BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg330565
Length=837
Score E
Sequences producing significant alignments: (Bits) Value
AT5G39300.1 | Symbols: ATEXPA25, EXP25, ATEXP25, ATHEXP ALPHA 1... 1059 0.0
AT5G39280.1 | Symbols: ATEXPA23, ATEXP23, ATHEXP ALPHA 1.17, E... 1050 0.0
AT5G39270.1 | Symbols: ATEXPA22, EXP22, ATEXP22, ATHEXP ALPHA 1... 811 0.0
AT5G39290.1 | Symbols: ATEXP26, EXP26, ATHEXP ALPHA 1.16 | expa... 787 0.0
AT5G39260.1 | Symbols: ATEXPA21, EXP21, ATEXP21, ATHEXP ALPHA 1... 521 3e-147
AT5G39310.1 | Symbols: ATEXPA24, EXP24, ATEXP24, ATHEXP ALPHA 1... 468 4e-131
> AT5G39300.1 | Symbols: ATEXPA25, EXP25, ATEXP25, ATHEXP ALPHA
1.18, EXPA25 | expansin A25 | chr5:15737427-15738387 REVERSE
LENGTH=783
Length=783
Score = 1059 bits (573), Expect = 0.0
Identities = 719/790 (91%), Gaps = 8/790 (1%)
Strand=Plus/Plus
Query 49 ATGGCGACATGGTTCGTGTCCATGAGTTATGGTCATCGAGCGATGATGGTTAGTGATGTA 108
||||| |||| ||| |||||||||||||| |||||||||||||||| ||| |||||||
Sbjct 1 ATGGCTACATTGTTAGTGTCCATGAGTTACGGTCATCGAGCGATGA---TTAATGATGTA 57
Query 109 GCCGAAGCACCCGTGATTGACGATGTAGTAGGAAGCCCAACCAACGGACTCGACACTTCT 168
||||||||||||||||||||| | | ||||| |||||||||||||||||||||| ||||
Sbjct 58 GCCGAAGCACCCGTGATTGAC-A-AT-GTAGGCAGCCCAACCAACGGACTCGACAGTTCT 114
Query 169 TGGTATGACGCACGAGCAACATTTTACGGTGATATCCATGGTGGAGAAACTCAACAGGGA 228
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 115 TGGTATGATGCACGAGCAACATTTTACGGTGATATCCATGGTGGAGAAACTCAACAGGGA 174
Query 229 GCTTGTGGATACGGTGATTTATTCAGACAAGGCTATGGTCTAGCCACATCGGCATTGAGC 288
|| |||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct 175 GCCTGTGGATACGGTGATTTATTCAAACAAGGCTATGGTCTAGAGACAGCGGCATTGAGC 234
Query 289 ACAGCACTCTTCAATGAAGGGTACACATGTGGGGCTTGTTACGAGATCATGTGTGCGAAC 348
|||||||||||||| |||||||| |||||||||||||||||| |||||||||||| | ||
Sbjct 235 ACAGCACTCTTCAACGAAGGGTATACATGTGGGGCTTGTTACCAGATCATGTGTGTGCAC 294
Query 349 AATCCACAATGGTGTTTGCCCGGATCCATTAAGATCACTGCTACAAATTTCTGTCCACCA 408
| |||||||||||||| |||||| |||| ||||| || || ||||||||||||||||||
Sbjct 295 GACCCACAATGGTGTTTACCCGGAACCATCAAGATTACAGCAACAAATTTCTGTCCACCA 354
Query 409 AATTACACCAAAACCGTCGGCGTTTGGTGCAACCCACCCCAAAAGCATTTTGATCTCTCC 468
||||| ||||||||| |||||||||||||||||||| |||||||| ||||| ||||||
Sbjct 355 GATTACTCCAAAACCGAAGGCGTTTGGTGCAACCCACCACAAAAGCACTTTGACCTCTCC 414
