BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg330566
Length=840
Score E
Sequences producing significant alignments: (Bits) Value
AT5G39290.1 | Symbols: ATEXP26, EXP26, ATHEXP ALPHA 1.16 | expa... 1090 0.0
AT5G39270.1 | Symbols: ATEXPA22, EXP22, ATEXP22, ATHEXP ALPHA 1... 1086 0.0
AT5G39300.1 | Symbols: ATEXPA25, EXP25, ATEXP25, ATHEXP ALPHA 1... 826 0.0
AT5G39280.1 | Symbols: ATEXPA23, ATEXP23, ATHEXP ALPHA 1.17, E... 824 0.0
AT5G39310.1 | Symbols: ATEXPA24, EXP24, ATEXP24, ATHEXP ALPHA 1... 479 2e-134
> AT5G39290.1 | Symbols: ATEXP26, EXP26, ATHEXP ALPHA 1.16 | expansin
A26 | chr5:15735871-15736908 REVERSE LENGTH=792
Length=792
Score = 1090 bits (590), Expect = 0.0
Identities = 730/797 (92%), Gaps = 12/797 (2%)
Strand=Plus/Plus
Query 49 ATGGCGGTGTGGGTCGTACCCATGAGTTACGGTCATGGAGCGATGATTCATGATGCAGCC 108
|||||| |||||||||| || ||||||||||||||||||||||||||| | |||||| |
Sbjct 1 ATGGCGATGTGGGTCGTGCCAATGAGTTACGGTCATGGAGCGATGATTGGTAATGCAGTC 60
Query 109 GAAGCACCCGATGTAGCTGAAGCACCCGGGATTAATGGCCCAAGCAAGACACTCGACACT 168
|||||||| |||||||| ||||||||||||||||||| |||||||||| |||||||| ||
Sbjct 61 GAAGCACCTGATGTAGCCGAAGCACCCGGGATTAATGACCCAAGCAAGGCACTCGACCCT 120
Query 169 AATTGGTATGACGCACGGGCCACATTCTACGGTGACATCCATGGTGGAGAAACTCAACAG 228
||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||
Sbjct 121 AATTGGTATGACGCACGAGCCACGTTCTACGGTGACATCCATGGTGGAGACACTCAACAG 180
Query 229 GGAGCTTGTGGATACGGTAATCTGTTTAGACAAGGCTATGGTCTAGCCACAGCAGCGTTA 288
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 181 GGAGCTTGTGGATACGGTAATCTATTCAGACAAGGCTATGGTCTAGCCACAGCAGCGTTA 240
Query 289 AGCACGGCACTCTTCAACGACGGGTACACATGTGGCGCTTGTTACGAAATCATGTGCGCG 348
|| |||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||
Sbjct 241 AGTACGGCACTCTTCAACGACGGGTACACATGTGGGGCTTGTTATGAAATCATGTGCACG 300
Query 349 CGTGATCCACAATGGTGTTTACCCGGATCTATCAAGATTACAGCAACAAATTTCTGTCCA 408
||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||
Sbjct 301 CGTGATCCACAATGGTGTTTACCCGGATCCGTCAAGATCACAGCAACAAACTTCTGTCC- 359
Query 409 C-CAAATTACACCAAAACCGTTGATGTTTGGTGCAACCCACCACA-AAAGCACTTTGATC 466
| ||||||||| ||||||| || |||||||||| |||||||| ||| ||||||||||
Sbjct 360 CGCAAATTACAGCAAAACCACAGACCTTTGGTGCAATCCACCACAGAAA-CACTTTGATC 418
Query 467 TCT-CTCTACCGATGTTTCTCAAGATCGCCAAGTTCAAGGCCGGGGTTGTCCCAGTCAGA 525
||| || || | |||||||||||||| ||||||| ||| ||||||||||||||||| |||
Sbjct 419 TCTCCT-TAGCAATGTTTCTCAAGATTGCCAAGTACAAAGCCGGGGTTGTCCCAGTTAGA 477
Query 526 TACAGACGTGTTCTTTGT-GCAAAAACTGGTGGAGTCAAGTTTGAAACCAAAGGAAACCC 584
