BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg330904
Length=3471
Score E
Sequences producing significant alignments: (Bits) Value
AT5G44870.1 | Symbols: LAZ5 | Disease resistance protein (TIR-N... 3790 0.0
> AT5G44870.1 | Symbols: LAZ5 | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18114666-18118608 FORWARD LENGTH=3513
Length=3513
Score = 3790 bits (2052), Expect = 0.0
Identities = 3039/3498 (87%), Gaps = 138/3498 (4%)
Strand=Plus/Plus
Query 22 TCTTCCGAAATACTTCCC-AAGTCGTGGCAAGTGTTCATCAATTTCAGGGGAGCAGAATT 80
||||||||||||| |||| |||||||||||||||||||||||||| | |||||||| ||
Sbjct 10 TCTTCCGAAATAC-TCCCGGAGTCGTGGCAAGTGTTCATCAATTTCCGAGGAGCAGATTT 68
Query 81 GCGCAATAGTTTCATTAGCCATCTGGAGGGAGCCTTAG-CGCT-AGCCGGGATCAAATAC 138
|||||| ||||||| |||||||||| ||||| ||| | | || ||| || |||| ||||
Sbjct 69 GCGCAACGGTTTCATCAGCCATCTGGCGGGAG-CTTTGAC-CTCAGCTGGAATCACATAC 126
Query 139 TATATCGACACGAAAGAGGTCCCGAGCGAAGATCTTAGTGTCCTTTTCGAGAGGATCGAG 198
|| ||||||||| |||| ||||||||||||||||| | |||||||||| ||||||| |||
Sbjct 127 TACATCGACACGGAAGAAGTCCCGAGCGAAGATCTCACTGTCCTTTTCAAGAGGATAGAG 186
Query 199 CAATCTGAAATTGCACTGTCCATCTTCTCGAGCAAGTACGCTGAATCAAACTGGTGTTTG 258
|||| ||||| ||||||||||||||||||||||| || ||||| ||||| |||||||||
Sbjct 187 GAATCGGAAATCGCACTGTCCATCTTCTCGAGCAATTATGCTGAGTCAAAATGGTGTTTG 246
Query 259 GACGAGCTGGTGAAAATCATGGAACAAGTCAAGAAAGAAAAACTCCGAATCAT-CCCAGT 317
|||||||| ||||| |||||||||||||| ||||||| ||| ||| ||||||| ||| ||
Sbjct 247 GACGAGCTCGTGAAGATCATGGAACAAGTAAAGAAAGGAAAGCTCAGAATCATGCCC-GT 305
Query 318 CTTCTTTAACGTGAAGCCTGAGGAGGTTAGAGAGCAGAAAGGAGAGTTCGGACTTAAGCT 377
|||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||
Sbjct 306 CTTCTTCAACGTGAAGCCAGAGGAGGTGAGAGAGCAGAACGGAGAGTTCGGACTTAAGCT 365
Query 378 ATACGGAGAAGGTAAAAGGAAACGACCCAATATACCTAATTGGGAAAACGCTCTGCAGTC 437
||||||||||||||||| ||||||||||| |||||||||||||| |||||| ||| |||
Sbjct 366 TTACGGAGAAGGTAAAAGCAAACGACCCAACATACCTAATTGGGAGAACGCTTTGCGGTC 425
Query 438 TGTTCCAAGCAAGATAGGCTTGAATTTGTCGAATTATAGGAACGAGAGGGAGCTCGTTGA 497
||| |||||||||||||||||||||||| |||||| ||| ||||||| ||| ||| ||||
Sbjct 426 TGTCCCAAGCAAGATAGGCTTGAATTTGGCGAATTTTAGAAACGAGAAGGAACTCCTTGA 485
Query 498 AAAGAT-AGTTGACTCGATCAAAAGAGTGCTTGCCCTAATTCCACTG-GGAAGCAGAGTA 555
||||| | ||||||| ||||||| ||| ||||||| |||| ||| | | ||||||||||
Sbjct 486 CAAGATCA-TTGACTCCATCAAAAAAGTACTTGCCCGAATTACAC-GAGCAAGCAGAGTA 543
Query 556 ACAGAGTATCTGAACGGGATCTCAAAAGCCTCAGGGGCAAAGAATGTAGACAGATTTTCG 615
|||| | ||| |||||||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct 544 GCAGAATCTCTAAACGGGATCTCAAAAGACTCAGAGGCAAAGAATGTAGACACATTTTCG 603
