BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg330382 Length=783 Score E Sequences producing significant alignments: (Bits) Value AT5G41390.1 | Symbols: | PLAC8 family protein | chr5:16565303-... 1269 0.0 AT1G63830.2 | Symbols: | PLAC8 family protein | chr1:23685319-... 634 0.0 > AT5G41390.1 | Symbols: | PLAC8 family protein | chr5:16565303-16567483 FORWARD LENGTH=1298 Length=1298 Score = 1269 bits (687), Expect = 0.0 Identities = 733/756 (97%), Gaps = 0/756 (0%) Strand=Plus/Plus Query 1 ATGGCGGGTTCGCAGGATAAGCTTGATAAGATGCAACTCCGGCAAAGTTACCGGAATTTA 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 274 ATGGCGCGTTCGCAGGATAAGCTTGATAAGATGCAACTCCGGCAAAGTTACCGGAATTTA 333 Query 61 TGGCACTCCGATCTCATGAGCACCGTCTCGGCCGATACTCCTTATTGTTTCTTCTCGTGT 120 |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||| Sbjct 334 TGGCACTCCGATCTCATGGGCACCGTCTCGGCGGATACTCCATATTGTTTCTTCTCGTGT 393 Query 121 TTGTGTGGACCTTGCGTTTCATACTTACTTCGGAAAAGAGCACTTTACAATGACATGTCA 180 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 394 TTGTGTGGACCTTGCGTTTCATACTTACTTCGGAAGAGAGCACTTTATAATGACATGTCA 453 Query 181 AGGTACACTTGTTGTGGTGGTTACATGCCTTGTAGTGGTAAGTGTGGAGAAAGCAAATGC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 454 AGGTACACTTGTTGTGGTGGTTACATGCCTTGTAGTGGTAAGTGTGGAGAAAGCAAATGC 513 Query 241 CCGCAATTTTGTCTTGCCACTGAGGTGTGTCTCTGTTTCGGGAATTCTGTGGCATCTACT 300 || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 514 CCTCAATTTTGTCTTGCCACCGAGGTGTGTCTCTGTTTCGGGAACTCTGTGGCATCTACT 573 Query 301 CGTTTTATGCTGCAAGATGAATTCAACATCCATACAACAAAATGCGACAATTGCATAATT 360 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 574 CGTTTTATGTTGCAAGATGAATTCAACATCCATACAACAAAATGCGACAATTGCATAATT 633 Query 361 GGATTTATGTTCTGCCTCAACCAAATCGCTTGCATTTTCTCTCTTGTCGCTTGCATTGTA 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 634 GGATTTATGTTCTGCCTCAACCAAATCGCTTGCATTTTCTCTCTTGTCGCTTGCATTGTT 693 Query 421 GGAAGTGATGAACTCTCTGAAGCTTCTCAGCTTCTTTCTTGTTTGGCGGATATGGTCTAT 480 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 694 GGAAGTGATGAACTCTCTGAAGCGTCTCAGCTTCTTTCTTGCTTGGCGGATATGGTCTAT 753 Query 481 TGCACGGTTTGTGCGTGTATGCAGACACAACACAAGATTGAGATGGACAAAAGAGATGGT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 754 TGCACGGTTTGTGCGTGTATGCAGACACAACACAAGATTGAGATGGACAAAAGAGATGGT 813 Query 541 GTGATTAGTCCTCAGCCAATGTCAGTGCCACCGGCTCAGCAAATGTCTCGCATTGATCAA 600 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 814 TTGATTAGTCCTCAACCAATGTCAGTGCCACCAGCTCAGCAAATGTCTCGCATTGATCAA 873 Query 601 CCAGTCCCTCCCTATGCCGGTTACCCTCCAGCTACTGGCTATCCCCAGCATTACTATCCA 660 || ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 874 CCGGTCCCTCCCTATGCCGGTTACCCTCCAGCCACTGGTTATCCCCAGCATTACTATCCA 933 Query 661 CAGCCTGGCCATGGTTACCCTCCTGCTCCAGGCTATCCACCTCCCGGTTACGGTTACCCT 720 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 