BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg330113
Length=3174
Score E
Sequences producing significant alignments: (Bits) Value
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superf... 2630 0.0
AT4G14040.1 | Symbols: EDA38, SBP2 | selenium-binding protein 2... 1323 0.0
AT4G14030.1 | Symbols: SBP1 | selenium-binding protein 1 | chr4... 763 0.0
AT3G23800.1 | Symbols: SBP3 | selenium-binding protein 3 | chr3... 414 2e-114
> AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:8103645-8105521 REVERSE LENGTH=1877
Length=1877
Score = 2630 bits (1424), Expect = 0.0
Identities = 1577/1652 (95%), Gaps = 5/1652 (0%)
Strand=Plus/Plus
Query 1 ATGCCTCACAGAGACCACATCGCCTGGGCCTCGGTTCTCACAGCTCTTAATCAAGCGAAT 60
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 228 ATGCCTCATAGAGATCACATCGCCTGGGCCTCGGTTCTCACAGCTCTTAATCAAGCCAAT 287
Query 61 CTCTCTGGTAAGACTCTCTGGGTCTTTTCTTCAGTGGGTTCGAGCTCTGGGTTGCGTCCT 120
|||||||||||||| || | || ||||||||||||||||||||||||||||||||||||
Sbjct 288 CTCTCTGGTAAGACACTATCAGTATTTTCTTCAGTGGGTTCGAGCTCTGGGTTGCGTCCT 347
Query 121 GATGATTTTGTGTTCTCGGCTCTTGTTAAGGCTTGTGCTAACTTAGGATCTATTAAGCTC 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct 348 GATGATTTTGTGTTCTCGGCTCTTGTTAAGGCTTGTGCTAACTTAGGATCTATTGATCAC 407
Query 181 GGGAAGCAAGTTCATTGCCATTTTATAGTCTCTGAGTATTTC-AATGATGATGTTGTTAA 239
|||| ||||||||||||||||||||||||||||||||| | | |||||||| ||||||||
Sbjct 408 GGGAGGCAAGTTCATTGCCATTTTATAGTCTCTGAGTA-TGCTAATGATGAAGTTGTTAA 466
Query 240 GTCTTCACTGGTTGATATGTATGCTAAATGTGGGTTGCTCGATAGCGCTAAAGTAGTTTT 299
||||||||||||||||||||||||||||||||| ||||| |||| ||||||| ||||||
Sbjct 467 GTCTTCACTGGTTGATATGTATGCTAAATGTGGATTGCTTAATAGTGCTAAAGCAGTTTT 526
Query 300 TGATTCTATAAGAGGGAAAAACACCATTTCATGGACTGCAATGGTATCTGGATATGCGAA 359
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 527 CGATTCTATAAGAGTGAAAAACACCATTTCATGGACTGCAATGGTATCTGGATATGCTAA 586
Query 360 AAGCGGAAGAAAGGAAGAAGCTTTGGAGCTTTTTAGGAGATTACCAGTCAAGAATTTGTA 419
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 587 AAGCGGAAGAAAGGAAGAAGCTTTGGAGCTTTTTAGGATATTACCAGTCAAGAATTTGTA 646
Query 420 TTCTTGGACTGCATTGATCTCTGGTTTTGTACAGAGTGGGAAAGGTCTTGAAGCTTTTTC 479
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 647 TTCTTGGACTGCGTTGATCTCTGGTTTTGTACAGAGTGGGAAAGGGCTTGAAGCTTTTTC 706
Query 480 TGTGTTCACTGAAATGAGGAGAGAAAGAGTTGACATTTTGGATCCCTTAGTTCTTTCGAG 539
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 707 TGTTTTCACTGAAATGAGGAGAGAAAGAGTTGACATTTTGGATCCTTTAGTTCTTTCGAG 766
