BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg330263
Length=2586
Score E
Sequences producing significant alignments: (Bits) Value
AT5G37060.1 | Symbols: ATCHX24, CHX24 | cation/H+ exchanger 24 ... 3541 0.0
AT5G58460.1 | Symbols: ATCHX25, CHX25 | cation/H+ exchanger 25 ... 2388 0.0
> AT5G37060.1 | Symbols: ATCHX24, CHX24 | cation/H+ exchanger 24
| chr5:14642741-14645414 REVERSE LENGTH=2580
Length=2580
Score = 3541 bits (1917), Expect = 0.0
Identities = 2379/2601 (91%), Gaps = 36/2601 (1%)
Strand=Plus/Plus
Query 1 ATGGTTAGGCATTTCCCCATCAATGACGACCAGAGTGTCCTGCCTACCCATTTTGGGTTT 60
||||||||||| |||||||||||| ||||||||| |||||||| |||||||||||||
Sbjct 1 ATGGTTAGGCACTTCCCCATCAAT---GACCAGAGTCTCCTGCCTGCCCATTTTGGGTTC 57
Query 61 TGGCCGGGTAATTCAACCAC-CCCGGGAGAGGTCA-CTAGTCGTGTCTTCTCTCCCAAAC 118
||||||||||| |||||||| ||| |||||||||| | | |||||| ||||||||||||
Sbjct 58 TGGCCGGGTAACTCAACCACACCC-GGAGAGGTCAGC-AATCGTGTTTTCTCTCCCAAAA 115
Query 119 TTCCGGTGGTATGCCGGCAACTTCATAGTAAGCAACCGTTTGGAATGTTCAAAGGCGAAA 178
|||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 116 TTCCGGTGGTTTGCCGGAAACTTCATAGTAAGCAGCCGTTTGGAATGTTCAAAGGCGAAA 175
Query 179 ATGCGATGAACTATGCATTTTCGACTTTTTTAATCGAAGCAATCATCATCATTTTCTGCA 238
|||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||| ||
Sbjct 176 ATGCTATGAACTACGCATTTTCGACCTTTTTGATCGAAGCAATCATCATCATTTTCTTCA 235
Query 239 TCAAA-TTCGTTAG-TTTCGTCCTTCGACCTCTTCGCCAACCTCGTATAGTCAGCGAGAT 296
||||| || ||||| || | |||||||||| |||||||||||||||||||||| |||||
Sbjct 236 TCAAAGTT-GTTAGCATT-GCCCTTCGACCTTTTCGCCAACCTCGTATAGTCAGTGAGAT 293
Query 297 CATTGGTGGAATGATGATAGGACCATCAATGCTTGGAGGAAGCCGAAATTTCAATTACTA 356
||||||||||||||||||||||||||| ||| ||||||||| | ||||||||||||||||
Sbjct 294 CATTGGTGGAATGATGATAGGACCATCGATGTTTGGAGGAATCAGAAATTTCAATTACTA 353
Query 357 TCTGTTCCCACCGATCGCGAACTACATATGCGCAAACATAGGACTAATGGGATTCTTCTA 416
| | |||||||| || ||||| ||||||||||||||||||||||| ||||| || || ||
Sbjct 354 TTTATTCCCACCAATTGCGAATTACATATGCGCAAACATAGGACTGATGGGGTTTTTTTA 413
Query 417 CTTCCTCTTCCTCACGGCCGCGAAGACGGATGTTGCATCCATTGGG-AGAGCACCAAGAA 475
|||||||||||||||||| || |||||||| |||| | |||||||| || ||||||||||
Sbjct 414 CTTCCTCTTCCTCACGGCGGCCAAGACGGACGTTGGAGCCATTGGGAAG-GCACCAAGAA 472
Query 476 AGCACAAGTACATTGCTGCCATTGGTGTTATCGTGCCAATTATCTGCG-TGGGAGCCGTG 534
|||||||||||||||||||||| || ||||||||||| || ||||||| ||| || ||||
Sbjct 473 AGCACAAGTACATTGCTGCCATAGGAGTTATCGTGCCGATAATCTGCGTTGGAAG-CGTG 531
