
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 1868 TTGGAGAAACTCTTGATGCAACTGGTAAATGGGGAAAAAATCTGGATAACGATGATCATG 1927
Query 1841 TGGAGGAAATGAAACAAGAGGTTGAGAGAA-TGAGATCTGCAAAACTTGTCAGGAAGTTG 1899
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1928 TGGAGGAAATGAAACAAGAGGTTGAGA-AAGTGAGATCTGCAAAACTTGTCAGGAAGTTG 1986
Query 1900 GAAAGGAAACTTGCTTTTGCTGAGAAAAAGCTGCTGAAAGCTGAACGGGCTTTAGCTAAG 1959
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1987 GAAAGGAAACTTGCTTTCGCTGAGAAAAAGCTGCTGAAAGCTGAACGGGCTTTAGCTAAG 2046
Query 1960 GTGGAGGAATCTCTGAAGCCAGCAGAGCAGAGAACAGACCTTGAGGGCATAACTGAGGAA 2019
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 2047 GTGGAGGAATCTCTGAAGCCAGCAGAGCAGAGAACAGACCTTGAGGGCATAACAGAAGAA 2106
Query 2020 GAGAGATTTATGTTCCAAAAGCTCGGATTGAAGATGAAAGCTTTCTTACTTCTTGGTCGA 2079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2107 GAGAGATTTATGTTCCAAAAGCTCGGATTGAAGATGAAAGCTTTCTTACTTCTTGGTCGA 2166
Query 2080 AGAGGGGTGTTTGATGGGACTGTAGAGAACATGCACTTGCACTGGAAATATCGGGAGCTG 2139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2167 AGAGGGGTGTTTGATGGGACTGTAGAGAACATGCACTTGCACTGGAAATATCGGGAGCTG 2226
Query 2140 ATCAAGATTCTTGTAAAGGCTAAAAGTTTAGAGGGTGCGA-AGAAAGTGGCAATGGCCCT 2198
||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct 2227 ATCAAGATTCTTGTAAAGGCTAAAACTTTAGAGGGTGC-ACAGAAAGTGGCAATGGCCCT 2285
Query 2199 TGAAGCCGAGAGTGGAGGTATCCTGGTTTCTGTTGACAAAATTTCCAAAGGGTATGCCGT 2258
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2286 TGAAGCCGAGAGTGGAGGTATCCTGGTTTCTGTTGACAAAATTTCCAAAGGCTATGCCGT 2345
Query 2259 AATCGTGTATAGAGGAAAAGACTATAAGCGTCCTACCACGTTGAGGCCTAAAAACCTCTT 2318
||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct 2346 AATCGTGTATAGAGGAAAAGATTATAAACGTCCTACCACACTGAGGCCTAAAAACCTCTT 2405
Query 2319 GACAAAGAGGAAAGCTTTGGCACGTTCTCTTGAGCTCCAGAAACGTGAGGCTCTTATTAA 2378
||||||||||||||||||||| |||||||||||||| || ||||| ||||||||||||||
Sbjct 2406 GACAAAGAGGAAAGCTTTGGCTCGTTCTCTTGAGCTTCAAAAACGCGAGGCTCTTATTAA 2465
Query 2379 ACACATTGAGGCGGTACAGACGAGATCAGAGCAGCTGAGAGCTGAAATTGAACAAGTGGA 2438
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2466 ACACATTGAGGCGATACAGACGAGATCAGAGCAGCTGAGAGCTGAAATTGAACAAGTGGA 2525
Query 2439 ACTTGTAAAAGACAAGGGAGATGAAGCGTTATACGACAAGCTTGACATGGCTTATTCTTC 2498
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 2526 ACTTGTAAAAGACAAGGGAGATGAAACATTATACGACAAGCTTGACATGGCTTATTCTTC 2585
Query 2499 TGATGAGGAGACCGAAGAAACAGATGGAGAGGAAGATGACATGTATTTAGATACATACGA 2558
||| ||||| || ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2586 TGACGAGGAAACAGAAGAAACAGATGGAGAGGAAGATGACGTGTATTTAGATACATACGA 2645