Query 540 TATTGTTGGTGCTTGTGCTAATTTGGCAGCTTCAATAGCGGGGAGGCAGGTTCACGGTTT 599
|| ||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||
Sbjct 767 CATCGTTGGCGCTTGTGCTAATTTGGCAGCTTCTATAGCGGGGAGGCAGGTTCATGGGTT 826
Query 600 GGTTATAGCTTTAGGATTTGATTCTTGTGTGTTTATTAGTAATGCGCTTATCGATATGTA 659
|||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 827 GGTTATAGCTCTAGGATTTGATTCTTGTGTGTTTATTAGTAACGCCCTTATCGATATGTA 886
Query 660 TGCTAAATGCAGCGATGTTATAGCTGCAAAGGATATTTTCAGTAGAATGCGCCACAGAGA 719
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 887 CGCTAAATGCAGCGATGTTATAGCTGCAAAGGATATTTTCAGTAGGATGCGTCACAGAGA 946
Query 720 TGTAGTTTCATGGACATCGCTTATAGTTGGAATGGCTCAGCACGGGCAGGCTGAGAAGGC 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 947 TGTAGTTTCATGGACATCGCTTATAGTTGGAATGGCTCAGCACGGGCAGGCTGAGAAGGC 1006
Query 780 ATTGGCTTTGTATGATGACATGGTTTCTCACGGTGTAAAGCCCAATGAGGTCACATTTGT 839
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1007 ATTAGCGTTGTATGATGACATGGTTTCTCACGGTGTAAAGCCCAATGAGGTCACATTTGT 1066
Query 840 TGGGTTGATATACGCGTGTAGCCATGTCGGTTTTGTAGCTAAAGGCCGTGAGCTTTTCCA 899
|||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 1067 TGGGTTGATATATGCGTGTAGCCATGTCGGTTTTGTTGAGAAAGGCCGTGAGCTTTTCCA 1126
Query 900 ATCAATGACCAAGGACTACGGAATTCGCCCATCCTTGCAGCATTATACATGCTTATTGGA 959
||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1127 ATCAATGACTAAGGACTATGGAATTCGCCCATCTTTGCAGCATTATACATGCTTATTGGA 1186
Query 960 TCTTCTTGGTCGGTCTGGACTCCTTGATGAGGCTGAGAACTTAATTCATACAATGCCGTT 1019
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1187 TCTTCTCGGTCGCTCTGGACTCCTTGATGAGGCTGAGAACTTAATTCATACAATGCCGTT 1246
Query 1020 TCCTCCAGATGAACCAACATGGGCTGCTCTACTTAGTGCCTGTAAGCGCCAGGGACAAGG 1079
|||||||||||||||||||||||||||| ||||||| || || ||||||||||||| |||
Sbjct 1247 TCCTCCAGATGAACCAACATGGGCTGCTTTACTTAGCGCTTGCAAGCGCCAGGGACGAGG 1306
Query 1080 TCAGATGGGTGTAAGAATCGCTGATCATCTCGTAAGCAGCTTTAAACCGAAAGATCCATC 1139
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1307 TCAGATGGGTATAAGAATCGCTGATCATCTCGTAAGCAGCTTTAAACTGAAAGATCCATC 1366
Query 1140 AACTTATATACTTCTATCAAACATCTATGCAAGTGCTTCTTTGTGGGGAAAAGTATCGGA 1199
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1367 GACTTATATACTTTTATCAAACATCTATGCAAGTGCTTCTTTGTGGGGAAAAGTATCAGA 1426
Query 1200 AACAAGAAGGAAACTAGGA-AACATGGAAGTTAGAAAAGATCCAGGGTACAGTAGCGTTG 1258
| ||||||||||||||||| || |||||||||||||| ||||||||| |||||||||| |
Sbjct 1427 AGCAAGAAGGAAACTAGGAGAA-ATGGAAGTTAGAAAGGATCCAGGGCACAGTAGCGTCG 1485
