BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg330185 Length=1974 Score E Sequences producing significant alignments: (Bits) Value AT5G35390.1 | Symbols: | Leucine-rich repeat protein kinase fa... 2950 0.0 > AT5G35390.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr5:13596873-13598976 FORWARD LENGTH=2034 Length=2034 Score = 2950 bits (1597), Expect = 0.0 Identities = 1863/1991 (94%), Gaps = 19/1991 (1%) Strand=Plus/Plus Query 1 ATGCCTCCCATGCAGGCGCGTTCCTTCAGCATATACAACGTCATGGTACCACTAGTATGT 60 ||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct 46 ATGCCTCCCATGCAGGCGCGTACCCTCAGCGTATACAACGTCATGGTACCACTAGTATGT 105 Query 61 CTCCTCCTTTTCTTCTCCACACCCACTCATGGTCTTTCGGATTCCGAGGCTATCCTCAAG 120 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 106 CTCCTCCTTTTCTTCTCCACACCCACTCATGGTCTTTCAGATTCTGAGGCTATCCTCAAG 165 Query 121 TTCAAGAAATCTTTAGTTGTTGGGCAGGAAAACGCGTTGGCCTCCTGGGATGCTAAAACT 180 |||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||| | Sbjct 166 TTCAAGGAATCTTTAGTTGTTGGGCAGGAAAACGCGTTGGCCTCATGGAATGCTAAAAGT 225 Query 181 CCTCCCTGCACTTGGCCTGGTGTCTTGTGCAATAGCGGCTCCGTCTGGGGACTGCAGATG 240 ||||| ||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 226 CCTCCTTGCACTTGGTCTGGTGTCTTGTGCAATGGCGGCTCCGTCTGGAGACTGCAGATG 285 Query 241 GAGAATTTGGAGCTTTCTGGTTCCATAGACATTGAGGCATTGTCGGGTTTGACATCCTTG 300 ||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 286 GAGAACTTGGAGCTTTCTGGTTCTATAGACATCGAGGCATTGTCGGGTTTGACATCCTTG 345 Query 301 AGGACTCTAAGCTTCATGAACAACAAGTTCGGAGGGCCATTCCCTGAGTTCAAGAAACTC 360 ||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||| Sbjct 346 AGGACTCTAAGCTTCATGAACAACAAGTTTGAAGGGCCATTCCCTGACTTCAAGAAACTC 405 Query 361 GCTGCTCTCAAGTCACTCTACCTGTCTAACAATCAATTCGGAGGAGATATACCAGGGAAT 420 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct 406 GCTGCTCTCAAGTCACTCTACCTGTCAAACAATCAATTCGGAGGAGATATACCAGGGGAT 465 Query 421 GCTTTTGAAGGTATGGGGTGGTTGAAGAAGGTCCATTTGGCACAAAACAAGTTTACCGGT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 466 GCTTTTGAAGGTATGGGGTGGTTGAAGAAGGTCCATTTGGCACAAAACAAGTTTACCGGT 525 Query 481 GAAATCCCGACCTCTGTGGCCAAATTGCCCAAGCTCTTAGAACTGAGACTTGACGGGAAC 540 |||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 526 CAAATTCCGTCATCTGTGGCCAAATTGCCCAAGCTTTTAGAACTGAGACTTGACGGGAAC 585 Query 541 CAATTCACTGGACAAATACCAGAGTTTGAACATCAGCTACACTTGTTAAACCTTTCAAAC 600 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 586 CAATTCACTGGAGAGATACCAGAGTTTGAACATCAGCTACACTTGTTAAACCTTTCAAAC 645 Query 601 