Query 535 GGGATGGCCATGCGAGATAAAATGGATGAAAACTTGAAGAAGCCTTCGTCCATTGGGGGG 594
||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || ||
Sbjct 532 GGGATGGCCATGCGAGACCAAATGGATGAAAACTTGCAGAAGCCTTCGTCCATT-GGAGG 590
Query 595 A-TCATGTTCGCCTTGGCTTTCACCTCTTTCCCTGTCATTTATTCTGTTTTGAGAGACAT 653
| || ||||||||||| ||||||| |||||||| |||||||| | ||||||||||||||
Sbjct 591 AGTCGTGTTCGCCTTGTCTTTCACTTCTTTCCCGGTCATTTACACCGTTTTGAGAGACAT 650
Query 654 GAACCTTCTTAACTCCGAGGTGGGCAAGTTCGCCATGTCGGTGGCTCTCCTTGGAGACAT 713
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 651 GAACCTTCTCAACTCCGAGGTGGGCAAGTTCGCCATGTCGGTGGCTCTCCTTGGAGACAT 710
Query 714 GGCAGGGGTCTACGTGATTGTTATTTTTGAAGCCATGACGCAGGCTGACGGAGGAGGAGC 773
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 711 GGCAGGGGTCTACGTGATTGTTATTTTTGAAGCCATGACGCATGCTGACGTAGGAGGAGC 770
Query 774 ATATGCTCTCTTTTGGTTTCTAGTATCGGTGGTAATCTTCGCGGCTTTTATGCTTTTGGT 833
||| || |||| |||||||||||||||||||| |||||||| |||||||||||| ||||
Sbjct 771 TTATTCTGTCTTCTGGTTTCTAGTATCGGTGGTCATCTTCGCAGCTTTTATGCTTCTGGT 830
Query 834 TGTTAGACGAGCCTTTGATTGGATTGT-TGCCCAAACGCCTGAAGGAACACTTGTGAACC 892
|||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||
Sbjct 831 TGTTAGACGAGCCTTTGATTGGATAGTCT-CCCAAACGCCTGAAGGAACACTTGTGAACC 889
Query 893 AAAACTACATTGTCATGATTCTCATGGGTGTCCTTGCCTCTTGTTTCCTCACCGACATGT 952
|||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 890 AAAACTACATCGTCATGATTCTCATGGGTGTTCTTGCCTCTTGTTTCCTCACAGACATGT 949
Query 953 TCGGTCTTTCTATAGCCGTAGGACCCATTTGGTTAGGGTTGCTGGTCCCTCATGGCCCAC 1012
||||||||||||||||||| |||||||||||| ||||||| || ||||||||||||||||
Sbjct 950 TCGGTCTTTCTATAGCCGTGGGACCCATTTGGCTAGGGTTACTAGTCCCTCATGGCCCAC 1009
Query 1013 CGTTGGGTTCGACGTTGGCTGTTCGGAGCGAGACCTTCATCTATGAATTTTTGATGCCTT 1072
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1010 CGTTGGGTTCGACGTTGGCTGTCCGAAGCGAGACCTTCATCTATGAATTTTTGATGCCTT 1069
Query 1073 TCTCTTATGCTTTGGTGGGACAAGGCACCAATATTCACTACTTTAGAGATGAGACATGGC 1132
|| | |||||| | |||||||||||||||||||| |||| | ||||||||||||||||||
Sbjct 1070 TCACATATGCTCTAGTGGGACAAGGCACCAATATCCACTTCCTTAGAGATGAGACATGGC 1129
Query 1133 GTGATCAGCTCTCTCCTCTCTTCTACATGACCCTCGTCGGCTTCTTCACTAAGTTTCTCT 1192
| ||||||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||
Sbjct 1130 GCAATCAGCTATCTCCTCTCTTCTACATGACCGTCGTCGGCTTCATCACCAAGTTTCTCT 1189
Query 1193 CTACCGCTGCCACTGCTCTCTTCTTCAAAGTCCCCGCTAGGGACAGTCTCACGCTTGGGT 1252
|||||||| | ||||||| ||||||||||||||||||||||| ||| | || ||||| |
