BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg330654
Length=1236
Score E
Sequences producing significant alignments: (Bits) Value
AT5G37970.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 1768 0.0
AT5G37990.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 1530 0.0
> AT5G37970.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr5:15123089-15124684
REVERSE LENGTH=1239
Length=1239
Score = 1768 bits (957), Expect = 0.0
Identities = 1151/1243 (93%), Gaps = 19/1243 (2%)
Strand=Plus/Plus
Query 1 ATGTTGAGTGCTTTTTGGGGTCATGCATCAGCTATTGCTATAGCTTCACCAGTGGCCAGC 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1 ATGTTGAGTGCCTTTTGGGGTCATGCATCAGCTATTGCTATAGCTTCACCAGTTGTCAGC 60
Query 61 ATTGTGGGTTTTCAAGGTGATCGTACTACCATAAGGCGACCAACATACGGAGAGATGAAA 120
|||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 61 ATTGTGGGTTTTCAGGGTGATCGTACTACGATAAGACGACCAACATACGGAGAGATGAAA 120
Query 121 TTTGTGGAAGTCGTTGAAAAACAAAGAGAAATGCCAACATTTCCTCAATCGTTTCCAATG 180
|||||||| || ||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct 121 TTTGTGGACGTAGTTGAAAGACCTAGAGAGATGCCAACATTTCCTCAATCGTTTCCAATG 180
Query 181 AACGGTGGTGATGGTCCGCACAGTTACCTCCACAATTCCTCTTATCAAAAAGTCGCGATA 240
||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||||
Sbjct 181 AACGGTGGTGATGGTCCGCACAGTTACATCCACAATTCTTCCTATCAAAAAGTGGCGATC 240
Query 241 GATGGCGCTAAAGAAAGGACAAGGGAAGCAATCTTAGAAAAACTCGATCTTGAACTCCTG 300
||||||| ||||||||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct 241 GATGGCGTTAAAGAAAGGACAAGCGAAGCGATCTTAGAAAAACTCGATCTTGAATTCCTC 300
Query 301 AACCATAACTCTGATGCAAATATCTTGAGAATTGCGGATTTTGGTTGTTCCATTGGACCT 360
|||| ||||||||| | ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 301 AACCGTAACTCTGAAGAAAATATCTTGAGAATTGTGGATTTTGGTTGTTCCATTGGACCT 360
Query 361 AACACGTTCGATGTTGTCCAAAATATCATAGATACGGTGAAACAAAAACATCT-aaa-aa 418
|||||||| |||||||||||||||||||| ||||| ||||||||||||| || ||| ||
Sbjct 361 AACACGTTTGATGTTGTCCAAAATATCATTGATACAGTGAAACAAAAACGCCTAAAAGAA 420
Query 419 aa-GAAACAC-ATATTGGTGCTCCTCTCGAGTTCCAAGTGTGCTTCAATGATCAACCCAA 476
|| |||| | |||||||||||||||| ||||||||||| ||||||||||||||||| ||
Sbjct 421 AACAAAAC-CTATATTGGTGCTCCTCTTGAGTTCCAAGTATGCTTCAATGATCAACCAAA 479
Query 477 CAATGATTTTAACACACTTTTTAGAACTCAACC-TCTCTTTT-CCAGACGAGAATACTTA 534
|||||||||||||||||||||| |||| ||||| | |||||| || || |||||| ||
Sbjct 480 CAATGATTTTAACACACTTTTTCGAACCCAACCGT-TCTTTTCCCGGA-AAGAATATTTT 537