AATGCATTAACAGGTCCAATCCCTGAGAGTCTCAGCATGATAGATCCAAAGGTGTTTGAA 660 |||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||| Sbjct 646 AATGCATTAACAGGTCCAATACCAGAGAGTCTCAGCATGACAGATCCAAAGGTGTTTGAA 705 Query 661 GGTAATAAAGGCTTATGTGGAAAACCGCTGGAAACAGAATGTGATTCTCCTTCTAGAGAG 720 ||||| |||||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct 706 GGTAACAAAGGCTTATATGGAAAACCGCTGGAAACAGAATGTGATTCTCCTTATATAGAA 765 Query 721 CTTCCTCCACAACCTGGGGTACGACCTC-AATCATCATCAAGGGGGCCCCTCGTTATAAC 779 | ||||||||| ||| || |||||| | |||||||||||||||| || ||||||||||| Sbjct 766 CATCCTCCACAGTCTGAGGCACGACC-CAAATCATCATCAAGGGGACCTCTCGTTATAAC 824 Query 780 GGCAATAGTTGCGGCCCTGACAATACTCATAATCCTTGGAGTGATCATCTTGCTTAACCG 839 |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 825 AGCAATAGTCGCGGCCTTGACAATACTCATAATCCTTGGAGTGATCTTCTTGCTTAACCG 884 Query 840 CAACTATAGGAATAAACAACCGCGTTTGGTGGTGGAAAACGGACCATCAAGTCTACAGAA 899 || ||||| ||||||| |||||||||||| |||||||| ||||||||||||||||||||| Sbjct 885 CAGCTATAAGAATAAAAAACCGCGTTTGGCGGTGGAAACCGGACCATCAAGTCTACAGAA 944 Query 900 GAAAACCAGCATCCGAGAAGCGGACCAAAGCCGGAGAGAAC-GACAGAAAGCCGACCATC 958 ||||||| ||||||||||||| |||||||| || |||| || || ||||||||||||| | Sbjct 945 GAAAACCGGCATCCGAGAAGCAGACCAAAGTCGTAGAG-ACAGAAAGAAAGCCGACCACC 1003 Query 959 GGAATGGCTCAGGCACTACTAAAAGGATGGGTACAGCAGCTGGAGTGGAGAACACAAAGC 1018 |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 1004 GGAAAGGCTCAGGCACTACTAAGAGGATGGGTGCAGCAGCTGGAGTGGAGAACACAAAGC 1063 Query 1019 TTTCATTCTTGAGGGAAGATAGGGAAAAATTTGACCTGCAAGATCTGTTGAAGGCTTCAG 1078 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1064 TTTCATTCTTGAGGGAAGATAGGGAAAAATTTGACCTGCAAGATCTGTTGAAGGCTTCGG 1123 Query 1079 CTGAGATACTTGGAAGTGGATGTTTTGGAGCATCCTATAAAGCAGTGCTATCAAGCGGAC 1138 | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1124 CCGAGATACTTGGAAGTGGATGTTTTGGAGCATCTTATAAAGCAGTGCTATCAAGCGGAC 1183 Query 1139 AAATGATGGTCGTGAAGAGGTTCAAGCAGATGAATAATGCAGGGAGGGATGAGTTTCAAG 1198 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1184 AAATGATGGTCGTGAAGAGGTTCAAGCAGATGAACAATGCAGGGAGGGATGAGTTTCAAG 1243 Query 1199 AGCACATGAAAAGATTAGGGAGGTTAAGGCACCATAATCTGCTTCCCATTGTGGCTTATT 1258 ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct 1244 AGCACATGAAAAGATTAGGGAGGTTAATGCACCATAATCTGCTTTCCATTGTGGCTTATT 1303 Query 1259 ACTATAGGAAGGAGGAAAAGCTATTGGTATGTGATTTTGCTGAGAGAGGAAGCTTGGCTG 1318 |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 1304 ACTATAGGAAGGAGGAAAAGCTTTTAGTATGTGATTTTGCTGAGAGAGGAAGCTTGGCTA 1363 Query 1319 