Sbjct 1190 CTACCGCTTTCGCTGCTCTATTCTTCAAAGTCCCCGCTAGGGAAAGTATTACACTTGGTT 1249
Query 1253 TGATGATGAACTTGAGAGGCCAGATGGATATCTTGGTCTACTTGCATTGGATCGATAAAC 1312
||||||||||||| ||||| ||||||||| | ||||| ||||||||||||||||||||||
Sbjct 1250 TGATGATGAACTTAAGAGGTCAGATGGATTTGTTGGTATACTTGCATTGGATCGATAAAC 1309
Query 1313 GTATTGTGGGCTTTCCAGGTTTCACTGTCATGGTTTTGCATTCGGTTGTAGTCACGGCCG 1372
|||||||||||||||| |||| ||||||||||||||||||| ||||||| ||||| || |
Sbjct 1310 GTATTGTGGGCTTTCCCGGTTACACTGTCATGGTTTTGCATACGGTTGTGGTCACAGCTG 1369
Query 1373 TATCGACGCCGCTCATCAGCTTTCTCTACGATCCCACTCGGCCATACCGAAGCAGCAAAC 1432
|| |||| || ||||||| |||| |||||||||||||||| || |||||||||||||| |
Sbjct 1370 TAACGACCCCACTCATCAACTTTTTCTACGATCCCACTCGACCTTACCGAAGCAGCAAGC 1429
Query 1433 ACCGCACCATCCAACACACTCCTCAAAACACCGAGATGGGACTGGTTCTTGCAGTCTCCA 1492
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 1430 ACCGCACCATCCAACACACTCCTCAGAACACCGAGATGGGACTGGTTCTTGCAGTTTCCG 1489
Query 1493 ACCACGAAACCTTATCCGGCTTGATAACTTTCCTCGACTTCGCCTATCCCACTAAAAGTA 1552
||||||||||||| || || ||||||||||| ||||| ||||||||||||||||||||||
Sbjct 1490 ACCACGAAACCTTGTCGGGTTTGATAACTTTTCTCGATTTCGCCTATCCCACTAAAAGTA 1549
Query 1553 GTCCCTTGTCTATATTCGCAGTCCAGCTTGTGGAACTAGCAGGGAGAGCCACGCCGTTGT 1612
||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 1550 GTCCCTTATCTATATTCGCAGTCCAGCTAGTGGAACTAGCAGGAAGAGCCACGCCGTTGT 1609
Query 1613 TTATTGACCATGAGCAGCGAAGGGAGGAGGATGAAGAAGAATACGAGGAGGAAGAAGAAG 1672
|||||||||| || || |||| ||||||||| ||||||||||||||||||||||| ||||
Sbjct 1610 TTATTGACCACGAACAACGAAAGGAGGAGGAAGAAGAAGAATACGAGGAGGAAGAGGAAG 1669
Query 1673 ACCCTGACCGTACAACGCAAAGTGGGCGAATAGACCAAGTCCAGAGCGCCTTTAAGTTGT 1732
| ||||| |||| | ||||||||| || ||||| || || || ||||||||||||||||
Sbjct 1670 AGCCTGAACGTA-A--GCAAAGTGGACGGATAGATCAGGTGCAAAGCGCCTTTAAGTTGT 1726
Query 1733 ACCAAGAGAAAAGAGATGAGTGTGT-ATCGCTT-CGTGCCTACACCGCTCATGCTCCAAA 1790
|| ||||||||||| ||||||| || | || || ||| | ||||| ||||||||||||||
Sbjct 1727 ACGAAGAGAAAAGAAATGAGTGCGTGA-CG-TTGCGTTCATACACAGCTCATGCTCCAAA 1784
Query 1791 ACGTCTCATGTACCAAGACATTTGCGAGCTGGCCTT-GGCTAA-AAAAGCCGCTTTCATT 1848
|||||||||||||||||||||||||||||| ||||| ||| || |||| |||||||||||
Sbjct 1785 ACGTCTCATGTACCAAGACATTTGCGAGCTTGCCTTAGGC-AAGAAAA-CCGCTTTCATT 1842
Query 1849 CTCTTACCTTATCAGAAAGAGCGTCTTGAAGACGCTGCCCCTACCGAGCTACGTGACTCC 1908
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1843 CTCTTACCTTATCAGAAAGAGCGTCTTGAAGACGCTGCCCCTACCGAGCTACGTGATTCC 1902
