BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg330673

Length=294
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G47630.1 | Symbols: mtACP3 | mitochondrial acyl carrier prot...   462    7e-130


> AT5G47630.1 | Symbols: mtACP3 | mitochondrial acyl carrier protein 
3 | chr5:19306147-19307094 FORWARD LENGTH=640
Length=640

 Score =  462 bits (250),  Expect = 7e-130
 Identities = 278/291 (96%), Gaps = 3/291 (1%)
 Strand=Plus/Plus

Query  4    AATTTCACATCAGAAGCAGCAGATGCAGATGGAGGCCAAGATCAAATCTTGAGCAGGGTT  63
            ||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||
Sbjct  144  AATTTCACATCAGAAGCAGC---TGCAGATGGAGGCCAAGATCAAATATTGAGCAGGGTT  200

Query  64   ATTGAACTGGTGAAGAAATACGACAAAACCAACACCTCTAAGGTTACTGAAAGGGCTGAT  123
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct  201  ATTGAACTGGTGAAGAAATACGACAAAACCAACACCTCTGAGGTTACTGAAAGGGCTGAT  260

Query  124  TTTCAGAAGGATTTGTCGCTGGACAGCTTAGACAAGGTGGAGCTAGTCATGGCTATTGAA  183
            |||||||| ||||||||| |||||||||| ||||||  ||||||||| ||||||||||||
Sbjct  261  TTTCAGAAAGATTTGTCGTTGGACAGCTTGGACAAGACGGAGCTAGTTATGGCTATTGAA  320

Query  184  GAAGAGTTCTCGATTGAGATCCCTGATGAGAAAGCAGATAAGCTTACTTGTTGTGGTGAT  243
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct  321  GAAGAGTTCTCGATTGAGATCCCTGATGAGAAAGCTGATAAGCTTACTTGTTGTGGTGAT  380

Query  244  GTTGCAACTTACATACTCTCTGAAACTCCTACCAAAGCGTCTGAGTCCTGA  294
            |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct  381  GTTGCAACATACATACTCTCTGAAACTCCTACCAAAGCGTCTGAGTCCTGA  431



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 13572292230


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5