TTAATCTTCATAG---------G--A--AA--CCAAGTTTGGACTGGCCAACAAGATTGA 1363 ||||||||||||| | | || |||||||||||||||||||||||||||| Sbjct 1364 TTAATCTTCATAGTAATCAATCGTTAGGAAAACCAAGTTTGGACTGGCCAACAAGATTGA 1423 Query 1364 AGATCGTGAAAGGAGTTGCAAGGGGGCTGTTATATCTCCACCAAGATCTACCTAGACTAA 1423 |||||||||| |||||||||| |||| |||| |||||||||||||| |||||||| |||| Sbjct 1424 AGATCGTGAAGGGAGTTGCAAAGGGGTTGTTCTATCTCCACCAAGACCTACCTAGCCTAA 1483 Query 1424 TGGCTCCACATGGTCATCTCAAATCCTCCAACGTTCTCCTCACCAAAACCTTTGAACCAC 1483 |||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||| Sbjct 1484 TGGCTCCACATGGTCACCTCAAATCCTCCAACGTTCTTCTCACCAAAACATTTGAACCAC 1543 Query 1484 TTCTCACAGACTATGGCTTAATTCCGGTGCTCAACCAAGAGAAGGCACAAGTGCATATGG 1543 |||||||||||||||| ||||||||| || |||||||||||||||||||| |||| |||| Sbjct 1544 TTCTCACAGACTATGGATTAATTCCGTTGATCAACCAAGAGAAGGCACAAATGCACATGG 1603 Query 1544 CAGCCTATAGATCTCCAGAGTATTTGCAACACCGACGTATCACCAAGAAAACCGATGTTT 1603 | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 1604 CGGCCTATAGATCTCCAGAGTATTTGCAACATCGACGTATCACCAAGAAAACCGATGTAT 1663 Query 1604 GGGGGCTTGGCATACTCATCCTGGAGATCCTAACGGGAAAATTCCCACCTAATTTCTCAC 1663 |||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||| Sbjct 1664 GGGGGCTTGGCATACTTATCTTGGAGATCCTAACGGGAAAATTCCCGGCTAATTTCTCAC 1723 Query 1664 AAGGTAGTGAAGAGGATTTAGCGAGTTGGGTGAACTCGGGTTTCCATGGAGTAGGGGCAC 1723 || |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 1724 AAAGTAGTGAAGAGGATTTAGCGAGTTGGGTGAACTCGGGTTTCCATGGGGTATGGGCAC 1783 Query 1724 CAAATTTGCTTGATAAGGGGATGGGCAAGACAAGCCATTGTGAAGGACAGATTCTTAAAC 1783 ||| |||| |||||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct 1784 CAAGTTTGTTTGATAAGGGTATGGGGAAGACAAGCCATTGTGAAGGACAGATTCTCAAAC 1843 Query 1784 TCTTGAGGATCGGATTGAGCTGTTGTGAACCCGATGTGGAGAAAAGGTTGGACATAGGAC 1843 |||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct 1844 TCTTGACGATCGGATTGAACTGTTGTGAACCCGACGTGGAGAAAAGGTTGGACATAGGAC 1903 Query 1844 AGGCTGTGGAGAAGATTGAAGTGTTGAAGGAGCGGGAAGGGGATGATGACGACTTCTACT 1903 |||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||| Sbjct 1904 AGGCTGTGGAGAAGATCGAAGAGTTGAAGGAGCGAGAAGGGGATGATGACGACTTCTACT 1963 Query 1904 CAACGTATGTGAGTGAAACTGATGGGAGGTCATCTAAAGGAGTGTCAAGCGAGAGTATCA 1963 ||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||||||| Sbjct 1964 CAACGTATGTGAGTGAAACTGATGGTAGGTCGTCTAAAGGAGAGTCATGCGAGAGTATCA 2023 Query 1964 GCTTTGCATGA 1974 ||||||||||| Sbjct 2024 GCTTTGCATGA 2034 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 97790661660 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5