Query 1909 GGCATGCTATCTGTGAACGCAGACGTATTGGAACACACACCTTGCTCTGTATGTATCTAC 1968
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct 1903 GGCATGCTATCTGTGAACGCAGACGTCTTGGAACACACACCTTGCTCTGTCTGTATATAT 1962
Query 1969 TTTGACAAAGGACGGCTTAAGAACGCGGTGGTTCGGTTATCCATGGACCTACAACACTCA 2028
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1963 TTTGACAAGGGACGGCTTAAGAACGCGGTGGTTAGGTTATCCATGGACCTACAACACTCA 2022
Query 2029 ACAAACTCAAGCCGTATGAAACAAGAAACATACCGTTTCGTGGTTTTGTTTCTAGGAGGA 2088
|||||||||| |||||||| |||||||| ||||||||||||||||||||| ||||||||
Sbjct 2023 ACAAACTCAATCCGTATGAGGCAAGAAACGTACCGTTTCGTGGTTTTGTTTTTAGGAGGA 2082
Query 2089 GCTGATAACAGAGAAGCTCTACATTTAGCCGATAGAATGTCGACAAACCCGGACGTAACC 2148
|||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 2083 GCTGATAACAGAGAAGCTCTACATCTAGCCGATAGAATGTCAACAAACCCGGACGTAACG 2142
Query 2149 TTGACGGTGATCCGATTCTTGGCGTTCAACCACGAAGGAGAGGATGAGAGAGAGAAGAAG 2208
||||| |||||||||||||| ||| ||||||||||||||| || |||||||||||||||
Sbjct 2143 TTGACTGTGATCCGATTCTTATCGTACAACCACGAAGGAGAAGACGAGAGAGAGAAGAAG 2202
Query 2209 CTAGACGATGGGGTAGTCACGTGGTTTTGGGTCAAGAACGAAGGAAACGATAGGGTTAGT 2268
||||||||||| |||||||| |||||||||||||| |||||| | ||||| |||||||||
Sbjct 2203 CTAGACGATGGTGTAGTCACATGGTTTTGGGTCAAAAACGAAAGCAACGAGAGGGTTAGT 2262
Query 2269 TACAAAGAGGTTGTAGTTAAAAACGGTGCTGAGACATTGGCTGCGATCCAAGCAATGAAT 2328
|||||||| |||||||| || ||||||||||||||| | ||||| |||||||||||||||
Sbjct 2263 TACAAAGAAGTTGTAGTCAAGAACGGTGCTGAGACACTCGCTGCAATCCAAGCAATGAAT 2322
Query 2329 GTCAACGACTACGATCTATGGATAACCGGAAGAAGAGAAGGGATCAACCCAAAGATTCTT 2388
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2323 GTCAACGACTACGATCTCTGGATAACCGGAAGAAGAGAAGGGATCAACCCAAAGATTCTT 2382
Query 2389 GAAGGTTTATCCACGTGGAGCGAAGACCACCAGCTTGGAGTCATCGGAGACACCGTGGCT 2448
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 2383 GAAGGTTTATCCACGTGGAGCGAAGACCACCAGCTCGGAGTCATTGGAGACACCGTGGCT 2442
Query 2449 G-GAAGCGT-TTTCGCCTCCGA-GGGATCGGTGTTGGTGGTGCAGCAACAAGTAAGGAAC 2505
| || |||| ||| ||||| || ||| |||||||||||||||||||||||||| ||||||
Sbjct 2443 GCGA-GCGTCTTT-GCCTCAGAAGGG-TCGGTGTTGGTGGTGCAGCAACAAGTGAGGAAC 2499
Query 2506 CAAAAAGGTGGTGATGGTTTCTTGAATGGCAAGTTTGATTACAAGAGTTTCTTATCTCCT 2565
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2500 CAAAAAGGTGGTGATGGTTTCTTGAATGGCAAGTTTGATTACAAGAGGTTCTTATCTCCT 2559
Query 2566 TGGTCTCACTCTCATAATTGA 2586
|||||||||||||||||||||
Sbjct 2560 TGGTCTCACTCTCATAATTGA 2580