||||||||| ||| |||| || ||||||||||| ||||||||||||||||||||||||||
Sbjct 478 TACAGACGTATTCCTTGTAGC-AAAACTGGTGGTGTCAAGTTTGAAACCAAAGGAAACCC 536
Query 585 TTATTTCTTAATGGTCTTGCTATACAATGTAGGAGGAGCTGGAGATGTTAAGTTCGTGCA 644
||||||||||||||||||| ||||||| |||||||||||||||||| |||||| ||||||
Sbjct 537 TTATTTCTTAATGGTCTTGATATACAACGTAGGAGGAGCTGGAGATATTAAGTACGTGCA 596
Query 645 AGTTAAAGGAAACAAGACCGGGTGGATAACAATGAAAAAGAACTGGGGGCAGAATTGGAC 704
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 AGTTAAAGAAAACAAGACCGGGTGGATAACAATGAAAAAGAACTGGGGGCAGAATTGGAC 656
Query 705 CACT-GATACAGTATTGACCGGCCAAGGTTTATCGTTTAGGGTTACGACGAGTGATGGGG 763
|||| | |||||||||||||||||||||||| ||||| || |||||||||| |||||||
Sbjct 657 CACTAG-TACAGTATTGACCGGCCAAGGTTTGTCGTTCAGAGTTACGACGACTGATGGGA 715
Query 764 TTACAAAAGATTTTATT-AATCTGATGCCAAAAAATTGGGGATTTGGACAGACTTTTGTT 822
|||||||||||||| | ||| |||||||||||||||||||||||||||||||||||| |
Sbjct 716 TTACAAAAGATTTT-TGGAATGTGATGCCAAAAAATTGGGGATTTGGACAGACTTTTGAT 774
Query 823 GGAAAGATTAACTTTTA 839
|| ||||||||||||||
Sbjct 775 GGTAAGATTAACTTTTA 791
> AT5G39270.1 | Symbols: ATEXPA22, EXP22, ATEXP22, ATHEXP ALPHA
1.15, EXPA22 | expansin A22 | chr5:15729118-15730150 REVERSE
LENGTH=792
Length=792
Score = 1086 bits (588), Expect = 0.0
Identities = 724/789 (92%), Gaps = 12/789 (2%)
Strand=Plus/Plus
Query 58 TGGGTCGTACCCATGAGTTACGGTCATGGAGCGATGATTCATGATGCAGCCGAAGCACCC 117
|||||||| |||||||||||||||||||||||||||||| | |||||| |||||||||
Sbjct 10 TGGGTCGTGCCCATGAGTTACGGTCATGGAGCGATGATTGGTAATGCAGTCGAAGCACCT 69
Query 118 GATGTAGCTGAAGCACCCGGGATTAATGGCCCAAGCAAGACACTCGACACTAATTGGTAT 177
|||||||| |||||||| |||||||||| |||||||||| ||||||||||||||||||||
Sbjct 70 GATGTAGCGGAAGCACCAGGGATTAATGACCCAAGCAAGGCACTCGACACTAATTGGTAT 129
Query 178 GACGCACGGGCCACATTCTACGGTGACATCCATGGTGGAGAAACTCAACAGGGAGCTTGT 237
|||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 130 GACGCACGAGCCACGTTCTACGGTGACATCCATGGTGGCGACACTCAACAGGGAGCTTGT 189
Query 238 GGATACGGTAATCTGTTTAGACAAGGCTATGGTCTAGCCACAGCAGCGTTAAGCACGGCA 297
|||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 190 GGATACGGTAATCTATTCAGACAAGGCTATGGTCTAGCCACCGCAGCGTTAAGTACGGCA 249
Query 298 CTCTTCAACGACGGGTACACATGTGGCGCTTGTTACGAAATCATGTGCGCGCGTGATCCA 357
|||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||
Sbjct 250 CTCTTCAACGACGGGTACACATGTGGGGCTTGTTATGAAATCATGTGCACGCGTGATCCA 309
Query 358 CAATGGTGTTTACCCGGATCTATCAAGATTACAGCAACAAATTTCTGTCCAC-CAAATTA 416
|||||||||||||||||||| ||||||| ||||||||||| |||||||| | |||||||
Sbjct 310 CAATGGTGTTTACCCGGATCCGTCAAGATCACAGCAACAAACTTCTGTCC-CGCAAATTA 368