Query 1259 AGGTACGGAAAGAAACCGAAGTGTTTTACGCAGGAGAAACATCTCATGCTCTAAAAGAAG 1318
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1486 AGGTACGGAAAGAAACCGAAGTGTTTTACGCAGGAGAAACATCTCATCCTCTAAAAGAAG 1545
Query 1319 ACATCTTTCGATTGCTTAAGAAGCTAGAGGAAGAAATGAGGATAAGAAATGGTTATGTTC 1378
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1546 ACATTTTTCGATTGCTTAAGAAGCTAGAGGAAGAAATGAGGATAAGAAATGGTTATGTTC 1605
Query 1379 CTGATACTAGTTGGATCCTACACGACATGGATGAGCAAGAGAAAGAAAAGCTTTTGTTTT 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1606 CTGATACTAGTTGGATCCTACACGACATGGATGAGCAAGAGAAAGAAAAGCTTTTGTTTT 1665
Query 1439 GGCATAGCGAACGATCCGCTGTTGCATACGGATTGCTTAAAGCTGTTCCGGGAACTCCAA 1498
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1666 GGCATAGCGAACGATCCGCTGTTGCATACGGATTGCTTAAAGCTGTTCCGGGAACTCCTA 1725
Query 1499 TACGAATTGTGAAAAATCTAAGGGTTTGTGGAGATTGTCATGTTGTTCTGAAACATATAA 1558
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1726 TACGGATTGTGAAAAATCTAAGGGTTTGTGGAGATTGTCATGTTGTTCTGAAACATATAA 1785
Query 1559 GTGAAATTACAGAAAGAGAGATTATAGTTCGAGATGCGACTAGATATCATCATTTTAAGG 1618
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1786 GTGAGATTACAGAAAGAGAGATTATAGTTAGAGATGCGACTAGATATCATCATTTTAAGG 1845
Query 1619 GAGGAAAATGTTCCTGCAATGACTTCTG-TAA 1649
|||||||||||||||||||||||||||| |||
Sbjct 1846 GAGGAAAATGTTCCTGCAATGACTTCTGGTAA 1877
> AT4G14040.1 | Symbols: EDA38, SBP2 | selenium-binding protein
2 | chr4:8100349-8102875 REVERSE LENGTH=1853
Length=1853
Score = 1323 bits (716), Expect = 0.0
Identities = 839/897 (94%), Gaps = 14/897 (2%)
Strand=Plus/Plus
Query 1701 GAGACGTGTAGCTTCACTACTTCCACATACTGAGAGTGAGAGAGAAATGGCGACGGAAAC 1760
||||||||||||||||||| |||||||||| | ||||||||||||| || |||||
Sbjct 8 GAGACGTGTAGCTTCACTAATTCCACATAC------TCAGAGAGAAATGGCAACCGAAAC 61
Query 1761 CGTATTGGCCACGGCGGTGAGCAACGGCAGAAGCAAAGGATGTTGCAAGTCCGGTCCAGG 1820
|||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct 62 CGTATTAGCCACGGCGGTGAGCAATGGCAAAAGCAAAGGATGTTGCAAGTCCGGTCCAGG 121
Query 1821 TTACGCGACGCCTCTAGCCGCCATGGCTGGTCCACGGGAAAAGCTCATCTATCTCACCGC 1880
||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| ||
Sbjct 122 TTACGCGACGCCTCTCGCCGCCATGGCCGGTCCACGGGAAAAGCTCATCTATGTCACTGC 181
Query 1881 CCTCTACTCCGGAACGGGGCGAGACAAACCGGACTACTTGGCGACGGTGGATGTGGATCC 1940
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 182 CCTTTACTCCGGAACGGGGCGAGACAAACCGGACTACTTGGCAACGGTGGATGTGGATCC 241
Query 1941 TAA-CTCACCCACATATTCAAGTGTCATTCACAGGTTGAAAATGCCTTATATAGGTGATG 1999