> AT5G58460.1 | Symbols: ATCHX25, CHX25 | cation/H+ exchanger 25
| chr5:23632361-23635037 REVERSE LENGTH=2574
Length=2574
Score = 2388 bits (1293), Expect = 0.0
Identities = 2202/2631 (84%), Gaps = 102/2631 (4%)
Strand=Plus/Plus
Query 1 ATGGTTAGG-CATTTCCCCATCAATGACGACCAGAGTGTCCTGCCTACCCATTTTGGGTT 59
||||||||| | ||| |||| | ||| | | ||||| ||||||||||| |||||||||
Sbjct 1 ATGGTTAGGTC-TTT-CCCA--AGTGATGGCTGGAGTGCCCTGCCTACCCGTTTTGGGTT 56
Query 60 TTGGCC-GGGTAATTCAACCACC-CCGGGAGAGGTCA-CTAGTCGTGTCTTCTCTCCCAA 116
||||| | | ||| |||||||| || |||| ||||| | |||||||| ||||| |||
Sbjct 57 CTGGCCAGAG-AATCCAACCACCGCC-GGAGTGGTCAGC-AGTCGTGTTTTCTCAGCCAG 113
Query 117 ACTTCCGGTGGTATGCCGGCAACTTCATAG-TAAGCAACCGTTTGGAATGTTCAAAGGCG 175
|||||||| ||| ||||| || |||| | |||||| ||||| ||||||||||||||||
Sbjct 114 ACTTCCGGAGGTTTGCCGACAGGTTCA-CGATAAGCAGCCGTTCGGAATGTTCAAAGGCG 172
Query 176 AAAAT-GCGATGAACTATGCATTTTCGACTTTTTTAATCGAAGCAATCA-TCATCATTTT 233
||||| || |||||||| ||||||| || ||||| ||||||||||| | ||||||||||
Sbjct 173 AAAATGGC-ATGAACTACACATTTTCAACCTTTTTGATCGAAGCAAT-ACTCATCATTTT 230
Query 234 CTGCATC-AAATTCG-TTAGTTTCGTCCTTCGACCTCTTCGCCAACCTCGTATAGTCAGC 291
|| |||| ||||| | ||| || |||||||||||||||||||||||||||||||| ||
Sbjct 231 CTTCATCAAAATT-GTTTA-CGTCCTCCTTCGACCTCTTCGCCAACCTCGTATAGTCTGC 288
Query 292 GAGATCATTGGTGGAATGATGATAGGACCATCAATGCTT-GGAGGAAGCCGAAATTTCAA 350
|||||||||||||| |||||||||||||| || ||| || ||| ||| |||||| |||||
Sbjct 289 GAGATCATTGGTGGGATGATGATAGGACCGTCCATG-TTAGGAAGAAACCGAAACTTCAA 347
Query 351 TTACTATCTGTTCCCACCGATCGCGAACTACATATGCGCAAACATAGGACTAATGGGATT 410
|||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct 348 TTACTATCTGTTTCCACCGATTGCGAATTACATATGCGCAAACATAGGACTGATGGGATT 407
Query 411 CTTCTACTTCCTCTTCCTCACGGCCGCGAAGACGGATGTTGCATCCAT-TGGGAGAGCAC 469
||| |||||| ||||||||||||| || || || || |||||| || | | |||||
Sbjct 408 CTTTTACTTCTTCTTCCTCACGGCTGCCAAAACAGACGTTGCAGAAATCT-TTAAAGCAC 466
Query 470 CAAGAAAGCACAAGTACATTGCTGCCA-TTGGTGTTATCGTGCCAATTATC-TGCGT-GG 526
|||||||||| ||||||||||||| || || | ||| | ||||| ||| | ||||| ||
Sbjct 467 CAAGAAAGCATAAGTACATTGCTG-CAGTTAGCGTTTTGGTGCCGATT-GCTTGCGTGGG 524
Query 527 GAGC-CGTGGGGATGGCCATGCGAGATAAAATGGATGA-AA-ACTTGAAGAAGCCTTCGT 583
|||| || || | | ||| | | | ||||||||| | || | ||| |||| |||||||
Sbjct 525 GAGCACG-GGAGCT-GCCCTAAAACACAAAATGGAT-ATAAGA-TTGCAGAAACCTTCGT 580
Query 584 CCATTGG-GGGGATCATGTTCGCCTTGGCTTTCACCTCTTTCCCTGTCATTTATTCTGTT 642
||||||| |||| ||| ||||||||||| |||||| ||||| || |||||||| |||||