Query 616 CTAAGCTCCTA-TGAGTTTCAATGTTCCTCCCTTGATATATCAGTCACCAACGATGACAA 674
| || |||| | ||| |||| || | | ||| ||| | | | | | || | | |
Sbjct 604 CCAAACTCC-AGTGATTTTCCATCTACTTCCATTG----A-C-G--A-CGAC-CT--C-A 649
Query 675 TGGAATC-ACTCCGTTTCAGTGCCCAGCCACGATT-GACGAGTTATGCAAGGTAGGAGTA 732
| ||| ||| || ||||| || |||||| ||| | | | || ||| | | ||
Sbjct 650 --GTATCAACT-CGCCTCAGTACCAAGCCACAATTCCCCCCG-CAAGC-AGGGAAG-GT- 702
Query 733 GAACATCTCAATGA-GATCTCTACTGTAAGTTCAACTGGTAATAGTTCATCTAGAAACAT 791
|||| |||||| | |||||||||||||||||||||||| ||| | || | | |||||
Sbjct 703 GAACGTCTCAA-CACGATCTCTACTGTAAGTTCAACTGG---TAG-T-AT-T-G-AACAT 753
Query 792 CGAACAGCCGCCACCCCACTACGGAATAGAACCACGCCTTAAGGA-ACTGGAAGAAAAGA 850
|| |||||| |||||||||||||||||||||||||||| | |||||||||||
Sbjct 754 -------CCTCCACCCAACTACGGAATAGAACCACGCCTTAAGGAGA-TGGAAGAAAAGT 805
Query 851 TACAATTTGATTGCATCGAAACTAAAATTGTTGGAATTGTTGGGATGCCTGGAATTGGTA 910
|| | |||||| || |||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 806 TAGATTTTGATAGCCTCGAAACTAAAACTGTTGGAATTGTTGGGATGCCTGGGATTGGTA 865
Query 911 AAACCACTCTTGCGGAAACATTGTATAGAAAGTGGAAACACAGGTTTAAGAGGAGCAAGT 970
||||||||||||| ||||| ||||||||||||||| |||||| |||| ||||||| | ||
Sbjct 866 AAACCACTCTTGCAGAAACGTTGTATAGAAAGTGGGAACACAAGTTTGAGAGGAGTATGT 925
Query 971 TTATCCCAAATGTCAGT-A-A-GGAGAGT-CA-AC-G-A-G-GAT---TGCAAAAGAGAT 1018
|| ||||| ||| |||| | | || || | | || | | | | | |||| |||||||
Sbjct 926 TTTTCCCAGATGCCAGTAAGATGGCGAATGAACACGGAATGTGTTGGCTGCAGAAGAGAT 985
Query 1019 TGTTGGTAGAGCTGTTGATGGATATTCAT-TACAAGACAGGATATTCAGA-GAATGAACA 1076
| |||| ||||||||||| ||||| | || | ||| | ||||||| || | |||||||||
Sbjct 986 TATTGGAAGAGCTGTTGAAGGATACTAATCT-CAACATAGGATATACA-ACGAATGAACA 1043
Query 1077 TGAGTTTTGTAAGGATGCTCTTCTCCAAAAGAAAGTTTTTGTTGTTATAGATGATGTTAG 1136
||||||||||||||||| |||||||| ||||||||||||| |||| |||||| |||||||
Sbjct 1044 TGAGTTTTGTAAGGATGTTCTTCTCCTAAAGAAAGTTTTTCTTGTCATAGATAATGTTAG 1103
Query 1137 TAGCAAGGAACAGATCAAAACTCTTTTTGGTCAATGGGATTGGATCAAAAAAGGTAGCAA 1196
|||| ||||||||||| |||||||||||||| ||||| ||||||| ||||| || |||||
Sbjct 1104 TAGCGAGGAACAGATCGAAACTCTTTTTGGTAAATGGAATTGGATTAAAAATGGAAGCAA 1163
Query 1197 GATTGTTATTACATCAAGTGATGAGTCACTGCTCAAGGAACTGGTTGACGATACTTATGT 1256
|||||||||||| ||||||||||||||| ||||||||| | ||| | |||||||||||
Sbjct 1164 GATTGTTATTACGTCAAGTGATGAGTCAATGCTCAAGGGTTTCGTTAAAGATACTTATGT 1223
Query 1257 AGTCCCGAGGTTGAACAGCACAGGA-AGTTTACTGTGGTTTACCAATCACGCCTTTGGTT 1315
|||||| || |||||||||| | || ||| ||||||||||||| ||||| || |||||||
Sbjct 1224 AGTCCCAAGTTTGAACAGCAGA-GACAGTCTACTGTGGTTTACTAATCATGCATTTGGTT 1282
Query 1316 TGGATCATGCCGAAGGAAATTTCGTAAAGCTGTCCAGACACTTTCTGAATTATGCCAAAG 1375