Query 469 TTACCAATGTTCCTCAAGATCGCCCAGTACAAAGCTGGGGTTGTTCCAGTTAGATACAGA 528
||||||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||||
Sbjct 415 CTACCAATGTTCCTCAAGATCGCCCAATACAAAGCTGGAGTTGTCCCAGTTAAATACAGA 474
Query 529 CGTGTTGCTTGTGCAAAAACTGGTGGTGTCAAGTTTGAAACCAAAGGAAACCCTTATTTC 588
||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 475 CGTATTTCTTGTGCAAGAACTGGTGGTGTCAAGTTTGAAACCAAAGGAAACCCTTATTTC 534
Query 589 TTAATGATATTGCCATACAATGTAGGAGGAGCTGGAGATATTAAGTTCG-TGCAAGTTAA 647
|||||||| |||||||||||||||||||| ||||||||||| ||||| | ||||||||||
Sbjct 535 TTAATGATCTTGCCATACAATGTAGGAGGCGCTGGAGATATCAAGTT-GATGCAAGTTAA 593
Query 648 AGGAAACAAAACCGGGTGGATAACAATGAAAAAGAATTGGGGACAGAATTGGACCACTGG 707
|||| |||| |||||||||||||||||| ||||||| |||||||| || |||||||||||
Sbjct 594 AGGAGACAAGACCGGGTGGATAACAATGCAAAAGAACTGGGGACAAAACTGGACCACTGG 653
Query 708 TGTTAAGTTAACGGGTCAGGGTATATCGTTAAGGGTTACAACGAGTGATGGGATTACAAA 767
|||||| || || ||||||||||| || || |||||||| |||||||||||| |||||||
Sbjct 654 TGTTAATTTGACTGGTCAGGGTATTTCATTCAGGGTTACGACGAGTGATGGGGTTACAAA 713
Query 768 AGATTTTATTAATTTGATGCCAAAAAATTGGGGATTTGGACAGACTTTTGATGGAAAGAT 827
|||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 714 AGATTTTAATAATGTGATGCCAAACAATTGGGGATTTGGACAGACTTTTGATGGAAAGAT 773
Query 828 TAATTTTTAG 837
||| ||||||
Sbjct 774 TAACTTTTAG 783
> AT5G39280.1 | Symbols: ATEXPA23, ATEXP23, ATHEXP ALPHA 1.17,
EXPA23 | expansin A23 | chr5:15730713-15731706 REVERSE LENGTH=780
Length=780
Score = 1050 bits (568), Expect = 0.0
Identities = 718/790 (91%), Gaps = 11/790 (1%)
Strand=Plus/Plus
Query 49 ATGGCGACATGGTTCGTGTCCATGAGTTATGGTCATCGAGCGATGATGGTTAGTGATGTA 108
||||| |||| ||| |||||||||||||| |||||||||||||||| ||| |||||||
Sbjct 1 ATGGCTACATTGTTAGTGTCCATGAGTTACGGTCATCGAGCGATGA---TTAATGATGTA 57
Query 109 GCCGAAGCACCCGTGATTGACGATGTAGTAGGAAGCCCAACCAACGGACTCGACACTTCT 168
||||||||||||||| ||||||||||||| ||||| | ||||||||||||| ||||
Sbjct 58 GCCGAAGCACCCGTGTTTGACGATGTAGT---CAGCCC-A--AACGGACTCGACAGTTCT 111
Query 169 TGGTATGACGCACGAGCAACATTTTACGGTGATATCCATGGTGGAGAAACTCAACAGGGA 228
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 112 TGGTATGATGCACGAGCAACATTTTACGGTGATATCCATGGTGGAGAAACTCAACAGGGA 171
Query 229 GCTTGTGGATACGGTGATTTATTCAGACAAGGCTATGGTCTAGCCACATCGGCATTGAGC 288
|| ||||||||||||||| |||||| ||||||||||||||||| ||| |||||||||||
Sbjct 172 GCGTGTGGATACGGTGATCTATTCAAACAAGGCTATGGTCTAGAGACAGCGGCATTGAGC 231
