BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg330267
Length=1503
Score E
Sequences producing significant alignments: (Bits) Value
AT5G37300.1 | Symbols: WSD1 | O-acyltransferase (WSD1-like) fam... 2224 0.0
> AT5G37300.1 | Symbols: WSD1 | O-acyltransferase (WSD1-like) family
protein | chr5:14767499-14770249 FORWARD LENGTH=1652
Length=1652
Score = 2224 bits (1204), Expect = 0.0
Identities = 1382/1468 (94%), Gaps = 11/1468 (1%)
Strand=Plus/Plus
Query 40 ATCCTTAAACCAACTATGAAAACGGAAAATGTTATGGAGAGAGAAGAGATCGAGACGATG 99
|||||||||| ||||||||| ||||||| ||||| | ||||| |||||||||||| | |
Sbjct 1 ATCCTTAAACTGACTATGAAAGCGGAAAAAGTTAT-G-GAGAG-AGAGATCGAGACAACG 57
Query 100 CCAATGGAGCCACTTAGCCCAATGTCACATATGCTAAGTTCGCCAAATTTCTTCATTGTG 159
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 58 CCAATAGAGCCTCTTAGCCCAATGTCACATATGCTAAGTTCGCCAAATTTCTTCATTGTC 117
Query 160 ATAACTTTTGGGTTTAAAGTTAGATGCAACCCATCGGCCTTTGTTGAAGGCATCAAGAAC 219
|||||||||||||||||| | ||||||||| ||||||||||||||| |||||||| |||
Sbjct 118 ATAACTTTTGGGTTTAAAACTCGATGCAACCGATCGGCCTTTGTTGATGGCATCAACAAC 177
Query 220 TCATTGATCAATGCTCCCAGATTCTCTAGCAAAATGGAGATAGATTATAAGAGAAAAGGA 279
||||||||||||||||||||||||| || |||||||||||| ||||||||| |||||||
Sbjct 178 ACATTGATCAATGCTCCCAGATTCTCCAGTAAAATGGAGATAAATTATAAGAAAAAAGGA 237
Query 280 GACCCGGTCTGGATTCCTGTTAAAGTTCGAGTAGAAGATCATGTTATTGTGCCAGATCCT 339
|| ||||||||||||||||||||| |||||||||| |||||| |||||||||| |||| |
Sbjct 238 GAACCGGTCTGGATTCCTGTTAAACTTCGAGTAGATGATCATATTATTGTGCCGGATCTT 297
Query 340 GAATATTCCAACATTGAAAATCCTGATCATTTCATAGAAGACTATACATCAAACATTGCT 399
||||||||||||||| ||||||||||||| ||| ||||||||||||| |||||||| |||
Sbjct 298 GAATATTCCAACATTCAAAATCCTGATCAGTTCGTAGAAGACTATACTTCAAACATAGCT 357
Query 400 AATATTCCAATGGACATGTCAAAACCTCTTTGGGAATTTCATTTACTCAACATAAAGACA 459
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 358 AATATTCCAATGGACATGTCCAAACCTCTTTGGGAATTTCATTTACTCAACATGAAGACA 417
Query 460 TCAAAAGCAGAATCTTTGGCTATAGTAAAAATACATCACTCAATTGGTGATGGAATGTCT 519
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 418 TCAAAAGCAGAATCTTTGGCTATAGTAAAAATACATCACTCCATTGGTGATGGGATGTCT 477
Query 520 CTTATGTCACTTTTACTTGCTTGTTCACGAAAAACATCAGACCCTGACGCGCTAATTTCT 579
|||||||| || ||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 478 CTTATGTCCCTACTACTTGCTTGTTCACGAAAAATATCAGACCCTGACGCGCTAGTTTCT 537
Query 580 ACTACCACGGCTACAAAGAAA-CCCGTTGATTCCATGGCTTGGTGGTTGTTTGTTGGATT 638
| ||||||||||||||| ||| || | |||||||||||||||||||||||||||||| ||
Sbjct 538 AATACCACGGCTACAAA-AAAGCCAGCTGATTCCATGGCTTGGTGGTTGTTTGTTGGGTT 596
Query 639 TTGGTTTATGATAAGAGTCACCTTCACCACTATTGTTGAATTTTCCAAGTTAATGCTTAC 698
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 597 TTGGTTTATGATAAGAGTCACCTTCACCACTATTGTTGAGTTTTCCAAGTTAATGCTTAC 656
Query 699 AATATGCTTTTTGCG-AGATACCAAAAACCCTCTTATGGGTAATCCGAGTGATGGATTTC 757
| ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 657 AGTATGCTTTTTG-GAAGATACCAAAAACCCTCTTATGGGTAACCCGAGTGATGGATTTC 715
Query 758 AATCTTGGAAGGTTGTCCATCGGATAATAAGTTTTGAGGATGTCAAGTTAGTGAAGGACA 817
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 716 AATCTTGGAAGGTTGTCCATCGGATAATAAGTTTTGAGGATGTCAAGTTAATAAAGGACA 775
Query 818 CAATGAACATGAAGGTGAATGATGTTCTTCTTGGAATGACAGAAGCAGGTCTTTCAAGAT 877
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 776 CAATGAACATGAAGGTGAATGATGTTCTTCTTGGAATGACACAAGCAGGTCTTTCAAGAT 835
Query 878 ATTTGAGTAGCAAATATGATGGATCAACAGCCGAGAAGAAAAAGATCTTAGAAAAACTCC 937
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 836 ATTTGAGTAGCAAATATGATGGATCAACGGCTGAGAAGAAAAAGATCTTAGAAAAACTCC 895
Query 938 GTGTTCGTGGTGCTGTAGCTATAAACTTAAGACCAGCAACAAAGATAGAGGATTTGGCTG 997
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 896 GTGTTCGTGGTGCCGTAGCTATAAACTTAAGACCAGCAACAAAGATAGAGGATTTGGCTG 955
Query 998 ATATGATGGCGAAGGGTTCAAAGTGTAGATGGGGAAACTTCATTGGAACAATTATATTTC 1057
||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 956 ATATGATGGCGAAGGGTTCAAAGTGTAGATGGGGAAACTTCATAGGAACGGTTATATTTC 1015
Query 1058 CTTTGTGGGTGAAACCAGAGAAGGATCCATTGGAGTACATTCGACGAGCCAAAGCTACGA 1117
| |||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1016 CGTTGTGGGTGAAATCAGAGAAAGATCCGTTGGAGTACATTCGACGAGCCAAAGCTACGA 1075
Query 1118 TGGATAGGAAGAAAATATCTTTGGAAGCTTTTATTTTCTATGGCATCATTAAATTCACCT 1177
|||||||||| ||||||||| ||||||||||| |||||||||| || |||||||||||||
Sbjct 1076 TGGATAGGAAAAAAATATCTCTGGAAGCTTTTTTTTTCTATGGAATTATTAAATTCACCT 1135
Query 1178 TGAAATTTTTTGGAGGAAAGGCAGTAGAAGCTTTTGGAAAGAGGATATTTGGTCACACAT 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136 TGAAATTTTTTGGAGGAAAGGCAGTAGAAGCTTTTGGAAAGAGGATATTTGGTCACACAT 1195
Query 1238 CATTGGCATTTTCAAATGTGAAAGGTCCCGATGAAGAAATAAGtttttttCATCATCCGA 1297
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1196 CATTGGCATTTTCAAATGTGAAAGGTCCCGATGAAGAAATAAGTTTTTTTCACCATCCGA 1255
Query 1298 TTTCATATATCGCAGGAAGTGCATTAGTTGGAGCACAAGCTCTCAATATCCATTTTATAA 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 TTTCATATATCGCAGGAAGTGCATTAGTTGGAGCACAAGCTCTCAATATCCATTTTATAA 1315
Query 1358 GCTACGTAGACAAGATTGTCATCAATCTAGCTGTTGATACAACAACGATTGCA-GATCCT 1416
||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||
Sbjct 1316 GCTACGTAGACAAGATTGTCATCAATCTAGCTGTTGACACAACAACGATT-CAAGATCCT 1374
Query 1417 CATCGACTATGCGATGATATGGTAGAAGCACTCGAGATAATCAAATCTGCCACACA-GGA 1475
|||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||| ||
Sbjct 1375 AATCGACTATGTGATGATATGGTGGAAGCACTTGAGATCATCAAATCTGCCACACAAGGG 1434
Query 1476 GAAAAGATTTCATAAAACGGAAGTTTGA 1503
|||| |||||| |||||||||||||||
Sbjct 1435 GAAAT-ATTTCACAAAACGGAAGTTTGA 1461
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74146204965
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5