Query 535 TCCGTCGGAGTTCCAGGCTCCTTCCATGGTAGAGTATTACCAAAAAATAGCCTCCATATC 594
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 538 TCCGTGGGAGTTCCAGGCTCCTTCCATGGTAGAGTATTACCAAAAAATAGCCTCCATATA 597
Query 595 GGTCACACTTCTTATACACTCCACTGGCTTTCTACA-GTTCCCAAACATGTTTGTGACAA 653
||||||||||| |||||||||||||||||||||| | |||||| ||||||||||||||||
Sbjct 598 GGTCACACTTCCTATACACTCCACTGGCTTTCTA-ATGTTCCCCAACATGTTTGTGACAA 656
Query 654 GAAATCTCCGGCATTGAATAAGAGCTATATTCAGTGTAATAATTTAGTTGATGAAGTGAC 713
||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||
Sbjct 657 GAAATCTCCGGCATTGAATAAAAGCTATATTCAATGTAATAATTTAGTAGATGAAGTGAC 716
Query 714 TAAGTCTTACAAGATCCAGTTCAAAAAAGACATAGGAGGTTTTCTTGAGGCAAGGGCGGA 773
||| |||||||||||||||||| |||||| | ||||| ||||||||||||||||||||
Sbjct 717 CAAGGCTTACAAGATCCAGTTCAGAAAAGATTTTGGAGGATTTCTTGAGGCAAGGGCGGA 776
Query 774 AGAGCTTGTCTCGGGCGGATTGATGATCCTATCAGGACAATGCTTGCCCGATGGTATCCC 833
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 777 AGAGCTTGTCTCGGGCGGATTGATGATCCTTTCAGGACAATGCTTGCCCGATGGTATCCC 836
Query 834 AAAGGCTTTGACATGGCAAGGTGTTGTGATCGATATGATTGGAGATTGTCTTATGGATCT 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 837 AAAGGCTTTGACATGGCAAGGTGTTGTGATCGATATGATTGGAGATTGTCTTATGGATCT 896
Query 894 GGCTAAATTGGGAATAACGAGCAAGGAAAAGATCGAACAT-TTCAGTTTGCCCACATATA 952
|||||||||||||||||| ||||||||||||||||||| | |||||||| |||||||| |
Sbjct 897 GGCTAAATTGGGAATAACAAGCAAGGAAAAGATCGAAC-TGTTCAGTTTACCCACATACA 955
Query 953 TCCCGCATATTAGTGAATTCAAGGCAAACATTGAGCAAAATGAAAACTTTAC-GATCGAG 1011
| |||||||||||||||||||||||||||||||| |||||||||||||||| | |||||
Sbjct 956 TTCCGCATATTAGTGAATTCAAGGCAAACATTGAACAAAATGAAAACTTTAATG-TCGAG 1014
Query 1012 ACAATGGAGGAGATAAGTCATCCTATGGATTATATGCCATTAACCAACGGCTTCATCACT 1071
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1015 ACAATGGAGGAGATAAGTCATCCTATGGATTATATGCCATTAACCAACGACTTCATCACT 1074
Query 1072 TCCATGTTTCGAGCCATTCTCAATACGATTATTGAAGAACACTTTGGAGACGGTGTGGTC 1131
|||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct 1075 TCCATGTTTCGAGCCATTCTCAATACAATTATCGAAGAACACTTTGGAGAAGGTGTGGTC 1134
Query 1132 AATGAACTATTC-GATCGACTTGCTAAGAAG-CTCGACAAGTACCCGATTAATTTCAGAA 1189
|| || |||||| | |||||||||||| ||| |||||||||||||| ||| |||||| ||
Sbjct 1135 AACGAGCTATTCAG-TCGACTTGCTAA-AAGGCTCGACAAGTACCCAATTGATTTCAAAA 1192
Query 1190 GGTGTAAAAAGTATGTGAACTATTTTATTGTGCTTAAAAGAAA 1232
|||||||||||||||||||||||||||| |||||||| |||||