|| ||||||||||| |||||| ||||||||||| | |||||||| |||||||| ||||
Sbjct 242 -AAGCTCACCCACATTTTCAAGCGTCATTCACAGACTAAAAATGCCATATATAGGAGATG 300
Query 2000 AGCTTCACCACACTGGTTGGAACTCTTGCAGCTCTTGCCATGGTGATGCTTCTGCTGATA 2059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 AGCTTCACCACACTGGTTGGAACTCTTGCAGCTCTTGCCATGGTGATGCTTCTGCTGATA 360
Query 2060 GACGTTACCTCGTCTTACCAGGCTTAATCTCTGGTCGCATTTATGCAATCGACACAAAGA 2119
|||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 361 GACGTTACCTTGTCTTACCAGGCTTAATTTCTGGTCGCATCTATGCAATCGACACAAAGA 420
Query 2120 CCGACCCAAAGGCTCCATCTTTGTACAAGGTTGTAGAGCCTGAAG-AGATTGCTaaaaaa 2178
|||||||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||
Sbjct 421 CCGACCCAAAGGCTCCGTCTTTGTACAAGGTTGTAGAGCCT-AAGGAGATTGCTGAAAAG 479
Query 2179 aCAGGATTAGCATTTCCACATACATCTCATTGCCTCGCCTC-GGGTGATATGTTGGTGTC 2237
||||||||||||||||||||||||||||||||||| || || ||| ||||||||||||||
Sbjct 480 ACAGGATTAGCATTTCCACATACATCTCATTGCCTAGCTTCAGGG-GATATGTTGGTGTC 538
Query 2238 TTGCCTTGGGGACAAAGAAGGAAACGCCAAAGGGAACGGGTTTCTCCTT-CTTGACTCTG 2296
|||||||||||||||||||||||||||||||||||||||||||| || || |||||||
Sbjct 539 ATGCCTTGGGGACAAAGAAGGAAACGCCAAAGGGAACGGGTTTCTT-TTGCTAGACTCTG 597
Query 2297 ACTTCAATGTCAAAAGCAGGTGGGACAAACCAGGACATGGTCCTTTGTTTGGGTATGATT 2356
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 598 ACTTCAATGTCAAAAGCAGGTGGGACAAACCAGGACATGGTCCTTTGTTTGGTTATGATT 657
Query 2357 TTTGGTACCAACCTCGGTTCAAGACAATGATCAGCACTTCTTGGGGTGCGCCTAAAGCCT 2416
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 658 TTTGGTACCAACCTCGGTTCAAGACCATGATCAGCACTTCTTGGGGTGCACCTAAAGCCT 717
Query 2417 TCTCCAAAGGTTTCAATCTCCAGCACGTTGCTGATGGCTTATATGGAAGTCATTTACATA 2476
||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||||
Sbjct 718 TCTCCAAAGGTTTCAATCTCCAGCATGTTGCGGATGGCTTGTATGGAAGTCATTTGCATA 777
Query 2477 TTTATAAATGGCCTGAAGGTGAAATGAAGCAGATTATTGACCTCGGAAATACCGGTCTCT 2536
||||| |||||||||||||||||||||| ||||| |||||||| ||||||||||||||||
Sbjct 778 TTTATCAATGGCCTGAAGGTGAAATGAAACAGATAATTGACCTTGGAAATACCGGTCTCT 837
Query 2537 TACCTCTTGAGATTAGATTCTTGCATGATCCTTCTAAAGATACAGGGTATGTCGGGA 2593
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 838 TACCTCTTGAGATCAGATTCTTGCATGATCCTTCTAAAGATACAGGGTATGTTGGGA 894
Score = 887 bits (480), Expect = 0.0
Identities = 550/583 (94%), Gaps = 8/583 (1%)
Strand=Plus/Plus
Query 2594 TGATGACACATGGAGCCATGAGGCAAGTGGTTATATCGGTTAAACC-TCTGAAAGTTGAA 2652
||||||||| ||||||||||| | || ||||||||||||||||| | ||||||| |||
Sbjct 935 TGATGACACGTGGAGCCATGA-G---GTTGTTATATCGGTTAAACCGT-TGAAAGTCGAA 989