Query 289 ACAGCACTCTTCAATGAAGGGTACACATGTGGGGCTTGTTACGAGATCATGTGTGCGAAC 348
|||||||||||||| |||||||| |||||||||||||||||| |||||||||||| ||||
Sbjct 232 ACAGCACTCTTCAACGAAGGGTATACATGTGGGGCTTGTTACCAGATCATGTGTGTGAAC 291
Query 349 AATCCACAATGGTGTTTGCCCGGATCCATTAAGATCACTGCTACAAATTTCTGTCCACCA 408
|||||||||||||||| ||||||||| | |||||||| || || |||||||||||||||
Sbjct 292 GATCCACAATGGTGTTTACCCGGATCCGTCAAGATCACAGCAACTAATTTCTGTCCACCA 351
Query 409 AATTACACCAAAACCGTCGGCGTTTGGTGCAACCCACCCCAAAAGCATTTTGATCTCTCC 468
|||||| |||||||| |||||||||||||||||||| |||||||| ||||| ||||||
Sbjct 352 GATTACAGCAAAACCGAAGGCGTTTGGTGCAACCCACCACAAAAGCACTTTGACCTCTCC 411
Query 469 TTACCAATGTTCCTCAAGATCGCCCAGTACAAAGCTGGGGTTGTTCCAGTTAGATACAGA 528
||||||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||||
Sbjct 412 CTACCAATGTTCCTCAAGATCGCCCAATACAAAGCTGGAGTTGTCCCAGTTAAATACAGA 471
Query 529 CGTGTTGCTTGTGCAAAAACTGGTGGTGTCAAGTTTGAAACCAAAGGAAACCCTTATTTC 588
||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 472 CGTATTTCTTGTGCAAGAACTGGTGGTGTCAAGTTTGAAACCAAAGGAAACCCTTATTTC 531
Query 589 TTAATGATATTGCCATACAATGTAGGAGGAGCTGGAGATATTAAGTTCG-TGCAAGTTAA 647
|||||||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||
Sbjct 532 TTAATGATCTTGCCATACAATGTAGGAGGAGCTGGAGATATCAAGTT-GATGCAAGTTAA 590
Query 648 AGGAAACAAAACCGGGTGGATAACAATGAAAAAGAATTGGGGACAGAATTGGACCACTGG 707
|||| |||| |||||||||||||||||| ||||||| |||||||| || |||||||||||
Sbjct 591 AGGAGACAAGACCGGGTGGATAACAATGCAAAAGAACTGGGGACAAAACTGGACCACTGG 650
Query 708 TGTTAAGTTAACGGGTCAGGGTATATCGTTAAGGGTTACAACGAGTGATGGGATTACAAA 767
|||||| || || ||||||||||| || || |||||||| |||||||||||| |||||||
Sbjct 651 TGTTAATTTGACTGGTCAGGGTATTTCATTCAGGGTTACGACGAGTGATGGGGTTACAAA 710
Query 768 AGATTTTATTAATTTGATGCCAAAAAATTGGGGATTTGGACAGACTTTTGATGGAAAGAT 827
|||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 711 AGATTTTAATAATGTGATGCCAAACAATTGGGGATTTGGACAGACTTTTGATGGAAAGAT 770
Query 828 TAATTTTTAG 837
||| ||||||
Sbjct 771 TAACTTTTAG 780
> AT5G39270.1 | Symbols: ATEXPA22, EXP22, ATEXP22, ATHEXP ALPHA
1.15, EXPA22 | expansin A22 | chr5:15729118-15730150 REVERSE
LENGTH=792
Length=792
Score = 811 bits (439), Expect = 0.0
Identities = 690/807 (86%), Gaps = 33/807 (4%)
Strand=Plus/Plus
Query 49 ATGGCGACATGGTTCGTGTCCATGAGTTATGGTCATCGAGCGATGATGGTTAGTGATGTA 108