Query 2559 AGACGAGGGAGAAGATGGTGAAGAAGGTGAGATTCAGGCCAAGGGTTCATTATCTGAAAC 2618
||||||||||||||||| ||||||||||| |||||||||||| |||||| ||||||||||
Sbjct 2646 AGACGAGGGAGAAGATGATGAAGAAGGTGGGATTCAGGCCAACGGTTCACTATCTGAAAC 2705
Query 2619 AGATGTTGGATTTGGTTCAGATGATGAACTCTGGGATTCAGACGAATCAGACAGAGAGTT 2678
|||||||| ||||||||||||||| | || | ||| | |||| ||
Sbjct 2706 AGATGTTGAATTTGGTTCAGATGA--A--TC----A----GAC-A--CAGAT------TT 2744
Query 2679 TGGCAATGATTCTGCATCCTCCACAACACCAGAAACAACCTTTGTAGATGTACAGAACGA 2738
|||| || ||||||||||||| |||||||||||||||||||||||||| | ||||| ||
Sbjct 2745 TGGCGATAATTCTGCATCCTCTACAACACCAGAAACAACCTTTGTAGAACTGCAGAATGA 2804
Query 2739 GGAACTTCATGTGCAACCATAA 2760
||||||| |||| |||||||||
Sbjct 2805 GGAACTTGATGTACAACCATAA 2826
> AT3G23070.1 | Symbols: ATCFM3A, CFM3A | CRM family member 3A
| chr3:8203469-8207419 FORWARD LENGTH=2901
Length=2901
Score = 774 bits (419), Expect = 0.0
Identities = 811/992 (82%), Gaps = 59/992 (6%)
Strand=Plus/Plus
Query 1682 TTGCAAGGACTTTGCAAGACGAAG-AG-G-A-ACA-G--T--CACGTCCATCGGCTCTGG 1732
||| |||||||||||||||||||| || | | || | | | || |||||||||||
Sbjct 1656 TTGTAAGGACTTTGCAAGACGAAGAAGAGCAGGCACGTTTAAGAGGTTCATCGGCTCTGA 1715
Query 1733 TTGTCCCAAGTACT-AA--AGCTAATCAAACCCTTGTTTCTGCTGGTAGTCTTGGAGAAA 1789
|||||||||||||| || |||||| ||| |||||||||||||||| |||||| ||||
Sbjct 1716 TTGTCCCAAGTACTGAACCTGCTAAT-AAA--CTTGTTTCTGCTGGTACTCTTGGTGAAA 1772
Query 1790 CTCTTGATGCAACTGGTAAGTGGGGGAAA-AATCTGGATAACGATGATCATGT-GGAGGA 1847
|||||||||| |||||||||| ||||||| |||||||| | ||||||||| | || ||
Sbjct 1773 CTCTTGATGCGACTGGTAAGT-GGGGAAAGAATCTGGACGATGATGATCAT-TCAGACGA 1830
Query 1848 AATGAAACAAGAGGTTGAGAGAATGAGATC-TGCA-AAACTTGTCAGGAAGTTGGAAAGG 1905
| |||||||||||||||||| | ||||| | || | || ||||||||||| ||||||||
Sbjct 1831 AGTGAAACAAGAGGTTGAGATATTGAGA-CATG-AGAATCTTGTCAGGAAACTGGAAAGG 1888
Query 1906 AAACTTGCTTTTGCTGAGAAAAAGCTGCTGAAAGCTGAACG-GGCTTTAGCTAAGGTGGA 1964
||||||||||||||||||| ||||||| ||||||| ||||| || ||| |||||||||||
Sbjct 1889 AAACTTGCTTTTGCTGAGAGAAAGCTGTTGAAAGCCGAACGTGG-TTTGGCTAAGGTGGA 1947
Query 1965 GGAATCTCTGAAGCCAGCAGAGCAGAGA-ACAGA-CCTTGAGGGCATAACTGAGGAAGAG 2022
| | ||| ||||| |||||||||||| | ||| || || |||||||||| ||||||
Sbjct 1948 AGTGTGTCTTAAGCCCGCAGAGCAGAGAGA-AGATCC-AGAAAGCATAACTGATGAAGAG 2005
Query 2023 AGATTTATGTTCCAAAAGCTCGGATTGAAGATGAAAGCTTTCTTACTTCTTGGTCGAAGA 2082
||||||||||||| ||||| || ||||| |||||||||||||||||||| ||| | ||
Sbjct 2006 AGATTTATGTTCCGCAAGCTTGGCTTGAAAATGAAAGCTTTCTTACTTCTAGGTAGGCGA 2065
Query 2083 GGGGTGTTTGATGGGACTGTAGAGAACATGCACTTGCACTGGAAATATC-GGGAGCTGAT 2141