Query 417 CACCAAAACCGTTGATGTTTGGTGCAACCCACCACA-AAAGCACTTTGATCTCT-CTCTA 474
|| ||||||| || ||||||||||||||||||| ||| ||||||||||||| || ||
Sbjct 369 CAGCAAAACCACAGACCTTTGGTGCAACCCACCACAGAAA-CACTTTGATCTCTCCT-TA 426
Query 475 CCGATGTTTCTCAAGATCGCCAAGTTCAAGGCCGGGGTTGTCCCAGTCAGATACAGACGT 534
| |||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||
Sbjct 427 GCAATGTTTCTCAAGATTGCCAAGTACAAAGCCGGGGTTGTCCCAGTTAGATACAGACGT 486
Query 535 GTTCTTTGT-GCAAAAACTGGTGGAGTCAAGTTTGAAACCAAAGGAAACCCTTATTTCTT 593
||| |||| || ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 487 ATTCCTTGTAGC-AAAACTGGTGGTGTCAAGTTTGAAACCAAAGGAAACCCTTATTTCTT 545
Query 594 AATGGTCTTGCTATACAATGTAGGAGGAGCTGGAGATGTTAAGTTCGTGCAAGTTAAAGG 653
|||||||||| ||||||| |||||||||||||||||| |||||| |||||||||||||||
Sbjct 546 AATGGTCTTGATATACAACGTAGGAGGAGCTGGAGATATTAAGTACGTGCAAGTTAAAGG 605
Query 654 AAACAAGACCGGGTGGATAACAATGAAAAAGAACTGGGGGCAGAATTGGACCACTGAT-A 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 606 AAACAAGACCGGGTGGATAACAATGAAAAAGAACTGGGGGCAGAATTGGACCACT-ATTA 664
Query 713 CAGTATTGACCGGCCAAGGTTTATCGTTTAGGGTTACGACGAGTGATGGGGTTACAAAAG 772
|||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||
Sbjct 665 CAGTATTGACCGGCCAAGGTTTATCGTTCAGGGTTACAACGAGTGATGGGATTACAAAAG 724
Query 773 ATTTTATT-AATCTGATGCCAAAAAATTGGGGATTTGGACAGACTTTTGTTGGAAAGATT 831
||||| | ||| ||||||||||||||||||| |||||||||||||||| ||| | ||||
Sbjct 725 ATTTT-TGGAATGTGATGCCAAAAAATTGGGGGTTTGGACAGACTTTTGATGGTAGGATT 783
Query 832 AACTTTTAG 840
|||||||||
Sbjct 784 AACTTTTAG 792
> AT5G39300.1 | Symbols: ATEXPA25, EXP25, ATEXP25, ATHEXP ALPHA
1.18, EXPA25 | expansin A25 | chr5:15737427-15738387 REVERSE
LENGTH=783
Length=783
Score = 826 bits (447), Expect = 0.0
Identities = 672/779 (86%), Gaps = 21/779 (3%)
Strand=Plus/Plus
Query 68 CCATGAGTTACGGTCATGGAGCGATGATTCATGATGCAGCCGAAGCACCCGATGTAGCTG 127
||||||||||||||||| ||||||||||| |||||| |||||||||||||| || | ||
Sbjct 20 CCATGAGTTACGGTCATCGAGCGATGATTAATGATGTAGCCGAAGCACCCG-TG-A-TTG 76
Query 128 AAGCACCCGGGATTAATGGCCCAAGCAA-GACACTCGACACTAATTGGTATGACGCACGG 186
| || | | | |||||| ||| | |||||||| | ||||||||| |||||
Sbjct 77 -A-CA--ATGTAGGCA--GCCCAACCAACG-GACTCGACAGTTCTTGGTATGATGCACGA 129
Query 187 GCCACATTCTACGGTGACATCCATGGTGGAGAAACTCAACAGGGAGCTTGTGGATACGGT 246
|| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 130 GCAACATTTTACGGTGATATCCATGGTGGAGAAACTCAACAGGGAGCCTGTGGATACGGT 189
Query 247 AATCTGTTTAGACAAGGCTATGGTCTAGCCACAGCAGCGTTAAGCACGGCACTCTTCAAC 306
|| | || | ||||||||||||||||| ||||| || || ||||| ||||||||||||