|||| || |||| ||||| |||||||||| |||||| ||||||||| || || ||| |
Sbjct 1 ATGGTGATATGGGTCGTGCCCATGAGTTACGGTCATGGAGCGATGA---TTGGTAATGCA 57
Query 109 GCCGAAGCACCCGTGATTG-A-C-GATGTAGTA-GG---AA-G-CCCAACCAACGG-ACT 158
| ||||||| || ||| || | | || | | | || || | ||||| ||| || |||
Sbjct 58 GTCGAAGCA-CC-TGA-TGTAGCGGAAGCACCAGGGATTAATGACCCAAGCAA-GGCACT 113
Query 159 CGACACTTCTTGGTATGACGCACGAGCAACATTTTACGGTGATATCCATGGTGGAGAAAC 218
||||||| |||||||||||||||||| || || |||||||| ||||||||||| || ||
Sbjct 114 CGACACTAATTGGTATGACGCACGAGCCACGTTCTACGGTGACATCCATGGTGGCGACAC 173
Query 219 TCAACAGGGAGCTTGTGGATACGGTGATTTATTCAGACAAGGCTATGGTCTAGCCACATC 278
||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |
Sbjct 174 TCAACAGGGAGCTTGTGGATACGGTAATCTATTCAGACAAGGCTATGGTCTAGCCACCGC 233
Query 279 GGCATTGAGCACAGCACTCTTCAATGAAGGGTACACATGTGGGGCTTGTTACGAGATCAT 338
|| || || || ||||||||||| || ||||||||||||||||||||||| || |||||
Sbjct 234 AGCGTTAAGTACGGCACTCTTCAACGACGGGTACACATGTGGGGCTTGTTATGAAATCAT 293
Query 339 GTGTGCGAACAATCCACAATGGTGTTTGCCCGGATCCATTAAGATCACTGCTACAAATTT 398
||| || |||||||||||||||| ||||||||| | |||||||| || ||||| ||
Sbjct 294 GTGCACGCGTGATCCACAATGGTGTTTACCCGGATCCGTCAAGATCACAGCAACAAACTT 353
Query 399 CTGTCCAC-CAAATTACACCAAAACCGTC-GGCGTTTGGTGCAACCCACCCCA-AAAGCA 455
|||||| | ||||||||| ||||||| | | | |||||||||||||||| || ||| ||
Sbjct 354 CTGTCC-CGCAAATTACAGCAAAACC-ACAGACCTTTGGTGCAACCCACCACAGAAA-CA 410
Query 456 TTTTGATCTCTCCTTACCAATGTTCCTCAAGATCGCCCAGTACAAAGCTGGGGTTGTTCC 515
||||||||||||||| ||||||| |||||||| ||| |||||||||| |||||||| ||
Sbjct 411 CTTTGATCTCTCCTTAGCAATGTTTCTCAAGATTGCCAAGTACAAAGCCGGGGTTGTCCC 470
Query 516 AGTTAGATACAGACGTGTTGCTTGT-GCAAAAACTGGTGGTGTCAAGTTTGAAACCAAAG 574
|||||||||||||||| || ||||| || |||||||||||||||||||||||||||||||
Sbjct 471 AGTTAGATACAGACGTATTCCTTGTAGC-AAAACTGGTGGTGTCAAGTTTGAAACCAAAG 529
Query 575 GAAACCCTTATTTCTTAATGATATTGCCATACAATGTAGGAGGAGCTGGAGATATTAAGT 634
|||||||||||||||||||| | ||| |||||| |||||||||||||||||||||||||
Sbjct 530 GAAACCCTTATTTCTTAATGGTCTTGATATACAACGTAGGAGGAGCTGGAGATATTAAGT 589
Query 635 TCGTGCAAGTTAAAGGAAACAAAACCGGGTGGATAACAATGAAAAAGAATTGGGGACAGA 694
||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||
Sbjct 590 ACGTGCAAGTTAAAGGAAACAAGACCGGGTGGATAACAATGAAAAAGAACTGGGGGCAGA 649
Query 695 ATTGGACCACTGGTGTTA-AGT-TA-ACGGGTCAGGGTATATCGTTAAGGGTTACAACGA 751
||||||||||| | | | ||| | || || || ||| ||||||| |||||||||||||