Sbjct 581 CCATTGGAGGGG-TCACGTTCGCCTTGGGTTTCACTTCTTTTCCGGTCATTTACACTGTT 639
Query 643 TTGAGAGACATGAACCTTCTTAACTCCGAGGTGGGCAAGTTCGCCATGTCGGTGGCTCTC 702
|||||||||||||||||||| ||||| ||| | || |||||||||||||| ||| |||||
Sbjct 640 TTGAGAGACATGAACCTTCTCAACTCTGAGATAGGAAAGTTCGCCATGTCAGTGACTCTC 699
Query 703 CTTGGAGACATGGCAGGGGTCTACGTGATTGTTATT-TTTGAAGCCATGACGCAGGCTGA 761
||||||||||||| |||||||||||| ||||| || |||||||||||| ||||||||||
Sbjct 700 CTTGGAGACATGGTTGGGGTCTACGTGCTTGTT-TTGTTTGAAGCCATGGCGCAGGCTGA 758
Query 762 CGGAGGAGGAGCAT-ATGCTCTCTT-T-TGGTTTCT-AGTATCGGTGG-TAATCTTCGCG 816
||||||||||| | || |||| | | |||||||| | |||||| || || || | ||
Sbjct 759 CGGAGGAGGAGGAGCATACTCTGTCATATGGTTTCTCA-TATCGGCGGCTA-TCATGGCC 816
Query 817 GCTT-TTATGCTTTTGGTTGTTAGACGAGCCTTTGATTGGATTGTTGCCCAAACGCCTGA 875
|||| || ||||||||||||| | |||| ||||||| |||||||| ||| ||||||||||
Sbjct 817 GCTTGTT-TGCTTTTGGTTGTGAAACGATCCTTTGAATGGATTGTCGCCAAAACGCCTGA 875
Query 876 AGGAACACTTGTGAACCAAAACTACATTGTCA-TGATTCTCATGGGTGTCCTTGCCTCTT 934
||| ||| ||||||||||||||||| |||| | ||||||||||||||||||| |||||
Sbjct 876 GGGAGGACTCGTGAACCAAAACTACATCGTCAAT-ATTCTCATGGGTGTCCTTGTCTCTT 934
Query 935 GTTTCCTCACCGACATGTTCGGTCTTTCTATAGCCGTAGGACCCATTTGGTTAGGGTTGC 994
|||||||||| |||||||||||| | ||||||| || |||||||||||| | ||||||
Sbjct 935 GTTTCCTCACTGACATGTTCGGTATGGCTATAGCTGTTGGACCCATTTGGCTGGGGTTGG 994
Query 995 TGGTCCCTCATGGCCCACCGTTGGGTTCGACGTTGGCTGTTCGGAGCGAGACCTTCATCT 1054
||||||||||||| |||||||| ||||||||||||||| || ||||||||||||| | |
Sbjct 995 TGGTCCCTCATGGACCACCGTTAGGTTCGACGTTGGCTATTAGGAGCGAGACCTTTGT-T 1053
Query 1055 A-TGAATTTTTGATGCCTTTCTCTTATGCTTTGGTGGGACAAGGCACCAATATTCA-CT- 1111
| |||||| |||||||||||||||| |||||||||||||||| |||||| | || ||
Sbjct 1054 AATGAATTCTTGATGCCTTTCTCTTTTGCTTTGGTGGGACAAAAAACCAATGT-CAACTT 1112
Query 1112 ACTTTAG-AGATGAGACATGGCGTGATCAGCTCTCTCCTCTCT-TCTACATGACCCTCGT 1169
| || || | | ||||| |||| | ||| |||||||||| | ||||||||| | ||||
Sbjct 1113 AATT-AGCAAA-GAGACGTGGCCCAAACAGATCTCTCCTCT-TATCTACATGAGCATCGT 1169
Query 1170 CGGCTTCTTCACTAAGTTTCTCTCTACCGCTGCCACTGCTCTCTTCTTCAAAGTCCCCGC 1229
|||||| |||| |||||| ||||| || ||| | ||||||||||||| ||||||||| |
Sbjct 1170 TGGCTTCGTCACCAAGTTTGTCTCTTCCACTGGCGCTGCTCTCTTCTTTAAAGTCCCCAC 1229
Query 1230 TAGGGACAGTCTCACGCTTGGGTTGATGATGAACTTGAGAGGCCAGATGGATATCTTGGT 1289
||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |
Sbjct 1230 TAGGGACAGTCTCACGCTTGGCCTGATGATGAACTTGAGAGGCCAGATCGATATCTTACT 1289