||||| ||||| | ||||| || |||||| |||||| |||||||||||||||||||||||
Sbjct 1283 TGGATGATGCCCAGGGAAACTTGGTAAAGTTGTCCAAACACTTTCTGAATTATGCCAAAG 1342
Query 1376 GAAACCCACTAGTCCTCAGAGCTTTTGGTGTAGAACTTCGTGGGAAAGACAAGGCTTATT 1435
| |||||||||| |||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1343 GCAACCCACTAGCCCTCGGAGCTTTTGGTGTAGAACTTTGTGGGAAAGACAAGGCTGATT 1402
Query 1436 GGGAACAGAGAATTAAAACATTGAAACTAATTTCCAATAAGATGATCCAAGATGTCTTGA 1495
||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1403 GGGAAAAGAGAATAAAAACATTGACACTAATTTCCAATAAGATGATCCAAGATGTCTTGA 1462
Query 1496 GAAGAAGGTATGATGAACTCACAGAGAGGCAGAAAGATATTTTTCTTGACATTGCATGTT 1555
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1463 GAAGAAGGTATGATGAACTCACAGAGAGGCAGAAAGATATTTTTCTTGACGTCGCATGTT 1522
Query 1556 TCTTCGAATCAGAGAATGCAAGTTATGTAAGGTGCCTGGTAAATTCAAGT-A---T---T 1608
||||| |||||||||||| |||||||||| | | |||| |||||| || | | |
Sbjct 1523 TCTTCAAATCAGAGAATGAAAGTTATGTACGACACGTGGTGAATTCATGTGATTCTGAGT 1582
Query 1609 C--C---------GGATGAAATAAGAGATCTCCAA-GACAAGTTTCTCGTCAATATTTCT 1656
| | ||||||||||| ||||||| || || |||||||| ||||||||||||
Sbjct 1583 CTACTAAGAGTTGGGATGAAATAACAGATCTCAAAGGA-AAGTTTCTTGTCAATATTTCT 1641
Query 1657 TGTGGTCGATTTGAGATGCATGATATATTATGCACATTCGCCAAGGAACTTGCTTCACAA 1716
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1642 GGTGGTCGAGTTGAGATGCATGATATACTATGCACATTCGCCAAGGAACTTGCTTCACAA 1701
Query 1717 GCATTGACTGAAG-TCACAAGGGTTCATCTCAGGCTGTGGAAATATCAAGATATCATTTG 1775
||||||||||||| | |||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 1702 GCATTGACTGAAGAT-ACAAGGGTTCATCTCAGGCTGTGGAACTATCAAGATATCATGTG 1760
Query 1776 GTTGCTCAACAATAAATTGGAAATGGAAAATGTGAGAGGTATTTTCTTAGACATGTCTGA 1835
||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 1761 GTTTCTCAACAATGAATTGGAAATGGAAAATGTCAGAGGTATTTTCTTAGACATGTCTAA 1820
Query 1836 AGTTCCGGAGGAAATGATATTTGATGCTAAAATCTTT--C-GTATGTGCAATATTCGATA 1892
||||||||||||||||| |||||||| ||| |||||| | |||||||||| |||||||
Sbjct 1821 AGTTCCGGAGGAAATGACATTTGATGGTAACATCTTTAGCAATATGTGCAATCTTCGATA 1880
Query 1893 TCTCAAAATATACAATTCTGTCTACCCTAAGGAAGGCGAAGGTATCTTCAAATTTGACAG 1952
|||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||
Sbjct 1881 TCTCAAAATATACAGTTCTGTTTGCCATAAGGAAGGCGAAGGTATCTTCAAATTTGACAC 1940
Query 1953 ATTTAGGG-AGTTCCAGTTACCATTAAATAAGGTAAGCTATCTCCACTGGATAAAATATC 2011
| |||||| | || |||||||||||| | |||||| |||||||||||||||| |||||||
Sbjct 1941 AGTTAGGGAAATT-CAGTTACCATTAGACAAGGTACGCTATCTCCACTGGATGAAATATC 1999
Query 2012 CATTGGATAAACTTCCATCAGACTTCAACCCGGAGAATCTTGTTAATCTTGAACTGCCTT 2071