Sbjct 650 ATTGGACCACTA-T-T-ACAGTATTGACCGGCCAAGGTTTATCGTTCAGGGTTACAACGA 706
Query 752 GTGATGGGATTACAAAAGATTTTATT-AATTTGATGCCAAAAAATTGGGGATTTGGACAG 810
||||||||||||||||||||||| | ||| ||||||||||||||||||| |||||||||
Sbjct 707 GTGATGGGATTACAAAAGATTTT-TGGAATGTGATGCCAAAAAATTGGGGGTTTGGACAG 765
Query 811 ACTTTTGATGGAAAGATTAATTTTTAG 837
||||||||||| | |||||| ||||||
Sbjct 766 ACTTTTGATGGTAGGATTAACTTTTAG 792
> AT5G39290.1 | Symbols: ATEXP26, EXP26, ATHEXP ALPHA 1.16 | expansin
A26 | chr5:15735871-15736908 REVERSE LENGTH=792
Length=792
Score = 787 bits (426), Expect = 0.0
Identities = 684/805 (85%), Gaps = 31/805 (4%)
Strand=Plus/Plus
Query 49 ATGGCGACATGGTTCGTGTCC-ATGAGTTATGGTCATCGAGCGATGATGGTTAGTGATGT 107
||||||| ||| ||||| || |||||||| |||||| ||||||||| || || |||
Sbjct 1 ATGGCGATGTGGGTCGTG-CCAATGAGTTACGGTCATGGAGCGATGA---TTGGTAATGC 56
Query 108 AGCCGAAGCACCCGTGAT-T-GACGATGTA----GTAGGAA-G-CCCAACCAACGG-ACT 158
|| ||||||| || |||| | | ||| | | | | || | ||||| ||| || |||
Sbjct 57 AGTCGAAGCA-CC-TGATGTAGCCGAAGCACCCGGGATTAATGACCCAAGCAA-GGCACT 113
Query 159 CGACACTTCTTGGTATGACGCACGAGCAACATTTTACGGTGATATCCATGGTGGAGAAAC 218
|||| || |||||||||||||||||| || || |||||||| |||||||||||||| ||
Sbjct 114 CGACCCTAATTGGTATGACGCACGAGCCACGTTCTACGGTGACATCCATGGTGGAGACAC 173
Query 219 TCAACAGGGAGCTTGTGGATACGGTGATTTATTCAGACAAGGCTATGGTCTAGCCACATC 278
||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |
Sbjct 174 TCAACAGGGAGCTTGTGGATACGGTAATCTATTCAGACAAGGCTATGGTCTAGCCACAGC 233
Query 279 GGCATTGAGCACAGCACTCTTCAATGAAGGGTACACATGTGGGGCTTGTTACGAGATCAT 338
|| || || || ||||||||||| || ||||||||||||||||||||||| || |||||
Sbjct 234 AGCGTTAAGTACGGCACTCTTCAACGACGGGTACACATGTGGGGCTTGTTATGAAATCAT 293
Query 339 GTGTGCGAACAATCCACAATGGTGTTTGCCCGGATCCATTAAGATCACTGCTACAAATTT 398
||| || |||||||||||||||| ||||||||| | |||||||| || ||||| ||
Sbjct 294 GTGCACGCGTGATCCACAATGGTGTTTACCCGGATCCGTCAAGATCACAGCAACAAACTT 353
Query 399 CTGTCCAC-CAAATTACACCAAAACCGTC-GGCGTTTGGTGCAACCCACCCCA-AAAGCA 455
|||||| | ||||||||| ||||||| | | | |||||||||| ||||| || ||| ||
Sbjct 354 CTGTCC-CGCAAATTACAGCAAAACC-ACAGACCTTTGGTGCAATCCACCACAGAAA-CA 410
Query 456 TTTTGATCTCTCCTTACCAATGTTCCTCAAGATCGCCCAGTACAAAGCTGGGGTTGTTCC 515
||||||||||||||| ||||||| |||||||| ||| |||||||||| |||||||| ||
Sbjct 411 CTTTGATCTCTCCTTAGCAATGTTTCTCAAGATTGCCAAGTACAAAGCCGGGGTTGTCCC 470