Query 1290 CTACTTGCATTGGATCGATAAACGTATTGTGGGCTTTCCAGGTT-TCACTGTCATGGTTT 1348
|||||||||||||||||| |||| || || ||||| || |||| | ||||||||||||
Sbjct 1290 CTACTTGCATTGGATCGACAAACAAATGGTAGGCTTACCCGGTTATT-CTGTCATGGTTT 1348
Query 1349 TGCATTCGGTTGTAGTCACGGCCGTATC-GACGCCGCTCATCAGCTTTCTCTACGATCCC 1407
|| || || | || ||||||| ||| | | ||||||| |||||||| ||||||||||||
Sbjct 1349 TGTATGCGATCGTGGTCACGGGTGTAACAG-CGCCGCTAATCAGCTTCCTCTACGATCCC 1407
Query 1408 ACTCGGCCATACCGAAGCAGCAAACACCGCACCATCCAACACACTCCTCAAAACACCGAG 1467
|||||||| || |||||||||| | |||||| ||||||||||||||||| |||||||||
Sbjct 1408 ACTCGGCCTTATAGAAGCAGCAAGCGCCGCACAATCCAACACACTCCTCAGAACACCGAG 1467
Query 1468 ATGGGACTGGTTCTTGCAGTCTCCAACCACGAAACCTTATCCGGCTTGATAAC-TTTCCT 1526
| |||||| ||||||||||| || |||| || ||||| || |||||||| || |||| |
Sbjct 1468 ACGGGACTAGTTCTTGCAGTAACCGACCATGATACCTTCTCAGGCTTGATCACGTTTC-T 1526
Query 1527 CGACTTCGCCTATCCCACTAAAAGTAGTCCCTTGTCTATATTCGCAGTCCAGCTTGTGGA 1586
|||||||| ||||||||||||| |||||| || ||| |||||||| | ||||| |||||
Sbjct 1527 AGACTTCGCTTATCCCACTAAAACTAGTCCTTTCTCTGTATTCGCAATTCAGCTAGTGGA 1586
Query 1587 ACTAGCAGGGAGAGCC-A-CGCCGTTGTTTATTG-ACCATGAGCAGCGAAGGGAGGAGGA 1643
||| | |||| | ||| | | || |||||||||| || | || || ||| ||| | |
Sbjct 1587 ACTGGAAGGGCGTGCCCAAC-CC-TTGTTTATTGCAC-ACGA-CAA-GAAA--AGG-G-A 1637
Query 1644 TGAAGAAGAATACGAGGAGGAAGAAGAAGACC--CTGACCGTACAACGCAAAGTGGGCGA 1701
| |||||||||||||| || ||||| | || | || |||| | | | |||||
Sbjct 1638 -G--GAAGAATACGAGGAAGAGGAAGA-G-CCTGCAGAGCGTATGGGG-A--GCAGGCGA 1689
Query 1702 ATAGACCAAGTCCAGAGCGCCTTTAAGTTGTACCAAGAGAAAAGA-GATGAGTGTGT-AT 1759
|||||||||| |||||||| ||||| ||||||||||||||||| | ||||||||| |
Sbjct 1690 GTAGACCAAGTGCAGAGCGCATTTAAACTGTACCAAGAGAAAAGAAG-TGAGTGTGTGA- 1747
Query 1760 CGCTTCGTGCCTACACCGCTCATGCTCCAAAACGTCTCATGTACCAAGACATTTGCGAGC 1819
|| | | ||||||||| || |||||| |||| | | |||||| ||| | ||||||||||
Sbjct 1748 CGATGCATGCCTACACTGCACATGCTTCAAAGCATAACATGTATCAAAATATTTGCGAGC 1807
Query 1820 TGGCCTTGGCTAA-AAAAGCCGCTTTCATTCTCTTACCTTATCAGAAAGAGCGTCTTGAA 1878
|||| ||| | || |||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1808 TGGCTTTGACCAAGAAAA-CCGCTTTCATTCTCTTACCTTATCAGAAAGAGCGTCTTCAA 1866
Query 1879 GACGCTGCCCCTACCGAGCTACGTGACTCCGGCATGCTATCTGTGAACGCAGACGTATTG 1938
||||| || | ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1867 GACGCAGCTCTTACCGAGCTACGTGACTCCGGCATGCTATCTGTGAACGCAGACGTCTTG 1926
Query 1939 GAACACACACCTTGCTCTGTATGTATCTACTTT-GACAAAGGACGGCTTAAGAACGCGGT 1997