||| ||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 2000 CATGGGAGAAACTTCCATCAGACTTCAACCCGGAGAATCTCGTTGATCTTGAACTGCCTT 2059
Query 2072 ATAGCTCCATTAAGCAAGTTTGGGAGGGTGTTAAGGAAACCCCAAAACTAAAGTGGGCCA 2131
|||||||||||||| |||||||||||||||||||||| ||||| | ||||||||||||||
Sbjct 2060 ATAGCTCCATTAAGAAAGTTTGGGAGGGTGTTAAGGATACCCCGATACTAAAGTGGGCCA 2119
Query 2132 ATCTCAGCTATTCAAGTAAGTTGACTAACCTTTTAGGGTTGTCAAATGCTAAAAATCTTG 2191
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2120 ATCTAAGCTATTCAAGTAAGTTGACTAACCTTTTAGGGTTGTCAAATGCTAAAAATCTTG 2179
Query 2192 AAAGATTGAATCTTGAAGGTTGCACAAGTTTGCTTAAACTGCCCAAAGAGATGGAGAACA 2251
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2180 AAAGATTGAATCTTGAAGGTTGCACAAGTTTGCTTAAACTGCCCCAAGAGATGGAGAACA 2239
Query 2252 TGGAAAGTCTTGTGTTTCTCAACATGAGAGGTTGCAAGAGTCTCACATTTCTTCATAGGA 2311
|| |||||||||| || || ||||||||| |||||| |||||||||| |||||| || |
Sbjct 2240 TGAAAAGTCTTGTCTTCCTGAACATGAGACGTTGCACTAGTCTCACATGTCTTCAAAGTA 2299
Query 2312 TGAATTTGAGCTCTCT-AACAATCCTCATACTCAGTGACTGCTCAAAACTTGAGGAATTT 2370
| || |||||||||| || ||| ||||||||||||||||||||||||||||||||||||
Sbjct 2300 TTAAAGTGAGCTCTCTGAA-AATTCTCATACTCAGTGACTGCTCAAAACTTGAGGAATTT 2358
Query 2371 GAGGTGATTTCGGAAAATCTGGAAGCGTTATATTTAGATGGAACTGCAATAAAGGGACTT 2430
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2359 GAGGTGATTTCGGAAAATCTGGAAGAATTATATTTAGATGGAACTGCAATAAAGGGACTT 2418
Query 2431 CCTCCAACCGTCCGGG-ATCTGAAGAGACTTGCCATATTGAATATGAAAGGTTGTACAGA 2489
|||||| | | ||||| |||||| |||||||| | | || |||||| |||| ||||||||
Sbjct 2419 CCTCCAGCGG-CCGGGGATCTGACGAGACTTGTCGTCTTAAATATGGAAGGCTGTACAGA 2477
Query 2490 ACTGGAGAGTCTTCCTGAATGTCTTGGAAAACAAAAAGCTCTTGAAGAACTCATACTCTC 2549
||||||||||||||| || ||||||||||||| ||||||||| ||||||| |||||||
Sbjct 2478 ACTGGAGAGTCTTCCCAAACGTCTTGGAAAACAGAAAGCTCTTCAAGAACTGGTACTCTC 2537
Query 2550 TA-ATTGTTCAAAGCTTGAGAGTGTTCCAAAGG-CTGTaaaaaacatgaaaaaaT-TACG 2606
| || |||||||||| ||||| ||||||| || | |||||| |||||||| | | ||||
Sbjct 2538 TGGAT-GTTCAAAGCTCGAGAGCGTTCCAACGGAC-GTAAAAGACATGAAACA-TCTACG 2594
Query 2607 GATCTTATTGCTTGATGGCACAAGAATCA-AAGATATCCCGAAGATAAACTCGCTAGAGC 2665
| ||||||||||||| ||||||||||||| || | |||||||||||||| |||||| ||
Sbjct 2595 GCTCTTATTGCTTGACGGCACAAGAATCAGAA-AGATCCCGAAGATAAAGTCGCTAAAGT 2653
Query 2666 GTTTGTCCTTAAGTAGAAATATTGCAATGATCCATCTGCAAGATAGTCTCAGTGGGTTCT 2725
|||||| |||||||||||||||||||||| || |||| ||||||| ||||| | ||||
Sbjct 2654 GTTTGTGCTTAAGTAGAAATATTGCAATGGTCAATCTACAAGATAATCTCAAAGATTTCT 2713
Query 2726 CTAACCTGAAATGTGTTGTCATGAAGAACTGCGAGAATCTCAGATATCTTCCATCGCTTC 2785
|||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2714 CTAATCTGAAATGTCTTGTCATGAAGAACTGCGAGAATCTCAGATATCTTCCTTCGCTTC 2773
