BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg330172 Length=2319 Score E Sequences producing significant alignments: (Bits) Value AT5G35180.4 | Symbols: | Protein of unknown function (DUF1336)... 2001 0.0 > AT5G35180.4 | Symbols: | Protein of unknown function (DUF1336) | chr5:13424418-13433018 FORWARD LENGTH=2787 Length=2787 Score = 2001 bits (1083), Expect = 0.0 Identities = 1160/1198 (97%), Gaps = 2/1198 (0%) Strand=Plus/Plus Query 1118 CATCCACTTGGGAAATCAGAAGCTTGAAAAAGCGCAGCGATGCAGAAACTCCAAGTTGTC 1177 |||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 1355 CATCAACTTGGGAAATCAAAAGCTTAAAAAAGCGCAGCGATGCAGAAACTCCAAGTTGTC 1414 Query 1178 TTGTAACACACATGCTAGAAATCCACTCTAAACGTTGGTGCAAATGGAAGAGGACTAGCT 1237 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1415 TTGTAACACACATGCTAGAAATCCACTCTAAACGTTGGTGCAAATGGAAGAGGACCAGCT 1474 Query 1238 ACTCAAAGTTTGAAAAGACTATTCCATATGCATTACTCCTCCAAGTAGCAGGTCTGAAGG 1297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1475 ACTCAAAGTTTGAAAAGACTATTCCATATGCATTACTCCTCCAAGTAGCAGGTCTGAAGG 1534 Query 1298 AGTACATTGGAGCAAACCCAGCCTTCAAGTATGAAACTTTCGCTACGGTTGTCCAGTCCA 1357 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct 1535 AGTACATTGGAGCAAACCCAGCCTTCAAGTATGAAACTTCCGCCACGGTTGTCCAGTCCA 1594 Query 1358 AGTTCCCAGATATCCCTAATGGTGAATATGTAGATGAAGAAATGGAGGAGCAGTTTTATG 1417 |||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1595 AGTTCCAAGATGTCCCCAATGGTGAATATGTAGATGAAGAAATGGAGGAGCAGTTTTATG 1654 Query 1418 ATGCCACGGACTCATCATCT-GATGAAGAGGATGAGGAGGAAAGCGATGAAGATGATGAA 1476 |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct 1655 ATGCCACGGACTCATCATCTGGA-GAAGAGGATGAGGAGGAAAGCGATGACGATGATGAA 1713 Query 1477 GATCAGGACAATAAGGAGATTAAAGTTAAACTGAAGAATGTTTCATGGGCAATCGCTAGC 1536 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1714 AATCAGGACAATAAGGAGATAAAAGTTAAACTGAAGAATGTTTCATGGGCAATCGCTAGC 1773 Query 1537 TTATCTTTGAAGCGACCTAAAGCTCCAGGCGCAAGTAATGTATTAGACGCTAGTGTTGAT 1596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1774 TTATCTTTGAAGCGACCTAAAGCTCCAGGCGCAAGTAATGTATTAGACGCTAGTGTTGAT 1833 Query 1597 CCTGTGAGTATCGATCCAAGTCAGTTCCAAGGATCTCTGCGCAAAGGAAATGGTGATAAA 1656 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1834 CCTGTGAGTATCGATCCAAGTCAGTTCCAAGGATCTCTGCGCAAAGGAAATGGTGATAAG 1893 Query 1657 GACTCAAATTGCTGGAATTCTCCTAGTGGCATGGGGTTTATGATCAGGGGAAAGACCTAC 1716 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1894 GACTCAAATTGCTGGAATTCTCCTAGTGGCATGGGGTTTATGATCAGGGGAAAGACCTAC 1953 Query 1717 CTAAAAGATAATGCAAAGGTGATGGGTGGGGAGCCCCTTCTAACACTTGTATCAGTGGAT 1776 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 1954 CTAAAAGATAATGCAAAGGTGATGGGTGGGCAGCCCCTTCTAACACTTATATCAGTGGAT 2013 Query 1777 TGGTTCAAAGTTGATAAAGCTGTAGATAACATCGCCCTGCATCCAAAATGTCTTGTCCAG 1836 |||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||| Sbjct 2014 TGGTTCAAAGTTGATAGTGCTGTAGACAACATCGCCCTGCATCCAAAATGTCTTATCCAG 2073 Query 1837 