|| ||||||||||| || || ||||||||||||||||| |||||||| | | ||| || |
Sbjct 2066 GGAGTGTTTGATGGTACAGTGGAGAACATGCACTTGCATTGGAAATA-CAGAGAGTTGGT 2124
Query 2142 CAAGATTCTTGTAAAGGCTAAAAGTTTAGAGGGTGCGAAGAAAGTGGCAATGGCCCTTGA 2201
||| ||| |||| |||||||||| ||| || |||| |||||||||||| | ||||||||
Sbjct 2125 CAAAATTATTGTGAAGGCTAAAACTTTTGACGGTGTAAAGAAAGTGGCATTAGCCCTTGA 2184
Query 2202 AGCCGAGAGTGGAGGTATCCTGGTTTCTGTTGACAAAATTTCCAAAGGGTATGCCGTAAT 2261
|||||||||||| ||||||||||||||| ||||||| || ||||||| |||||| | ||
Sbjct 2185 AGCCGAGAGTGGTGGTATCCTGGTTTCTATTGACAAGGTTACCAAAGGATATGCCATTAT 2244
Query 2262 CGTGTATAGAGGAAAAGACTATAAGCGTCCTACCACGTTGAGGCCTAAAAACCTCTTGAC 2321
|||||| |||||| ||||||||||||||||||||| |||||| || ||||| || |||||
Sbjct 2245 CGTGTACAGAGGACAAGACTATAAGCGTCCTACCATGTTGAGACCGAAAAATCTTTTGAC 2304
Query 2322 AAAGAGGAAAGCTTTGGCACGTTCTC-TTGAGCTCCAGAA-ACGTGAGGCTCTTATTAAA 2379
||||||||| ||||| || ||||| | |||||||||| || ||| |||| |||| | ||
Sbjct 2305 AAAGAGGAAGGCTTTAGCGCGTTC-CATTGAGCTCCA-AAGACGCGAGGGTCTTCTGAAG 2362
Query 2380 CACATTGAGGCGGTACAGACGAGATCAGAGCAGCTGAGAGCTGAAATTGAACAAGTGGA- 2438
|||||| || | ||| ||| | || | |||||||||||||||||||||||| ||||
Sbjct 2363 CACATTTCTACGATGCAGGCGAAAGCAAAACAGCTGAGAGCTGAAATTGAACAAATGGAG 2422
Query 2439 ACTTGTAAAAGACAAGGGAGATGAAGCGTTATACGACAAGCTTGACATGGCTTATTCTTC 2498
| |||| ||||||||| ||||||| ||||||| |||||||||| ||||||||| ||||
Sbjct 2423 A-AGGTAACAGACAAGGGTGATGAAGAGTTATACAACAAGCTTGATATGGCTTATGCTTC 2481
Query 2499 T---GATGAGGAGACCGAAGAA-ACAGATGGAGAGGAAGATGACATGTATTTAGATACAT 2554
| ||||||||||| || ||| | |||| || || |||| ||| | | ||| || |
Sbjct 2482 TAGCGATGAGGAGACAGACGAAGA-AGAT---GATGATGATG-CAT-T-TCCAGAGACGT 2534
Query 2555 ACGAAGACGAGGGAGAAGATGGTGAAGAAGGTGAGATTC-AGGCCAAGGGTTCATTATCT 2613
| | ||| | |||||||||||||||||||||||||||| || | | ||| | | ||||
Sbjct 2535 ATGCAGA--A-GGAGAAGATGGTGAAGAAGGTGAGATTCTAG-C-AGGGGAAC-T-ATCT 2587
Query 2614 GAAACAGATGTTG--GATTTGG-TTCAGATGA 2642
|||||||| | | ||||||| |||| ||||
Sbjct 2588 GAAACAGAGGATAAAGATTTGGATTCAAATGA 2619
Score = 721 bits (390), Expect = 0.0
Identities = 1019/1305 (78%), Gaps = 114/1305 (9%)
Strand=Plus/Plus
Query 196 GAGAATTGGAATAGAAACCAGAGGCAG-AATCAATTTAGACCTTCAAAGGTAG-TGTTGA 253
|||||||||||||||| |||| | | |||||| || |||| ||||||||| || |||
Sbjct 293 GAGAATTGGAATAGAATTCAGAAAC-GTAATCAACCTAAACCTCCAAAGGTAGTTG-TGA 350
Query 254 ATCGTCGAAAAGAAGAGAGGTTTTC-GGATTTAGGAG-TTATGAGTGGTGAGAACAGTAG 311
|| ||||||||||| ||| ||||| || | |||| || |||||||| || | ||
Sbjct 351 ATTATCGAAAAGAAGGGAGATTTTCTGG--GTCGGAGATTGTGAGTGGT--GATGA-TAA 405