Sbjct 190 GATTTATTCAAACAAGGCTATGGTCTAGAGACAGCGGCATTGAGCACAGCACTCTTCAAC 249
Query 307 GACGGGTACACATGTGGCGCTTGTTACGAAATCATGTGCGCGCGTGATCCACAATGGTGT 366
|| ||||| |||||||| ||||||||| | |||||||| | || || ||||||||||||
Sbjct 250 GAAGGGTATACATGTGGGGCTTGTTACCAGATCATGTGTGTGCACGACCCACAATGGTGT 309
Query 367 TTACCCGGATCTATCAAGATTACAGCAACAAATTTCTGTCCACCAAATTACACCAAAACC 426
||||||||| | ||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 310 TTACCCGGAACCATCAAGATTACAGCAACAAATTTCTGTCCACCAGATTACTCCAAAACC 369
Query 427 GTTGATGTTTGGTGCAACCCACCACAAAAGCACTTTGATCTCTCTCTACCGATGTTTCTC 486
| | |||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||
Sbjct 370 GAAGGCGTTTGGTGCAACCCACCACAAAAGCACTTTGACCTCTCCCTACCAATGTTCCTC 429
Query 487 AAGATCG-CCAAGTTCAAGGCCGGGGTTGTCCCAGTCAGATACAGACGT-GTTCTTTGTG 544
||||||| |||| | ||| || || ||||||||||| | |||||||||| ||| |||||
Sbjct 430 AAGATCGCCCAA-TACAAAGCTGGAGTTGTCCCAGTTAAATACAGACGTATTTC-TTGTG 487
Query 545 CAAAAACTGGTGGAGTCAAGTTTGAAACCAAAGGAAACCCTTATTTCTTAATGGTCTTGC 604
||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 488 CAAGAACTGGTGGTGTCAAGTTTGAAACCAAAGGAAACCCTTATTTCTTAATGATCTTGC 547
Query 605 TATACAATGTAGGAGGAGCTGGAGATGTTAAGTTCG-TGCAAGTTAAAGGAAACAAGACC 663
||||||||||||||| ||||||||| | ||||| | |||||||||||||| ||||||||
Sbjct 548 CATACAATGTAGGAGGCGCTGGAGATATCAAGTT-GATGCAAGTTAAAGGAGACAAGACC 606
Query 664 GGGTGGATAACAATGAAAAAGAACTGGGGGCAGAATTGGACCACTGATAC-AGTATTGAC 722
||||||||||||||| ||||||||||||| || || |||||||||| | | | |||||
Sbjct 607 GGGTGGATAACAATGCAAAAGAACTGGGGACAAAACTGGACCACTGGTGTTAAT-TTGAC 665
Query 723 CGGCCAAGGT-TTATCGTTTAGGGTTACGACGAGTGATGGGGTTACAAAAGATTTTATTA 781
|| || ||| || || || ||||||||||||||||||||||||||||||||||||| ||
Sbjct 666 TGGTCAGGGTATT-TCATTCAGGGTTACGACGAGTGATGGGGTTACAAAAGATTTTAATA 724
Query 782 ATCTGATGCCAAAAAATTGGGGATTTGGACAGACTTTTGTTGGAAAGATTAACTTTTAG 840
|| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 725 ATGTGATGCCAAACAATTGGGGATTTGGACAGACTTTTGATGGAAAGATTAACTTTTAG 783
> AT5G39280.1 | Symbols: ATEXPA23, ATEXP23, ATHEXP ALPHA 1.17,
EXPA23 | expansin A23 | chr5:15730713-15731706 REVERSE LENGTH=780
Length=780
Score = 824 bits (446), Expect = 0.0
Identities = 671/778 (86%), Gaps = 22/778 (3%)
Strand=Plus/Plus
Query 68 CCATGAGTTACGGTCATGGAGCGATGATTCATGATGCAGCCGAAGCACCCGATGTAGCTG 127
||||||||||||||||| ||||||||||| |||||| |||||||||||||| ||| ||
Sbjct 20 CCATGAGTTACGGTCATCGAGCGATGATTAATGATGTAGCCGAAGCACCCG-TGT--TTG 76
Query 128 AAGCACCCGGGATTAATGGCCCAAGCAAGACACTCGACACTAATTGGTATGACGCACGGG 187
| | | | | | | |||||| | | |||||||| | ||||||||| ||||| |