Sbjct 1193 GGTGTAAAAAGTATGTGAACTATTTTATCGTGCTTAAGAGAAA 1235
> AT5G37990.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr5:15133737-15135500
REVERSE LENGTH=1400
Length=1400
Score = 1530 bits (828), Expect = 0.0
Identities = 1114/1247 (89%), Gaps = 40/1247 (3%)
Strand=Plus/Plus
Query 1 ATGTTGAGTG-CTTTTTGGGGTCATGCATCAGCTATTGCTATAGCTTCACCAGTGGCCAG 59
|||||||||| |||||| ||||||||| |||||||||||||||||||||||||| | |||
Sbjct 53 ATGTTGAGTGCCTTTTT-GGGTCATGCGTCAGCTATTGCTATAGCTTCACCAGTAGTCAG 111
Query 60 CATTGTGGGTTTTCAAGGTGATCGTACTACCATAAGGCGACCAACATACGGAGAGATGAA 119
|| | | | | || | | | | | ||||||| |||||| |||||||||||
Sbjct 112 CA-T-T--G---T---GG-G--C--A-T--C---AGGCGACAAACATATGGAGAGATGAA 150
Query 120 ATTTGTGGAAGTCGTTGAAAAACAAAGAGAAATGCCAACATTTCCTCAATCGTTTCCAAT 179
| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 151 ACACGTGGGGGTCGTTGAAAAACAAAGAGAAATGCCAACATTTCCTCAATCGTTTCCTAT 210
Query 180 GAACGGTGGTGATGGTCCGCACAGTTACCTCCACAATTCCTCTTATCAAAAAGTCGCGAT 239
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 211 GAACGGTGGTGATGGTCCGCACAGTTACATCCACAATTCCTCTTATCAAAAAGTAGCGAT 270
Query 240 AGATGGCGCTAAAGAAAGGACAAGGGAAGCAATCTTAGAAAAA-CTCGATCTTGAACTCC 298
||||||||||||||||| |||||| ||||| ||| || ||||| |||||||| ||||||
Sbjct 271 AGATGGCGCTAAAGAAAAGACAAGTGAAGCCATCCTA-AAAAACCTCGATCTCGAACTCT 329
Query 299 TGAACCATAACTCTGATGCAAATATCTTGAGAATTGCGGATTTTGGTTGTTCCATTGGAC 358
|||||| ||| ||||||| ||||||||| ||||||||||||||||||||||| |||||||
Sbjct 330 TGAACCGTAATTCTGATGAAAATATCTTAAGAATTGCGGATTTTGGTTGTTCTATTGGAC 389
Query 359 CTAACACGTTCGATGTTGTCCAAAATATCATAGATACGGTGAAACAAAAACATCT-aaa- 416
| ||||||||||| || ||||||||||| || ||||||||||| |||||| | || |||
Sbjct 390 CCAACACGTTCGAAGTAGTCCAAAATATTATCGATACGGTGAAGCAAAAAAACCTAAAAG 449
Query 417 aaaaGAA-ACAC-ATATTGGTGCTCCTCTCGAGTTCCAAGTGTGCTTCAATGATCAACCC 474
|||| || | | |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 450 AAAACAATGC-CTATATTGGTGCTCCTCTCGAGTTCCAAGTTTGCTTCAATGATCAACCA 508
Query 475 AACAATGATTTTAACACACTTTTTAGAACTCAACCTCTCTTTTCCAGACGAGAATACTTA 534
||||||||||||||||||||||||||||| |||||| ||| ||||| || || ||| |||
Sbjct 509 AACAATGATTTTAACACACTTTTTAGAACCCAACCTATCTCTTCCAAACAAGCATATTTA 568
Query 535 TCCGTCGGAGTTCCAGGCTCCTTCCATGGTAGAGTATTACCAAAAAATAGCCTCCATATC 594
|| || ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 569 TCGGTTGGAGTTCCAGGATCTTTCCATGGTAGAGTATTACCAAAAAATAGCCTCCATATC 628