Query 2653 AACTGGATTCTTCCAGAAATGCCGGGGCTTATCACCGACTTCTTGATCTCCCTCGATGAC 2712
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 990 AACTGGATACTTCCAGAAATGCCGGGGCTTATCACCGACTTCTTGATCTCCCTCGATGAC 1049
Query 2713 CGGTTTTTCTACTTTGTGAACTGGCTTCATGGAGACATCCGTCAGTACAACATCGAAGAC 2772
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1050 CGGTTTTTCTACTTTGTGAACTGGCTTCATGGAGACATTCGTCAGTACAACATCGAAGAC 1109
Query 2773 CCTAAAAACCCGGTCTTAACGGGACAAATTTGGGTCGGAGGATTACTACAAAAGGGTAGT 2832
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1110 CCTAAAAACCCGGTCTTAACCGGACAAATATGGGTCGGAGGATTACTACAAAAGGGTAGT 1169
Query 2833 CCTTACAAGGCTGTTGGAGAAGATGGTAACACTTACCAATTTGACGTTCCGCAGATCAAG 2892
||||| ||||||||||||||||||||||| ||||||||||| || ||||| |||||||||
Sbjct 1170 CCTTATAAGGCTGTTGGAGAAGATGGTAATACTTACCAATTCGATGTTCCTCAGATCAAG 1229
Query 2893 GGGAAGTCTCTACGAGCAGGACCTTAGATGATCCAACTAAGCCTCGACGGGAAAAGATTG 2952
|||||||||||| ||||||||||| ||||||||||||||||||| || |||||||||||
Sbjct 1230 GGGAAGTCTCTAAGAGCAGGACCTCAGATGATCCAACTAAGCCTAGATGGGAAAAGATTA 1289
Query 2953 TACGCGACAAACTCGCTATTTAGCGCGTGGGACCGTCAGTTTTACCCGGAACTCATGGAT 3012
|| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 1290 TATGCGACAAACTCGCTATTTAGCGCATGGGACCGTCAGTTTTACCCGGAAATCATGGAG 1349
Query 3013 AAAGGCTCACACATCATTCAAATCGATGTTGACACAGACAAAGGTGGTCTCAC-CATAAA 3071
|||||||||||||| ||||||||||||||||| |||||||||||||||||||| | ||||
Sbjct 1350 AAAGGCTCACACATAATTCAAATCGATGTTGATACAGACAAAGGTGGTCTCACTC-TAAA 1408
Query 3072 CCCTGACTTCTTTGTGGACTTTGGTGATGAACCAGACGGTCCTGCACTAGCCCACGAGAT 3131
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1409 CCCTGACTTCTTTGTGGACTTTGGTGATGAACCAGACGGTCCTGCACTAGCTCACGAGAT 1468
Query 3132 GAGATATCCCGGTGGAGACTGCACTTCCGATATCTGGATCTGA 3174
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1469 GAGATATCCCGGCGGAGACTGCACTTCCGATATCTGGATCTGA 1511
> AT4G14030.1 | Symbols: SBP1 | selenium-binding protein 1 | chr4:8097918-8100242
REVERSE LENGTH=1753
Length=1753
Score = 763 bits (413), Expect = 0.0
Identities = 741/896 (83%), Gaps = 36/896 (4%)
Strand=Plus/Plus
Query 1719 ACTTCCACATACTGAGAGTGAGAGAGAAATGGCGACGGAAACCGTA-TTG--GC-CACGG 1774
|||| |||||| ||||| || ||||| |||||||||||||| | | ||| || | |||
Sbjct 53 ACTT-CACATA--GAGAGAGATAGAGAGATGGCGACGGAAACGGAAGTTGTAGCTC-CGG 108
Query 1775 ---CGGTGAGCAACGGCAGAAGCAAAGGATGTTGCAAGT-C--CGGTCCAGGTTACGCGA 1828
|||| ||||||||| ||||||||||||||||||||| | ||||| ||||||||||
Sbjct 109 TAACGGTAAGCAACGGCGGAAGCAAAGGATGTTGCAAGTACGGTGGTCCTGGTTACGCGA 168