Query 516 AGTTAGATACAGACGTGTTGCTTGT-GCAAAAACTGGTGGTGTCAAGTTTGAAACCAAAG 574
|||||||||||||||| || ||||| || |||||||||||||||||||||||||||||||
Sbjct 471 AGTTAGATACAGACGTATTCCTTGTAGC-AAAACTGGTGGTGTCAAGTTTGAAACCAAAG 529
Query 575 GAAACCCTTATTTCTTAATGATATTGCCATACAATGTAGGAGGAGCTGGAGATATTAAGT 634
|||||||||||||||||||| | ||| |||||| |||||||||||||||||||||||||
Sbjct 530 GAAACCCTTATTTCTTAATGGTCTTGATATACAACGTAGGAGGAGCTGGAGATATTAAGT 589
Query 635 TCGTGCAAGTTAAAGGAAACAAAACCGGGTGGATAACAATGAAAAAGAATTGGGGACAGA 694
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||
Sbjct 590 ACGTGCAAGTTAAAGAAAACAAGACCGGGTGGATAACAATGAAAAAGAACTGGGGGCAGA 649
Query 695 ATTGGACCACTGGTGTTAAGT-TA-ACGGGTCAGGGTATATCGTTAAGGGTTACAACGAG 752
||||||||||| || | || | || || || ||| | ||||| || ||||| ||||
Sbjct 650 ATTGGACCACTAGTAC-A-GTATTGACCGGCCAAGGTTTGTCGTTCAGAGTTACGACGAC 707
Query 753 TGATGGGATTACAAAAGATTTTATT-AATTTGATGCCAAAAAATTGGGGATTTGGACAGA 811
|||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||
Sbjct 708 TGATGGGATTACAAAAGATTTT-TGGAATGTGATGCCAAAAAATTGGGGATTTGGACAGA 766
Query 812 CTTTTGATGGAAAGATTAATTTTTA 836
|||||||||| |||||||| |||||
Sbjct 767 CTTTTGATGGTAAGATTAACTTTTA 791
> AT5G39260.1 | Symbols: ATEXPA21, EXP21, ATEXP21, ATHEXP ALPHA
1.20, EXPA21 | expansin A21 | chr5:15726378-15727458 REVERSE
LENGTH=932
Length=932
Score = 521 bits (282), Expect = 3e-147
Identities = 569/703 (81%), Gaps = 38/703 (5%)
Strand=Plus/Plus
Query 147 AACCAACGGACTCGACACTTCTTGGTATGACGCACGAGCAACATTTTACGGTGATATCCA 206
|||||||||||| || ||| |||||||||| || ||||| ||| ||| |||||||||||
Sbjct 153 AACCAACGGACTTGATACTGCTTGGTATGATGCGCGAGCCGCATATTATGGTGATATCCA 212
Query 207 TGGTGGAGAAACTCAAC-AG--GGAGCTTGTGGATACGGTGATTTATTCAGACAAGGCTA 263
|||||||| ||| ||| || ||||||||||||||||||||| || || ||| || ||
Sbjct 213 TGGTGGAGGCACTGAACTAGAAGGAGCTTGTGGATACGGTGATCTAAACAAACATGGATA 272
Query 264 TGGTCTAGCCACATCGGCATTGAGCACAGCACTCTTCAATGA-AGGGTACACATGTGGGG 322
||||||||||||| | ||||||||||| || |||||||| | ||| | |||||||||
Sbjct 273 TGGTCTAGCCACAGCAGCATTGAGCACGGCGCTCTTCAA-CAGCGGGGCCTCATGTGGGG 331
Query 323 CTTGTTACGAGATCATGTG-TGCGAAC-AATCCACAATGG-TGTTTGCCCGGATCCATTA 379
||||||||||||||||||| | | | ||||||||| || |||||| ||||||| || |
Sbjct 332 CTTGTTACGAGATCATGTGCT-C-TCCTAATCCACAA-GGATGTTTGTCCGGATCTATCA 388
Query 380 AGATCACTGCTACAAATTTCTGTCCACCAAATTACACCAAAACCGTCGGCGTTTGGTGCA 439
||||||| || ||| |||| ||| | ||||| | || || |||||||