Query 595 GGTCACACTT-CTTATACACTCCACTGGCTTTCTACAGTTCCCAAACATGTTTGTGACAA 653
||||||| || | ||| | |||||||||||||||||||||||| |||||||||| |||||
Sbjct 629 GGTCACA-TTACCTATGCGCTCCACTGGCTTTCTACAGTTCCCCAACATGTTTGCGACAA 687
Query 654 GAAATCTCCGGCATTGAATAAGAGCTATATTCAGTGTAATAATTTAGTTGATGAAGTGAC 713
||||||||||||||||||||| ||||| ||||| |||||||||||||| || ||||||||
Sbjct 688 GAAATCTCCGGCATTGAATAAAAGCTACATTCAATGTAATAATTTAGTAGAGGAAGTGAC 747
Query 714 T-AAGTCTTACAAGATCCAGTTCAAAAAAGACATAGGAGGTTTTCTTGAGGCAAGGGCGG 772
| ||| ||||| | ||||||| ||||| ||||| |||| |||||||| |||||| || |
Sbjct 748 TGAAG-CTTACCGGGTCCAGTTTAAAAAGGACATGGGAGATTTTCTTGGGGCAAGAGCTG 806
Query 773 AAGAGCTTGTCTCGGGCGGATTGATGATCCTATCAGGACAATGCTTGCCCGATGGTATCC 832
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 807 AAGAGCTTGTTTCGGGCGGATTGATGATCCTATCAGGACAATGCTTGCCCGATGGTGTCC 866
Query 833 CAAAGGCTTTGACATGGCAAGGTGTTGTGATCGATATGATTGGAGATTGTCTTATGGATC 892
| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 867 CTAAGGCTTTGACATGGCAAGGGGTTGTGATCGATATGATTGGAGATTGTCTTATGGATA 926
Query 893 TGGCTAAATTGGGAATAACGAGCAAGGAAAAGATCGAACAT-TTCAGTTTGCCCACATAT 951
|||||||| |||||| |||| ||||||||||||||||| | ||||||||||||| ||||
Sbjct 927 TGGCTAAACAGGGAATTACGACCAAGGAAAAGATCGAAC-TGTTCAGTTTGCCCATATAT 985
Query 952 ATCCCGCATATTAGTGAATTCAAGGCA-AACATTGAGCAAAATGAAAACTTTACG-ATCG 1009
|| |||||||||||||||||||||||| || || |||| |||||||||||||| | ||||
Sbjct 986 ATTCCGCATATTAGTGAATTCAAGGCAGAA-ATAGAGCGAAATGAAAACTTTA-GTATCG 1043
Query 1010 AGACAATGGAGGAGATAAGTCATCCTATGGATTATATGCCATTAACCAACGGCTTCATCA 1069
||||||||||| |||||||||||||||||||||||| |||| ||||||||| ||||||||
Sbjct 1044 AGACAATGGAGAAGATAAGTCATCCTATGGATTATAAGCCACTAACCAACGACTTCATCA 1103
Query 1070 CTTCCATGTTTCGAGCCATTCTCAATACGATTATTGAAGAACACTTTGGAGACGGTGTGG 1129
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1104 CTTCCATGTTTCGAGCCATTCTCAATACGATTATTGAAGAACACTTTGGAGATGGTGTGG 1163
Query 1130 TCAATGAACTATTCGATCGACTTGCTAAGAAGCTCGACAAGTACCCGATTAATTTCAGAA 1189
||||||| |||||||||||| |||||||||||||| |||||||||| ||| |||||| ||
Sbjct 1164 TCAATGAGCTATTCGATCGATTTGCTAAGAAGCTCAACAAGTACCCAATTGATTTCAAAA 1223
Query 1190 GGTGTAAAAAGTATGTGAACTATTTTATTGTGCTTAAAAGAAAATAA 1236
||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1224 GGTGTAAAAAGTATGTGAATTATTTTATCGTGCTTAAAAGAAAATAA 1270
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 60742659450
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5