Query 1829 CGCCTCTAGCCGCCATGGCTGGTCCA-CGGGA-AAAGCTCATCTATC-TCACCGCCCTCT 1885
| ||||| ||||| ||| |||||||| | ||| ||| || ||||| | | |||||| |||
Sbjct 169 CTCCTCTCGCCGCTATGTCTGGTCCATC-GGAGAAA-CTTATCTA-CGTAACCGCCGTCT 225
Query 1886 ACTCCGGAACGGGGCGAGACAAACCGGACTACTTGGCGACGGTGGATGTGGATCCTAA-C 1944
|| ||||||| || ||| |||||||| || ||||||||||||||||| ||||| || |
Sbjct 226 ACACCGGAACTGGAATAGATAAACCGGATTATTTGGCGACGGTGGATGTAGATCC-AAGC 284
Query 1945 TCACCCACATATTCAAGTGTCATTCACAGGTTGA-AAATGCCTTATATAGGTGATGAGCT 2003
|| || | ||||||||||| ||||| || || | |||||||| | | |||||||||||
Sbjct 285 TCGCCTTCGTATTCAAGTGTTATTCATAGATT-ACCAATGCCTTTTGTTGGTGATGAGCT 343
Query 2004 TCACCACACTGGTTGGAACTCTTGCAGCTCTTGCCATGGTGATGCTTCTGCTGATAGACG 2063
||| || |||||||||||||||| || |||||||||||||||||||||| |||||||||
Sbjct 344 TCATCATTCTGGTTGGAACTCTTGTAGTTCTTGCCATGGTGATGCTTCTGTTGATAGACG 403
Query 2064 TTACCTCGTCTTACCAGGCT-TAATCTCTGGTCGCATTTATGCAATCGACAC-AAAGACC 2121
||| ||||| ||||| | || | || ||||||||||||||||| || || || || ||
Sbjct 404 TTATCTCGTGTTACC-GTCTCTTATATCTGGTCGCATTTATGCGATTGATACTAAGGA-A 461
Query 2122 GACCCAAAGGCTCCATCTTTGTACAAGGT-TGTAGAGCCTGAAGAGATTGCTaaaaaaaC 2180
|||| | |||||| |||||||| || || ||| || ||| ||||||||||| | || ||
Sbjct 462 AACCCGAGGGCTCCGTCTTTGTATAA-GTATGTTGATCCTAAAGAGATTGCTGATAAGAC 520
Query 2181 AGGATTAGCATTTCCACATACATCTCATTGCCTCGCCTCGGGTGATATGTTGGTGTCTTG 2240
||||| || ||||| || || |||||||||||||| |||| || || |||||||| ||
Sbjct 521 TGGATTGGCGTTTCCTCACACGGCTCATTGCCTCGCCACGGGCGAGATCTTGGTGTCCTG 580
Query 2241 CCTTGGGGACAAAGAAGGAAACGCCAAAGGGAACGGGTTTCTCCTTCTTGACTCTGACTT 2300
||||| || |||| || || || || ||||| |||||||| |||||||||||||| ||
Sbjct 581 TCTTGGAGATGAAGAGGGGAATGCTAAGGGGAATGGGTTTCTTCTTCTTGACTCTGATTT 640
Query 2301 CAATGTCAA-AAGCAGGTGGGACAAACCAGGACATGGTCCTTTGTTTGGGTATGATTTTT 2359
|| |||| || |||||||| |||||||||||| ||||||||| ||||||||||||||
Sbjct 641 TAACATCAAGAA-TAGGTGGGAGAAACCAGGACATAGTCCTTTGTATGGGTATGATTTTT 699
Query 2360 GGTACCAACCTCGGTTCAAGACAATGATCAGCACTTCTTGGGGTGCGCCTAAAGCCTTCT 2419
|||||||||||||| |||||| ||||||||||| |||||||| || |||||||||||||
Sbjct 700 GGTACCAACCTCGGCACAAGACCATGATCAGCACATCTTGGGGAGCACCTAAAGCCTTCT 759
Query 2420 CCAAAGGTTTCAATCTCCAGCACGTTGCTGATGGCTTATATGGAAGTCATTTACATATTT 2479
| |||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |||
Sbjct 760 CTAAAGGTTTCAATCTTCAGCACGTTGCTGATGGCTTGTATGGAAGTCATCTACATGTTT 819
Query 2480 ATAAATGGCCTGAAGGTGAAATGAAGCAGATTA-TTGACCTCGGAAATACCGGTCTCTTA 2538