Query 2786 CACGATCTCTTGAGTATCTAAACGTATATGGTTGTGAAAGACTAGAAACAGTTGAGAATC 2845
|| || ||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2774 CAAAATGTCTTGAGTACCTAAACGTATATGGTTGTGAAAGACTAGAATCAGTTGAGAATC 2833
Query 2846 CACTGGTCTT-TCG-TGGGTT--CTTTAATG-TA-ATTCAGCTTGAGAAGATC-CGTTCC 2898
||||||| | | | | |||| | ||| | | || | || ||| | || ||||||
Sbjct 2834 CACTGGT-TGCT-GATAGGTTAACGTTATTCCTTGATAGATCT-GAGGA-ATTACGTTCC 2889
Query 2899 ACTTTCTTGTTCACTAATTGCAACAATCTGTTTCAAGATGCAAAGGAGTCAATCTCATCC 2958
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||
Sbjct 2890 ACTTTCTTGTTCACTAATTGCCACAATCTGTTTCAAGATGCAAAGGACTCAATCTCAACC 2949
Query 2959 TACGCAAAATGGAAATGCCACAGACTTGCACTTGACTGCTACCAATTGGGCATAGTTTCA 3018
||||| ||||||||||||||| |||||||| |||| |||||| || || |||||||||
Sbjct 2950 TACGCGAAATGGAAATGCCACCGACTTGCAGTTGAATGCTACGAACAGGACATAGTTTCT 3009
Query 3019 GGAGCTTTTTTCAACACTTGCTATCCTGGATTTATAGTCCCTTCGTGGTTCCA-CTACCA 3077
||||||||||||||||||||||||||||||| ||||||||||||||||||| | | ||||
Sbjct 3010 GGAGCTTTTTTCAACACTTGCTATCCTGGATATATAGTCCCTTCGTGGTTCGATC-ACCA 3068
Query 3078 AGCAGTTGGATCAGTCTTTGAGCCAAGGCTGAAATCACATTGGTGTAACAATATGCTTTA 3137
|||||||||||||||||| |||||||||||| || ||||||||| ||||| ||||||||
Sbjct 3069 AGCAGTTGGATCAGTCTTAGAGCCAAGGCTGGAACCACATTGGTATAACACTATGCTTT- 3127
Query 3138 C-GGGATAGCTCTATGTGCAGTTGTCTCATTCCATGAGAACCAAGATCCGATCATCGACA 3196
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 3128 CTGGGATAGCTCTATGTGCAGTTGTATCATTCCATGAGAACCAAGATCCGATCATCGGCA 3187
Query 3197 GTTTCTCAGTAAAATGCACACTGCAGTTTGAAAACGAAGACGGGTCTCGTATCCGATTTG 3256
|||||||||||||||||||| |||| |||||||||||||| ||||||| | || | ||||
Sbjct 3188 GTTTCTCAGTAAAATGCACATTGCAATTTGAAAACGAAGATGGGTCTC-T-TC-GCTTTG 3244
Query 3257 ATTGTGATATCGGAAGTTTGA-CAAAACCAGGAA-GAATTGGGGCAGACCATGTTTTTAT 3314
|||||||||||||| |||||| | || ||||||| || ||| ||||||||||||||||||
Sbjct 3245 ATTGTGATATCGGATGTTTGAACGAA-CCAGGAATGA-TTGAGGCAGACCATGTTTTTAT 3302
Query 3315 CGGCTATGTCCCTTGCTCACGTTTGAAAGATTACTACTCTATACCTATTTATCACCCTAC 3374
|||||||||| |||||||||||||||||||| || |||||||||||||| ||||||||||
Sbjct 3303 CGGCTATGTCACTTGCTCACGTTTGAAAGATCACCACTCTATACCTATTCATCACCCTAC 3362
Query 3375 ATA-TGTAAAAGTGGAGTTCTACTTGCCTGATGGCT-GTAAAAGTGAAGTGGTGGATTGT 3432
| | ||||||| || ||||| ||||| |||||| || |||||||| ||||||||||||||
Sbjct 3363 A-ACTGTAAAAATGCAGTTCCACTTGACTGATG-CTTGTAAAAGTAAAGTGGTGGATTGT 3420
Query 3433 GGGTTCCGTTTGATGTAC 3450
||||||||||||||||||
Sbjct 3421 GGGTTCCGTTTGATGTAC 3438
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 172774951692
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5