| ||||||||| || ||||| |||||||| || || || ||||| ||||||||||| |
Sbjct 1927 GCACACACACCATGTTCTGTCTGTATCTA-TTACGAGAAGGGACGACTTAAGAACGCTAT 1985
Query 1998 GGTTCGGTTATCCATGGACCTACAACACTCAACAAACTCAAGCCGTATGAAACAAGAAAC 2057
|||| ||| ||||||||||| ||||||| ||||||| || |||| ||||| |||||||
Sbjct 1986 GGTTAGGTCATCCATGGACCCACAACACACAACAAATTCTAGCCATATGAGGCAAGAAAT 2045
Query 2058 ATACCGTTTCGTGGTTTTGTTTCTAGGAGGAGCTGATAACAGAGAAGCTCTACATTTAGC 2117
||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| | ||
Sbjct 2046 GTACCGTTTCGTGGTTCTGTTTTTAGGAGGAGCTGATAACAGAGAAGCTCTGCATCTGGC 2105
Query 2118 CGATAGAATGTCG-ACAAACCCGGACGTAACCTTGACGGTGATCCGATTCTTGGCGTTCA 2176
||||| ||| || | || || | | ||| |||||| ||||| | ||||||||| ||
Sbjct 2106 TGATAGGATGACGGAGAATCC-GTTCATAAACTTGACAGTGATTAGGTTCTTGGCGCACA 2164
Query 2177 ACCACGAAGGAGAGGATGAGAGAGAGAAGAAGCTAGACGATGGGGTAGTCACGTGGTTTT 2236
|||||||||||||||| ||||| ||||||||||| ||||||||||| || |||||||| |
Sbjct 2165 ACCACGAAGGAGAGGACGAGAGGGAGAAGAAGCTGGACGATGGGGTGGTGACGTGGTTCT 2224
Query 2237 GGGTCAAGAACGAAGGAAACGATAGGGTTAGTTACAAAGAGGTTGTAGTTAAAAACGGTG 2296
|||||||||||||| | |||| ||||||||| ||||| |||||||| || || |||||||
Sbjct 2225 GGGTCAAGAACGAAAGCAACGCTAGGGTTAGCTACAAGGAGGTTGTTGTGAAGAACGGTG 2284
Query 2297 CTGAGACATTGGCTGCGATCCAAGCAATGAATGTCAACGACTACGATCTATGGATAACCG 2356
||||||| ||||||||||| ||||||||||||||||| ||||| ||| | ||||||||||
Sbjct 2285 CTGAGACGTTGGCTGCGATTCAAGCAATGAATGTCAATGACTATGATTTGTGGATAACCG 2344
Query 2357 GAAGAAGAGAAGGGATCAACCCAAAGATTCTTGAAGGT-TTATCCACGTGGAGCGAAGAC 2415
| || |||||||||||||| ||||||||||| ||||| || || |||||||||||||||
Sbjct 2345 GGAGGAGAGAAGGGATCAATCCAAAGATTCTGGAAGGACTT-TCTACGTGGAGCGAAGAC 2403
Query 2416 CACCAGCTTGGAGTCATCGGAGACACCGTGGCTGGAAGCGTTTTCGCCTCCGAGGGATCG 2475
||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||
Sbjct 2404 CACCAGCTTGGAGTCATTGGAGACACCGTGGCTGGGAGCGTTTTCGCCTCGGAGGGTTCG 2463
Query 2476 GTGTTGGTGGTGCAGCAACAAGTAAGGAACCAAAAAGGTGGTGATGGTTTCTTGAATGGC 2535
||||||||||||||||||||||| || ||||| | |||||||||||||||||||| |||
Sbjct 2464 GTGTTGGTGGTGCAGCAACAAGTGAGAAACCAGATGGGTGGTGATGGTTTCTTGAACGGC 2523
Query 2536 AAGTTTGATTACAAGAGTTTCTTATCTCCTTGGTCTCACTCTCATAATTGA 2586
|||||||||||||||| || | |||||||||||||||||||||||||||
Sbjct 2524 AAGTTTGATTACAAGAAATTAGTGTCTCCTTGGTCTCACTCTCATAATTGA 2574
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 128377207137
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5