Sbjct 389 AGATCACAGCAACAGATTTATGT----C------CACCAGGA---TC--CGCTTGGTGCT 433
Query 440 ACCCACCCCAA-AAGCATTTTGATCTCTCCTTACCAATGTTCCTCAAGATCGCCCA-GTA 497
||| | || || || || |||||||||||||||||||||||| |||||||||| || ||
Sbjct 434 ACCTA-CCAAATAAACACTTTGATCTCTCCTTACCAATGTTCATCAAGATCGCTCAGGT- 491
Query 498 CAAAGCTGGGGTTGTTCCAGTTAGATACAGACGTGTTGCTTGTGCAAAAACTGGTGGTGT 557
|||||| | | || || |||||||||||||||||| | ||||| ||||| ||||||||
Sbjct 492 CAAAGCCAAGATGGTCCCGGTTAGATACAGACGTGTTCCCTGTGCGAAAACCGGTGGTGT 551
Query 558 CAAGTTTGAAACCAAAGGAAACCCTTATTTCTTAATGATATTGCCATACAATGTAGGAGG 617
|||||||||| |||||||||||| || |||||| ||| ||||| ||||||||||||||
Sbjct 552 CAAGTTTGAAGTTAAAGGAAACCCTAATATCTTAACGATCTTGCCGTACAATGTAGGAGG 611
Query 618 AGCTGGAGATATTA-AGTTCGTG-CAAGTTAAAGGAAACAAAACCGGGTGGATAACAATG 675
||| |||||||||| || |||| | | ||| |||| |||||||| |||| || ||||
Sbjct 612 AGCAGGAGATATTATAG-CCGTGTC-TGCTAAGGGAAGCAAAACCGCGTGGGTAGTAATG 669
Query 676 AAAAAGA-ATTGGGGACAGAATTGGACCACTGGTGTTAAGT-TAACGGGTCAGGGTATAT 733
| ||| |||||||||| |||||||| ||| |||||| | |||| ||||| || |||
Sbjct 670 -AGCAGATATTGGGGACAAAATTGGACTACTAATGTTAA-TCTAACCGGTCAAAGTGTAT 727
Query 734 CGTTAAGGGTTACAACGAGTGATGGGATTACAAAAGATTTTATTAATTTGATGCCAAAAA 793
| |||||||||||||||||||||||||||||||| ||||||| | || |||||||| ||
Sbjct 728 CATTAAGGGTTACAACGAGTGATGGGATTACAAAGGATTTTACTGATGTGATGCCAGCAA 787
Query 794 ATTGGGGATTTGGACAGACTTTTGATGGAAAGATTAATTTTTA 836
|||||||||||| ||||||||||||||||||| ||| |||||
Sbjct 788 GTTGGGGATTTGGGCAGACTTTTGATGGAAAGACTAACTTTTA 830
Score = 104 bits (56), Expect = 1e-21
Identities = 79/90 (88%), Gaps = 2/90 (2%)
Strand=Plus/Plus
Query 1 ATGAAACT-CTTAGGAAAAATGATATATGTAGAATGTTTTATGATAATAATGGCGACATG 59
|||||| | | ||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 43 ATGAAATTGC-TAGAAAAAATGACATATGTAGAATGTTTTATGATAATAATGGCGACATG 101
Query 60 GTTCGTGTCCATGAGTTATGGTCATCGAGC 89
|||| ||| ||| ||||| ||||| ||||
Sbjct 102 GTTCATGTTCATAAGTTACAGTCATGGAGC 131
> AT5G39310.1 | Symbols: ATEXPA24, EXP24, ATEXP24, ATHEXP ALPHA
1.19, EXPA24 | expansin A24 | chr5:15739280-15740514 REVERSE
LENGTH=891
Length=891
Score = 468 bits (253), Expect = 4e-131
Identities = 533/666 (80%), Gaps = 27/666 (4%)
Strand=Plus/Plus
Query 187 ACATTTTACGGTGATATCCATGGTGGAGAAACTCAACAGGGAGCTTGTGGATACGGTGAT 246