934 CAGCCTGGCCATGGTTACCCTCCTGCTCCAGGCTATCCACCTCCCGGTCACGGTTACCCT 993 Query 721 CCTGCACCGGGATATCCGCCAGCTCCGGGATACCCA 756 ||||||||||| ||||||||||||||||| || ||| Sbjct 994 CCTGCACCGGGCTATCCGCCAGCTCCGGGCTATCCA 1029 > AT1G63830.2 | Symbols: | PLAC8 family protein | chr1:23685319-23687322 FORWARD LENGTH=1012 Length=1012 Score = 634 bits (343), Expect = 0.0 Identities = 542/637 (85%), Gaps = 18/637 (3%) Strand=Plus/Plus Query 1 ATGGCGG-GTTCGCAGGATAAGCTT-GATAAGATGCAACTCCGGCAAAG-TTACCGGAAT 57 ||||||| | ||||| |||||| || ||||||||| |||| ||| ||| |||||||||| Sbjct 90 ATGGCGGCG-TCGCAAGATAAG-TTGGATAAGATGAAACTTAGGC-AAGATTACCGGAAT 146 Query 58 TTATGGCACTCCGATCTCATGAGCACCGTCTCGGCCGATACTCCTTATTGTTTCTTCTCG 117 ||||||||||||||||||||| |||||||| | ||||| ||||| ||||| | | ||||| Sbjct 147 TTATGGCACTCCGATCTCATGGGCACCGTCACCGCCGACACTCCCTATTGCTGCATCTCG 206 Query 118 TGTTTGTGTGGACCTTGCGTTTCATACTTACTTCGGAAAAGAGCACTTTACAATGACATG 177 ||| ||||||||||||| || |||||| | ||||||| |||||||||||||||||||||| Sbjct 207 TGTCTGTGTGGACCTTGTGTGTCATACATGCTTCGGAGAAGAGCACTTTACAATGACATG 266 Query 178 TCAAGGTACACTTGTTGTGGTGGTTACATGCCTTGTAGTGGTAA-GTGTGGAGAAAGCAA 236 |||||||| ||||| |||| ||| || ||||| |||||||| || ||||||||||||||| Sbjct 267 TCAAGGTATACTTGCTGTGCTGGATATATGCCCTGTAGTGG-AAGGTGTGGAGAAAGCAA 325 Query 237 ATGCCCGCAATTTTGTCTTGCCACTGAGGTGTGT-CTCTGTTTCGGGAATTCTGTGGCAT 295 ||| || ||| |||| |||||||||||||| | | || || ||||| || |||||||| | Sbjct 326 ATGTCCTCAACTTTGCCTTGCCACTGAGGTCT-TCCTTTGCTTCGGAAACTCTGTGGCCT 384 Query 296 CTACTCGTTTTATGCTGCAAGATGAATTCAACATCCATACAACAAAATGCGACAATTGCA 355 |||| || ||| | ||||| ||||||||||||||||| |||||| ||||||||||||||| Sbjct 385 CTACCCGCTTTCTTCTGCAGGATGAATTCAACATCCAGACAACACAATGCGACAATTGCA 444 Query 356 TAATTGGATTTATGTTCTGCCTCAACCAAATCGCTTGCATTTTCTCTCTTGTCGCTTGCA 415 |||||||||||||||||||||||| |||| | |||||||| |||||| | || ||||||| Sbjct 445 TAATTGGATTTATGTTCTGCCTCAGCCAAGTTGCTTGCATATTCTCTATAGTTGCTTGCA 504 Query 416 TTGTAGGAAGTGATGAACTCTCTGAAGCTTCTCAGCTTCTTTCTTGTT-TGGCGGATATG 474 |||| || ||||||||||| || || ||||||||| | || ||||| | || | |||||| Sbjct 505 TTGTTGGTAGTGATGAACTTTCCGAGGCTTCTCAGATACTCTCTTGCTGTG-CTGATATG 563 Query 475 GTCTATTGCACGGTTTGTGCGTGTATGCAGACACAACACAAGA-TTGAGATGGACAAAAG 533 ||||| |||||||| || || |||||||||||||||||||| | |||||||||||||||| Sbjct 564 GTCTACTGCACGGTCTGCGCATGTATGCAGACACAACACAA-ACTTGAGATGGACAAAAG 622 Query 534 AGATGGTGTGATTAG-TCCTCAGCCAATGTCAGTGCCACCGGCTCAGCAAATGTCTCGCA 592 |||||| ||| || | || ||||||||| |||||||| |||||||| |||||||| Sbjct 623 AGATGGAGTGTTTGGATCG-CAGCCAATGGGTGTGCCACCAGCTCAGCAGATGTCTCGTT 681 Query 593 TTGATCAACCAGTCCCTCC-CTATGCCGGTTACCCTC 628 |||||||||| |||||||| | | | ||| ||||||| Sbjct 682 TTGATCAACCTGTCCCTCCTCCA-GTCGGATACCCTC 717 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 38077483426 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5