Sbjct 77 ACG-A---TGTAGTCA--GCCCAA--ACG-GACTCGACAGTTCTTGGTATGATGCACGAG 127
Query 188 CCACATTCTACGGTGACATCCATGGTGGAGAAACTCAACAGGGAGCTTGTGGATACGGTA 247
| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 128 CAACATTTTACGGTGATATCCATGGTGGAGAAACTCAACAGGGAGCGTGTGGATACGGTG 187
Query 248 ATCTGTTTAGACAAGGCTATGGTCTAGCCACAGCAGCGTTAAGCACGGCACTCTTCAACG 307
|||| || | ||||||||||||||||| ||||| || || ||||| |||||||||||||
Sbjct 188 ATCTATTCAAACAAGGCTATGGTCTAGAGACAGCGGCATTGAGCACAGCACTCTTCAACG 247
Query 308 ACGGGTACACATGTGGCGCTTGTTACGAAATCATGTGCGCGCGTGATCCACAATGGTGTT 367
| ||||| |||||||| ||||||||| | |||||||| | | ||||||||||||||||
Sbjct 248 AAGGGTATACATGTGGGGCTTGTTACCAGATCATGTGTGTGAACGATCCACAATGGTGTT 307
Query 368 TACCCGGATCTATCAAGATTACAGCAACAAATTTCTGTCCACCAAATTACACCAAAACCG 427
|||||||||| ||||||| |||||||| ||||||||||||||| |||||| ||||||||
Sbjct 308 TACCCGGATCCGTCAAGATCACAGCAACTAATTTCTGTCCACCAGATTACAGCAAAACCG 367
Query 428 TTGATGTTTGGTGCAACCCACCACAAAAGCACTTTGATCTCTCTCTACCGATGTTTCTCA 487
| |||||||||||||||||||||||||||||||| ||||| ||||| ||||| ||||
Sbjct 368 AAGGCGTTTGGTGCAACCCACCACAAAAGCACTTTGACCTCTCCCTACCAATGTTCCTCA 427
Query 488 AGATCG-CCAAGTTCAAGGCCGGGGTTGTCCCAGTCAGATACAGACGT-GTTCTTTGTGC 545
|||||| |||| | ||| || || ||||||||||| | |||||||||| ||| ||||||
Sbjct 428 AGATCGCCCAA-TACAAAGCTGGAGTTGTCCCAGTTAAATACAGACGTATTTC-TTGTGC 485
Query 546 AAAAACTGGTGGAGTCAAGTTTGAAACCAAAGGAAACCCTTATTTCTTAATGGTCTTGCT 605
|| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 486 AAGAACTGGTGGTGTCAAGTTTGAAACCAAAGGAAACCCTTATTTCTTAATGATCTTGCC 545
Query 606 ATACAATGTAGGAGGAGCTGGAGATGTTAAGTTCG-TGCAAGTTAAAGGAAACAAGACCG 664
||||||||||||||||||||||||| | ||||| | |||||||||||||| |||||||||
Sbjct 546 ATACAATGTAGGAGGAGCTGGAGATATCAAGTT-GATGCAAGTTAAAGGAGACAAGACCG 604
Query 665 GGTGGATAACAATGAAAAAGAACTGGGGGCAGAATTGGACCACTGATAC-AGTATTGACC 723
|||||||||||||| ||||||||||||| || || |||||||||| | | | |||||
Sbjct 605 GGTGGATAACAATGCAAAAGAACTGGGGACAAAACTGGACCACTGGTGTTAAT-TTGACT 663
Query 724 GGCCAAGGT-TTATCGTTTAGGGTTACGACGAGTGATGGGGTTACAAAAGATTTTATTAA 782
|| || ||| || || || ||||||||||||||||||||||||||||||||||||| |||
Sbjct 664 GGTCAGGGTATT-TCATTCAGGGTTACGACGAGTGATGGGGTTACAAAAGATTTTAATAA 722
Query 783 TCTGATGCCAAAAAATTGGGGATTTGGACAGACTTTTGTTGGAAAGATTAACTTTTAG 840
| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 723 TGTGATGCCAAACAATTGGGGATTTGGACAGACTTTTGATGGAAAGATTAACTTTTAG 780
> AT5G39310.1 | Symbols: ATEXPA24, EXP24, ATEXP24, ATHEXP ALPHA
1.19, EXPA24 | expansin A24 | chr5:15739280-15740514 REVERSE
LENGTH=891
Length=891
Score = 479 bits (259), Expect = 2e-134