||| ||||| | ||||||||| || || |||| ||||||| ||| || |||||||||
Sbjct 820 ATAGTTGGCCAGGAGGTGAAATAAAACA-ATTAATTGACCTTGGACCGACTGGTCTCTTA 878
Query 2539 CCTCTTG-AGATTAGATTCTTGCATGATCCTTCTAAAGATACAGGGTATGTCGGGA 2593
||| ||| |||||||||||||||||||||| |||||||||||||||| ||| ||||
Sbjct 879 CCT-TTGGAGATTAGATTCTTGCATGATCCATCTAAAGATACAGGGTTTGTTGGGA 933
Score = 721 bits (390), Expect = 0.0
Identities = 522/585 (89%), Gaps = 12/585 (2%)
Strand=Plus/Plus
Query 2594 TGATGACACATGGAGCCATGAGGCAAGTGGTTATATCGGTTAAACC-TCTGAAAGTTGAA 2652
|||||| |||||||||||||| | || ||||||||||||||||| | ||||||| |||
Sbjct 974 TGATGAAACATGGAGCCATGA-G---GTTGTTATATCGGTTAAACCGT-TGAAAGTCGAA 1028
Query 2653 AACTGGATTCTTCCAGAAATGCCGGGGCTTATCACCGACTTCTTGATCTCCCTCGATGAC 2712
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1029 AACTGGATACTTCCAGAAATGCCGGGGCTAATCACCGACTTCTTGATCTCCCTCGATGAC 1088
Query 2713 CGGTTT-TTCTACTTTGTGAACTGGCTTCATGGAGACATCCGTCAGTACAACATCGAAGA 2771
|| ||| || ||||||||||||||||| ||||||||||| |||||||||||||| || ||
Sbjct 1089 CGATTTATT-TACTTTGTGAACTGGCTCCATGGAGACATTCGTCAGTACAACATAGAGGA 1147
Query 2772 CCCTAAAAACCCGGTCTTAAC-GGGACAAATTTGGGTCGGAGGATTACTACAAAAGGGTA 2830
|||||||||||| || ||||| ||| ||||||||||| |||||||||||||||||||| |
Sbjct 1148 CCCTAAAAACCCTGTATTAACAGGG-CAAATTTGGGTTGGAGGATTACTACAAAAGGGCA 1206
Query 2831 GTCCT-TACAAGGCTGTTGGAGAAGATGGTAACACTTACCAATTTGACGTTCCGCAGATC 2889
||||| | ||||| ||||||||||| || ||||||| |||||| || ||||| ||||||
Sbjct 1207 GTCCTGT-TAAGGCGGTTGGAGAAGACGGAAACACTTTCCAATTCGAGGTTCCTCAGATC 1265
Query 2890 AAGGGGAAGTCTCTACGAGCAGGACCTTAGATGATCCAACTAAGCCTCGACGGGAAAAGA 2949
|||||||| ||| |||||| |||||| | ||||| || || |||||||| |||||| ||
Sbjct 1266 AAGGGGAAATCTTTACGAGGTGGACCTCAAATGATTCAGCTGAGCCTCGATGGGAAACGA 1325
Query 2950 TTGTACGCGACAAACTCGCTATTTAGCGCGTGGGACCGTCAGTTTTACCCGGAACTCATG 3009
||||| || ||||||||||| |||||||| ||||| ||||||||||| || ||| |||||
Sbjct 1326 TTGTATGCAACAAACTCGCTGTTTAGCGCATGGGATCGTCAGTTTTATCCTGAAATCATG 1385
Query 3010 GATAAAGGCTCACACATCATTCAAATCGATGTTGACACAGACAAAGGTGGTCTCACCATA 3069
|| |||||||||||||| ||||| || |||||||| ||||| ||||||||||||||||||
Sbjct 1386 GAGAAAGGCTCACACATAATTCAGATTGATGTTGATACAGAAAAAGGTGGTCTCACCATA 1445
Query 3070 AACCCTGACTTCTTTGTGGACTTTGGTGATGAACCAGACGGTCCTGCACTAGCCCACGAG 3129
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1446 AACCCTGATTTCTTTGTGGACTTTGGTGATGAACCAGACGGTCCTTCACTAGCCCACGAG 1505
Query 3130 ATGAGATATCCCGGTGGAGACTGCACTTCCGATATCTGGATCTGA 3174
||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 1506 ATGAGATATCCAGGTGGAGACTGCACTTCCGATATCTGGATTTGA 1550