TCGGAACCTGGGAAAAAGCTGCCATTCATCCTAGTCATCAATCTTCAGGTACCAGCAAAG 1896 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 2074 TCGGAACCTGGGAAAAAGCTCCCATTCATCCTAGTCATCAATCTACAGGTACCAGCAAAG 2133 Query 1897 CCTAACTATTGTCTGGTACTCTACTATGCTTCGGATCGTCCTGTAAGCAAGTCTTCATCC 1956 |||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||| Sbjct 2134 CCTAACTATTGTCTGGTACTCTACTATGCTGCGGATCGACCTGTAAACAAGACTTCATCC 2193 Query 1957 CTGGGAAAATTTGTGGATGGGAGTGACAGTTACCGCGACGCAAGATTTAAGCTGATCCCA 2016 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 2194 CTGGGAAAATTCGTGGATGGGAGTGACAGTTACCGCGACGCAAGATTTAAGCTAATTCCA 2253 Query 2017 AGTATTGTTCAGGGATATTGGATGGTCAAGCGGGCTGTTGGAACTAAAGCCTGCCTGCTC 2076 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct 2254 AGTATTGTTCAGGGATATTGGATGGTCAAGCGGGCTGTTGGAACAAAAGCCTGCTTGCTC 2313 Query 2077 GGTAAAGCTGTAACCTGCAAGTACCTGAGGCAGGATAATTTTTTGGAGATTGATGTAGAT 2136 ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 2314 GGTAAAGCTGTGACCTGTAAGTACCTGAGGCAGGATAACTTTTTGGAGATTGATGTAGAT 2373 Query 2137 ATTGGATCATCGGCTGTTGCGAGGAGCGTTATTGGTCTGGTCCTTGGTTATGTCACAAGC 2196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2374 ATTGGATCATCGGCTGTTGCGAGGAGCGTTATTGGTCTGGTCCTTGGTTATGTCACAAGC 2433 Query 2197 CTCATTGTTGATCTCGCCATCTTGATTGAGGGAAAGGAGGAAACCGATTTGCCAGAGTAT 2256 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct 2434 CTCATTGTTGATCTCGCCATCTTGATTGAGGGAAAGGAGGAAAGCGATTTGCCCGAGTAT 2493 Query 2257 ATCCTTGGGACGGTTCGACTTAACCGAATAGAGCTGGACTCAGCCGTATCATTTGAGG 2314 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2494 ATCCTTGGGACAGTTCGACTTAACCGAATAGAGCTGGACTCAGCCGTATCATTTGAGG 2551 Score = 1099 bits (595), Expect = 0.0 Identities = 712/766 (93%), Gaps = 18/766 (2%) Strand=Plus/Plus Query 1 ATGACATCGCCTGGATCGAAGAAACTTGTTACC-TC--CGACGGATCGGAGAAGAAAGTT 57 |||||||||||||||||||||||| |||||||| | |||||||||||||||||||||| Sbjct 121 ATGACATCGCCTGGATCGAAGAAAGTTGTTACCACCGACGACGGATCGGAGAAGAAAGTT 180 Query 58 TCCGGTAATCTCGGAAAAGTTAGTTTTTCCGGAGATCTTAATGATAGTGGAAG-C--AGT 114 ||||| |||||||||||||| ||||||||||||||||||||| |||||||||| | ||| Sbjct 181 TCCGGCAATCTCGGAAAAGTAAGTTTTTCCGGAGATCTTAATCATAGTGGAAGCCATAGT 240 Query 115 ---AG-C-----CGTAGCAGCAGC-G-G-CGGCGGCGGAGAAGGAGGAACGTTTGAGTAT 162 || | |||||||||||| | | ||| || || ||||||||||||||||||||| Sbjct 241 GGAAGCCATAGTCGTAGCAGCAGCAGCGCCGGAGGTGGTGAAGGAGGAACGTTTGAGTAT 300 Query 163 TTTGGATGGGTTTATCATTTGGGTGTGAATAAGATCGGTCATGAGTACTGTAATCTTCGT 222 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TTCGGATGGGTTTATCATTTGGGTGTGAATAAGATCGGTCATGAGTACTGTAATCTTCGT 360 Query 223 TTTCTTTTCATTAGAGGCAAATATGTTGAGATGTATAAAAGAGATCCTCGCGAGAACCCA 282 || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 361 TTCCTTTTCATTAGAGGCAAATATGTTGAGATGTATAAAAGAGATCCTCATGAGAACCCA 420 Query 283 GACATTAAACCTATAAGGCGTGGTGTCATAGGGCCTACAATGATGATTGAAGAGTTAGGA 342 ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| Sbjct 421 GACATTAAACCTATAAGGCGTGGTGTCATAGGGCCGACAATGGTGATTGAAGAGCTAGGA 