Identities = 530/662 (80%), Gaps = 13/662 (2%)
Strand=Plus/Plus
Query 187 GCCACATTCTACGGTGACATCCATGGTGGAGAAACTCAACAGGGAGCTTGTGGATACGGT 246
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 235 GCCACATTCTACGGTGACATCAATGGTGGAGAAACTCAACAGGGAGCTTGTGGATATGGT 294
Query 247 AATCTGTTTAGACAAGGCTATGGTCTAGCCACAGCAGCGTTAAGCACGGCACTCTTCAAC 306
|||| | |||||| |||||||||| || ||||| ||||||| ||||| || |||
Sbjct 295 GATCTACACAAACAAGGATATGGTCTAGAGACCGCAGCACTAAGCACCGCACTATTTAAC 354
Query 307 GACGGGTACACA--TGTGGCGCTTGTTACGAAATCATGTGCGCGCGTGATCCACAATGGT 364
|||| | || | ||||| ||||||||||| |||||||||| | | |||||||||||
Sbjct 355 AACGGCT-CA-AGGTGTGGGGCTTGTTACGAGATCATGTGCGAACACGCTCCACAATGGT 412
Query 365 GTTTACCCGGATCTATCAAGATTACAGCAACAAATTTCTGTCCACCAAATTACACCAAAA 424
|||| || || || |||||||| ||||| ||||| |||||||||||| ||| |||||
Sbjct 413 GTTTGCCAGGTTCCATCAAGATCACAGCTACAAACTTCTGTCCACCAGATTTTACCAAGC 472
Query 425 CCGTTGATGTTTGGTGCAACCCACCACAAAAGCACTTTGATCTCTCTCTACCGATGTTTC 484
|| ||| |||||||||||| |||||||| |||||||||||||| | ||| ||||| |
Sbjct 473 CCAATGACAATTGGTGCAACCCGCCACAAAAACACTTTGATCTCTCGCAACCAATGTTCC 532
Query 485 TCAAGATCGCCAAGTTCAAGGCCGGGGTTGTCCCAGTCAGATACAGACGTGTTCTTTGTG 544
|||| || || || | ||| |||||||||||||| || | || |||||||||| |||||
Sbjct 533 TCAAAATAGCTAAATACAAAGCCGGGGTTGTCCCGGTTAAATTTAGACGTGTTCCTTGTG 592
Query 545 CAAAAA-CTGGTGGAGTCAAGTTTGAAACCAAAGGAAACCCTTATTTCTTAATGGTCTTG 603
| |||| | || || ||||||||||||| ||| ||||| ||| ||||||||||| ||||
Sbjct 593 CGAAAATC-GGAGGTGTCAAGTTTGAAATCAAGGGAAATCCTCATTTCTTAATGATCTTA 651
Query 604 CTATACAATGTAGGAGGAGCTGGAGATGTTAAGT-TCGTGCAAGTTAAAGGAAACAAG-A 661
| |||||||||||||||||||||| ||||| | | ||||| |||| |||| |||| |
Sbjct 652 CCGTACAATGTAGGAGGAGCTGGAGCTGTTAGGGCTA-TGCAAATTAAGGGAA-CAAGGA 709
Query 662 CCGGGTGGATAACAATGAAAAAGAACTGGGGGCAGAATTGGACCACTGATACAGTATTGA 721
|| |||||| | ||||| ||||| ||||| |||| ||||| ||||| | || ||||
Sbjct 710 CCCAGTGGATTGCGATGAAGAAGAATTGGGGACAGATTTGGAGCACTGGTGTTGTGTTGA 769
Query 722 CCGGCCAAGGTTTATCGTTTAGGGTTACGACGAGTGATGGGGTTACAAAAGATTTTATTA 781
|||| ||| |||||||||||||| |||| || |||||||| |||| ||||| ||||||
Sbjct 770 CCGGACAATGTTTATCGTTTAGGCTTACCACAAGTGATGGAGTTATGAAAGAGTTTATTG 829
Query 782 ATCTGATGCCAAAAAATTGGGGAT-T--TGGACAGACTTTTGTTGGAAAGATTAACTTTT 838
|| | | || | ||| || | |||||||| ||||| ||||||| |||| ||||
Sbjct 830 ATGTTACACCGCCGGACTGGAAATGTAATGGACAGAGTTTTGATGGAAAGGTTAATTTTT 889
Query 839 AG 840
||
Sbjct 890 AG 891
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 40940829805
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5