||||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct 238 ACATTCTACGGTGACATCAATGGTGGAGAAACTCAACAGGGAGCTTGTGGATATGGTGAT 297
Query 247 TTATTCAGACAAGGCTATGGTCTAGCCACATCGGCATTGAGCACAGCACTCTTCAATGAA 306
|| || |||||| |||||||||| || | ||| | ||||| ||||| || || ||
Sbjct 298 CTACACAAACAAGGATATGGTCTAGAGACCGCAGCACTAAGCACCGCACTATTTAAC-AA 356
Query 307 GGG-TACACA--TGTGGGGCTTGTTACGAGATCATGTGTGCGAACAA--TCCACAATGGT 361
|| | || | |||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 357 CGGCT-CA-AGGTGTGGGGCTTGTTACGAGATCATGTG--CGAACACGCTCCACAATGGT 412
Query 362 GTTTGCCCGGATCCATTAAGATCACTGCTACAAATTTCTGTCCACCAAATTACACCAAAA 421
||||||| || ||||| |||||||| |||||||| |||||||||||| ||| |||||
Sbjct 413 GTTTGCCAGGTTCCATCAAGATCACAGCTACAAACTTCTGTCCACCAGATTTTACCAAGC 472
Query 422 CCG-TCGGCGTTTGGTGCAACCCACCCCAAAAGCATTTTGATCTCTC-CTTACCAATGTT 479
|| | | | |||||||||||| || ||||| || ||||||||||| | |||||||||
Sbjct 473 CCAAT-GACAATTGGTGCAACCCGCCACAAAAACACTTTGATCTCTCGCA-ACCAATGTT 530
Query 480 CCTCAAGATCGCCCAGTACAAAGCTGGGGTTGTTCCAGTTAGATACAGACGTGTTGCTTG 539
|||||| || || | |||||||| |||||||| || |||| || ||||||||| ||||
Sbjct 531 CCTCAAAATAGCTAAATACAAAGCCGGGGTTGTCCCGGTTAAATTTAGACGTGTTCCTTG 590
Query 540 TGCAAAAA-CTGGTGGTGTCAAGTTTGAAACCAAAGGAAACCCTTATTTCTTAATGATAT 598
||| |||| | || |||||||||||||||| ||| ||||| ||| ||||||||||||| |
Sbjct 591 TGCGAAAATC-GGAGGTGTCAAGTTTGAAATCAAGGGAAATCCTCATTTCTTAATGATCT 649
Query 599 TGCCATACAATGTAGGAGGAGCTGGAGATATTAAGT-TCGTGCAAGTTAAAGGAAACAAA 657
| || |||||||||||||||||||||| | ||| | | ||||| |||| |||| |||
Sbjct 650 TACCGTACAATGTAGGAGGAGCTGGAGCTGTTAGGGCTA-TGCAAATTAAGGGAA-CAAG 707
Query 658 -ACCGGGTGGATAACAATGAAAAAGAATTGGGGACAGAATTGGACCACTGGTGTTAAGTT 716
||| |||||| | ||||| |||||||||||||||| ||||| |||||||||| |||
Sbjct 708 GACCCAGTGGATTGCGATGAAGAAGAATTGGGGACAGATTTGGAGCACTGGTGTTGTGTT 767
Query 717 AACGGGTCAGGGTATATCGTTAAGGGTTACAACGAGTGATGG-GATTACAAAAGATTTTA 775
|| || || || ||||||| ||| |||| || |||||||| | ||| ||||| ||||
Sbjct 768 GACCGGACAATGTTTATCGTTTAGGCTTACCACAAGTGATGGAG-TTATGAAAGAGTTTA 826
Query 776 TTAAT-TTGATGCCAAAAAATTGGGGAT-T--TGGACAGACTTTTGATGGAAAGATTAAT 831
|| || || | || | ||| || | |||||||| ||||||||||||| |||||
Sbjct 827 TTGATGTT-ACACCGCCGGACTGGAAATGTAATGGACAGAGTTTTGATGGAAAGGTTAAT 885
Query 832 TTTTAG 837
||||||
Sbjct 886 TTTTAG 891
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 40790127364
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5