480 Query 343 CGTCGCAAAGTGAATCGTGGGGATGTCTATGTCATAAGGTTCTATAACCGGTTGGACGAG 402 ||||| ||||| |||| |||||||||||| || ||||||||||||||||||||||||||| Sbjct 481 CGTCGAAAAGTTAATCATGGGGATGTCTACGTTATAAGGTTCTATAACCGGTTGGACGAG 540 Query 403 TCAAGAAAAGGAGAAATTGCTTGTGCTACCGCTGGAGAAGCCGTGAAATGGGTTGAGGCT 462 ||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 541 TCAAGGAAAGGAGAAATTGCTTGTGCTACTGCTGGAGAAGCCCTGAAATGGGTTGAGGCT 600 Query 463 TTTGAGGAAGCAAAGCAGCAGGCTGAATATGCACTTTCGAGAGGTGGAAGCACAAGAACA 522 ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| Sbjct 601 TTTGAGGAAGCAAAGCAGCAGGCTGAATATGCACTATCGAGAGGCGGAAGTACAAGAACA 660 Query 523 AAGCTAAGCATGGAGGCCAACATCGATCTGGAAGGACATCGACCTAGAGTACGACGTTAT 582 ||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 661 AAGTTAAGCATGGAGGCCAACATCGATCTGGAAGGACATCGGCCTAGAGTACGGCGTTAT 720 Query 583 GCTTATGGATTAAAAAAGCTTATCCGAATTGGGCAAGGTCCAGAGACTCTTTTGAGGCAA 642 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 721 GCTTATGGATTAAAAAAGCTTATCCGAATTGGGCAAGGTCCAGAGTCTCTTTTGAGGCAA 780 Query 643 TCCTCTACCTTGGTTAATGATGTTAGGGGTGATGGTTTCTATGAGGGTGGTGACAACGGA 702 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 781 TCATCTACCCTGGTTAATGATGTCAGGGGTGATGGTTTCTATGAGGGTGGTGACAATGGA 840 Query 703 GATGCAATCGAGGCACATGAATGGAAGTGTGTTCGTACAATCAATG 748 ||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 841 GATGCAATCGAGGCACACGAATGGAAATGTGTTCGTACAATCAATG 886 Score = 590 bits (319), Expect = 2e-167 Identities = 353/370 (95%), Gaps = 0/370 (0%) Strand=Plus/Plus Query 749 GTGTTAGGATTTTTGAAGATGTGGCTAACTTCAAGGCTGGTCGAGGAGTTCTTGTGAAAG 808 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 926 GTGTTAGGATTTTTGAAGATGTTGCTAACTTCAAGGCTGGTCGAGGAGTTCTTGTGAAAG 985 Query 809 CAGTTGCTGTAGTTGAAGCTAGTGCGGATACTGTGTTCGAAGTGCTTTTGAGCATTGACA 868 | ||||||||||||||||| ||||||||||| ||||||||||| ||||||| |||||||| Sbjct 986 CCGTTGCTGTAGTTGAAGCAAGTGCGGATACCGTGTTCGAAGTACTTTTGAACATTGACA 1045 Query 869 AACATCAAAGATACGAGTGGGATGCAGTAACAGGTGATTCGGAAAAGATAGACTCATATG 928 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1046 AACATCAAAGATACGAGTGGGATGCAGTAACAGGTGATTCGGAAAAGATAGACTCATACG 1105 Query 929 AGGGCCACTATGATGTCATTTACTGCGTATACGATCCTAAATATCTTTCACGATGGCAAT 988 |||| ||||||||||||||||| ||| |||||||||||||||||||||| |||||||| | Sbjct 1106 AGGGTCACTATGATGTCATTTATTGCATATACGATCCTAAATATCTTTCGCGATGGCAGT 1165 Query 989 CGAAGAGAGATTTTGTCTTCTCTAGACAGTGGGTTCGTGGGCAAGATGGGACATATACAA 1048 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1166 CAAAGAGAGATTTTGTGTTCTCTAGACAGTGGGTTCGTGGGCAAGATGGGACATATACAA 1225 Query 1049 TCTTACAGTTTCCAGCATTGCATAAGAAACGGCCTCCAAAGTCTGGATATCGACGTACAG 1108 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 1226 TCTTACAGTTTCCAGCAGTGCATAAGAAACGGCCTGCAAAGTCTGGATATCGACGTACAG 1285 Query 1109 AAATTACGCC 1118 |||| ||||| Sbjct 1286 AAATCACGCC 1295 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 115109849685 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5