> AT3G23800.1 | Symbols: SBP3 | selenium-binding protein 3 | chr3:8581654-8583835
FORWARD LENGTH=1621
Length=1621
Score = 414 bits (224), Expect = 2e-114
Identities = 469/586 (80%), Gaps = 22/586 (4%)
Strand=Plus/Plus
Query 2592 GATGATGACACATGGAGCCATGAGGCAAGTGGTTATATCGGTTAAACCTCTGAAAGTTGA 2651
|||||||| ||||||||||| || | |||| |||||| ||| ||||||||||||||||
Sbjct 912 GATGATGAAACATGGAGCCACGA-G---GTGGCTATATCAGTTGAACCTCTGAAAGTTGA 967
Query 2652 AAACTGGATTCTTCCAGAAATGCCGGGGCTTATCACCGACTT-CTTGATCTCCCTCGATG 2710
|||||||||||| ||||||||||| ||||||||||||||||| || ||||| || || |
Sbjct 968 AAACTGGATTCTCCCAGAAATGCCAGGGCTTATCACCGACTTTCTA-ATCTCACTTGACG 1026
Query 2711 ACCGGTTTTTCTACT-TTGTGAACTGGCTTCATGGAGACATCCGTCAGTACAACATCGAA 2769
|||| || |||| | || ||||||||||||||||| || |||||||||||||||||
Sbjct 1027 ACCGATTCCTCTATTGTTCC-AACTGGCTTCATGGAGATATTCGTCAGTACAACATCGAG 1085
Query 2770 GACCCTAAAAACCCGGTCTTAACGGGACAAATTTGGGTCGGAGGATTACTACAAAAGGGT 2829
||||| |||| ||| || ||||| || ||||| || || || || | ||||||||
Sbjct 1086 GACCCGAAAACCCCTGTTTTAACTGGTCAAATACATGTAGGCGGGCTAGTCCAAAAGGGA 1145
Query 2830 AGTCCT-TACAAGGCTGTT-GGAGAAGATGGTAA--CACTTACCAATTTGACGTTCCGCA 2885
|||| | | | ||| || |||||||| || || || || | | ||||| || || |
Sbjct 1146 AGTCTTGT-CTTGGCC-TTAGGAGAAGAAGGAAAAGCATTT-C-AGTTTGATGTCCCTAA 1201
Query 2886 GATCAAGGGGAAGTC-TCTACGAGCAGGACCTTAGATGATCCAACTAAGCCTCGACGGGA 2944
||||||||| || | |||| ||| ||| ||| ||||| | || || ||||| || ||||
Sbjct 1202 GATCAAGGGTCAG-CGTCTAAGAGGAGGTCCTCAGATGTTTCAGCTGAGCCTAGATGGGA 1260
Query 2945 AAAGATTGTACGCGACAAACTCGCTATTTAGCGCGTGGGACCGTCAGTTTTACCCGGAAC 3004
| ||||||||| ||| |||||||| ||||| | |||||| | ||||||||||||||||
Sbjct 1261 AGCGATTGTACGTGACGAACTCGCTGTTTAGTGTTTGGGACAGACAGTTTTACCCGGAAC 1320
Query 3005 TCATGGATAAAGGCTCACACATCATT-CAAATCGATGTTGACACAGACAAAGGTGGTCTC 3063
| |||| ||||| |||||||| || || || |||||||| ||||| ||||||||||||
Sbjct 1321 TTGTGGAGAAAGGGTCACACATG-TTGCAGATAGATGTTGATACAGATAAAGGTGGTCTC 1379
Query 3064 ACCATAAACCCTGACTTCTTTGTGGACTTTGGTGAT-GAACCAGACGGTCCTGCACTAGC 3122
||||||||||| ||||||| || |||||||| || ||||| || |||||| | || ||
Sbjct 1380 TCCATAAACCCTAACTTCTTCGTCGACTTTGG-GACCGAACCGGATGGTCCTTCGCTCGC 1438
Query 3123 CCACGAGATGAGATATCCCGGTGGAGACTGCACTTCCGATATCTGG 3168
||||||||||||||||| ||||| |||||||| || |||||||||
Sbjct 1439 TCACGAGATGAGATATCCGGGTGGCGACTGCACCTCAGATATCTGG 1484
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 157875369621
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5