Query 312 TCGAAGTAGTGATGTTGGTGGTGGTGGGAGTACAATGGAGAAGATTGTTGAGAAGTTGAA 371
| |||||| || | ||||| |||| ||||| ||||||||||| || ||||| |||||
Sbjct 406 TAGAAGTA--GA-GATGGTGATGGT---AGTACTATGGAGAAGATAGTGGAGAAATTGAA 459
Query 372 -AAAGTATGGATTTGTGGATGATGATCAGTTTCAAG-ATAAGGAAG-TTGAACAAGAGAG 428
||| ||||||| | |||| | | || ||| || |||||| || |||||||||||||
Sbjct 460 GAAA-TATGGATATATGGA-G--G---AGGTTC-AGAATAAGG-AGATTGAACAAGAGAG 510
Query 429 AAGAATTGAGGAAAGG-TCGGTGGAGGATAGATTCTATG-T--CGAA--GAA---A--G- 476
||| ||||| |||||| || |||||||||| |||||||| | ||| ||| | |
Sbjct 511 AAGGATTGA-GAAAGGATCTGTGGAGGATATATTCTATGTTGAAGAAGGGAAGTTACCGA 569
Query 477 --A--AGAGGTGGATCCTCGGAGGAATCACCA-TT--T-G-GTG--TGT--TTGGAGGGA 523
| |||||||||| | | |||||||| | || | | | | ||| ||||| | |
Sbjct 570 ATACTAGAGGTGGATTCACTGAGGAATCGTTACTTGGTGGAGAGAATGTCATTGGAAGTA 629
Query 524 AT-GA-A-GTTAAG-TTTCCTTGGGAGAAGGTGAGTTCTATGGAGAAGAAGGAGTTGGTA 579
|| || | ||| | ||||||||||||||| ||||| ||| |||||||||||||||||
Sbjct 630 ATGGAGATGTT-GGTTTTCCTTGGGAGAAGATGAGTGCTAAGGAGAAGAAGGAGTTGG-- 686
Query 580 AATGGAGAGTGGACAGCGAAGAAGGAGAGTAGATACTTGTTGGCGGAGAGGACTCTTTCG 639
|| | |||||||| || |||||||||| |||||||| ||||||||| | ||||||| ||
Sbjct 687 AA-GCTGAGTGGACCGCAAAGAAGGAGAATAGATACTCGTTGGCGGAAATGACTCTTCCG 745
Query 640 GAATCTGAGCTGAA-TCGGTTGAGGAATGTGATGTTTCGAGCGA-AGAGTAAGATGA-GA 696
||||| ||||| || ||||||||||| ||| |||| || | | ||| ||||||| ||
Sbjct 746 GAATCAGAGCT-AAGGAGGTTGAGGAATTTGACGTTTAGAAC-AGCGAGCAAGATGAGGA 803
Query 697 GTTACG-GGTGCAGGTGTTACTCAGGCT-GTGGTAGATGCAATTCAGGAGAAGTGGAAGA 754
|| || |||| |||||| ||||||| | | || ||||| ||| ||||||||||||| |
Sbjct 804 -TT-CGAGGTGGAGGTGTGACTCAGG-TGGCAGTGGATGCTATTAAGGAGAAGTGGAAAA 860
Query 755 GCTCAGAGATTGTGAGACTT-AAGATTGAAGGAGCAAGTGCCCTAAACATGAGAAGGATG 813
|| |||||||||||||| || ||||||||||||||||| || || |||||||||| ||||
Sbjct 861 GCGCAGAGATTGTGAGA-TTGAAGATTGAAGGAGCAAGCGCGCTTAACATGAGAAAGATG 919
Query 814 CATGAGATATTAGAGAGAAAAACTGGTGGTTTGGTGATTTGGAGGTCAGGAACTTCCATC 873
|||||||||||||||| ||||||||||||||| |||||||||||||| || |||||||||
Sbjct 920 CATGAGATATTAGAGAAAAAAACTGGTGGTTTAGTGATTTGGAGGTCCGGGACTTCCATC 979
Query 874 GCATTGTACAATTACAAAGGTGGCAG-TAACAGGGATGGATCAGGGAATAT-GATCAAGC 931
| || | |||| ||||| ||| || | | | |||| |||| || || |||||
Sbjct 980 TC-TT-T----GTACAGAGGTGTCAGTTATGA-GCTTCCATCA-GGAAAATGGAACAAGC 1031
Query 932 GAATATACAGAAGAGCAGA-G--ACAT--TGCCGT-CTTCCTTACC-T-ACG-AA-TACA 981
|| | | || |||| ||| | || | || || | ||| | ||| || ||||
Sbjct 1032 -AA-AGA-AG-AGAGGAGACGCCACCTGAAGCTGTAATAGAGAACCATGACGAAACTACA 1087
Query 982 AGTACAGTGGATCAAAGTGTTCAACTAGTGCATTTTCCTCAGCTAGAGAAGGAGCCAAC- 1040
| || |||||| |||||| | || ||| ||| ||||||| ||||| ||||| ||||
Sbjct 1088 ACTATGGTGGATAAAAGTGATGAAAAAGTTCATCTTCCTCAATTAGAGCAGGAGACAACT 1147
Query 1041 CGTTGTGGGAAATAAAGA-CACGACATCTCCACAAGAAGTAGAATATGAAGATGAAATAA 1099
| ||||| ||| ||||| || ||||||| | | || ||||||||||||||||||| |
Sbjct 1148 AG-TGTGGAAAAGAAAGACCA-GACATCT-C-C-AGTAGTAGAATATGAAGATGAACTTG 1202
Query 1100 ATGAACTGTTAGAGGGCCTTGGTCCTCGGTACACAGACTGGCAGGGAGGTTATCCGTTAC 1159
||||||||||||| | ||||||||| ||| || ||||||| ||||| | |||| ||||
Sbjct 1203 ATGAACTGTTAGATGATCTTGGTCCTAGGTTCATGGACTGGCCGGGAGATAATCCATTAC 1262
Query 1160 CTGTTGATGCTGATTTGCTTCCTGG-GATCGTTCCTGGTTATGAACCCCCTTTTAGGGTA 1218
|||| ||||||||||||||||| || | | |||||| ||||||||| ||||| ||||||
Sbjct 1263 CTGTAGATGCTGATTTGCTTCCAGGCG-CCATTCCTGATTATGAACCGCCTTTCAGGGTA 1321
Query 1219 CTTCCTTATGGAGTGAGATCAACTCTGGGAACAAAGGAGGCTACCTCTTTAAGAAGAATT 1278
|||||||||||||| |||||| |||||||| |||||||||| || |||| |||||| ||
Sbjct 1322 CTTCCTTATGGAGTAAGATCATCTCTGGGACCAAAGGAGGCAACAGCTTTGAGAAGACTT 1381
Query 1279 GCCACAGT-TCTTCCTCCACACTTTGCTTTAGGTCGAAGTAGACAGCTGCAAGGGTTGGC 1337
|||| | | | ||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct 1382 GCCAGA-TCTATTCCTCCACACTTTGCTTTAGGTCGAAGTAGGCAGCTCCAAGGCTTGGC 1440
Query 1338 AACAGCCATGGTTAAGTTATGGCAAAAGAGTTTGATTGCCAAGGTTGCCCTTAAACGGGG 1397
||||| ||||| | ||||||| |||||||| || |||| ||| |||| ||||||| ||
Sbjct 1441 GACAGCAATGGTCAGGTTATGGGAAAAGAGTATGCTTGCAAAGATTGCTATTAAACGTGG 1500
Query 1398 TGTACAACTGA-CTACCAGCGAGAGAATGGCTGAGGA-CATCAAG 1440
|| ||| | | ||||||| |||||||||||||| || | |||||
Sbjct 1501 CGTGCAA-TCAACTACCAGTGAGAGAATGGCTGAAGATC-TCAAG 1543
Score = 215 bits (116), Expect = 2e-54
Identities = 161/183 (88%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 1482 ATTGACTGGAGGTATGCTGCTCTCGAGGAACAAAGATTTCTTGGTTTTCTACAGAGGAAA 1541
|||||| |||||||| ||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct 1546 ATTGACAGGAGGTATAATGCTCTCTAGGAATAAAGACTTCTTGGTTTTCTACAGAGGAAA 1605
Query 1542 GAATTTTTTGTCACTAGAAGTAGCTGAAGCATTAATGGAGAAGGAGAGGCTTGTAAGGAC 1601
||||||||| ||| |||||||||||| ||||| ||||| |||||||| ||||||||||
Sbjct 1606 GAATTTTTTATCAAGAGAAGTAGCTGACGCATTGGTGGAGCAGGAGAGGTTTGTAAGGAC 1665
Query 1602 TTTGCAAGACGAAGAGGAACAAGCACGTCTAAG-GGCATCATCGGCTCTGGTTGTCCCAA 1660
||||||||||||||| || || |||||| |||| || |||||||||||| |||||||||
Sbjct 1666 TTTGCAAGACGAAGAAGAGCAGGCACGTTTAAGAGGT-TCATCGGCTCTGATTGTCCCAA 1724
Query 1661 GTA 1663
|||
Sbjct 1725 GTA 1727
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137106255219
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5