BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg330958
Length=1626
Score E
Sequences producing significant alignments: (Bits) Value
AT5G44390.1 | Symbols: | FAD-binding Berberine family protein ... 2231 0.0
AT5G44380.1 | Symbols: | FAD-binding Berberine family protein ... 1393 0.0
AT5G44400.1 | Symbols: | FAD-binding Berberine family protein ... 1020 0.0
> AT5G44390.1 | Symbols: | FAD-binding Berberine family protein
| chr5:17882196-17885004 REVERSE LENGTH=1860
Length=1860
Score = 2231 bits (1208), Expect = 0.0
Identities = 1493/1630 (92%), Gaps = 21/1630 (1%)
Strand=Plus/Plus
Query 9 TTCAAAACCACGCCCTATAATTTCTTGTATATC-GTTTTTAGCCCTATATATTTCTTTCG 67
||||||||||| ||||| |||||||||||| || |||||| || |||||| |||| |||
Sbjct 107 TTCAAAACCACTCCCTACAATTTCTTGTATTTCAGTTTTT-GCTCTATATTTTTCATTC- 164
Query 68 T-TACAATAACACCAGCTTCTTCAACCTCTCTACAAGATGATTTCATCAAATGTCTCCAC 126
| |||||||||| | ||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 165 TACACAATAACACTAACTTCTTCAACCTCCCTACAAGATGATTTCATCAAATGTCTTTAC 224
Query 127 AAAAACACAAATGTCCGTTTTCCACTCGACAAAACGTTCTTCACTCCTGAAAGAAACTCT 186
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 225 CGAAACACAAATGTCCGTTTTACACTCGACAAAACGTTCTTCACTCCTGAAAGAAACGCT 284
Query 187 TCGATCTTCACCGAAG-TCTTTGAATCGACGGCTCAAAATCAACGGTTAC-TGACCAAGG 244
|| |||||||| |||| || |||||||||||||||| |||||| | ||| ||||||||
Sbjct 285 TCCATCTTCACAGAAGTTC-TTGAATCGACGGCTCAGAATCAA-AGATACTTGACCAAGA 342
Query 245 CAATGCCTAAACCGGGATTCATATTTAGGCCGATTCATGAGTCTCATGTTCAAGCTTCTG 304
|||||||||||||||| |||||||||| ||| |||| || ||||| || |||||||| |
Sbjct 343 CAATGCCTAAACCGGGTTTCATATTTAAACCGGTTCACGAATCTCACGTCCAAGCTTCCG 402
Query 305 TCATCTGTTCGAAGAAACTTGGA-ATACATTTTCGTGTTAGAAGCGGCGGTCACGATTAC 363
|||||||||| ||||||||| || |||||||||||||| |||||||||||||| ||||||
Sbjct 403 TCATCTGTTCCAAGAAACTT-GAGATACATTTTCGTGTCAGAAGCGGCGGTCATGATTAC 461
Query 364 GAGGGCGTGTCTTATGTTTCACGGATCGAAAACCCGTTTGTATTAATCGATTTGTCGAAA 423
|||||||||||||||||||||| ||||||||| || |||||||| |||||||||||||||
Sbjct 462 GAGGGCGTGTCTTATGTTTCACAGATCGAAAAACCTTTTGTATTGATCGATTTGTCGAAA 521
Query 424 TTGAGACAAATCAATATTGATATTGAA-GACAATAGTGCTTGGGTTCAAGCTGGTGCTAC 482
|||||||| |||||| |||||||| || |||| |||||||||||| |||||||||||||
Sbjct 522 TTGAGACAGATCAATGTTGATATT-AAGGACACCAGTGCTTGGGTTGAAGCTGGTGCTAC 580
Query 483 TATTGGTGAGCTTTACTACAGAATTGCAGAAAAGAGCAAGATTCATGGATTCCCTGCAGG 542
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 581 CGTTGGTGAGCTTTACTACAGAATTGCAGAGAAGAGCAAGTTTCATGGATTCCCTGCAGG 640
Query 543 TGTGTACCCGAGTTTAGGCATAGGTGGGCATATAACAGGCGGTGCATACGGTTCCTTGAT 602
||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 641 TGTTTACCCGAGCTTAGGCATCGGTGGGCATATAACAGGCGGTGCATACGGTTCCTTGAT 700
Query 603 GAGGAAGTATGGTCTTGCTGCAGATAATGTTCTAGACGCAAAGATCGTTGATGCTAATGG 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 701 GAGGAAGTATGGTCTTGCTGCAGATAATGTTCTAGACGCAAAGATCGTTGATGCTAACGG 760
Query 663 TAAATTACTCGACAGAGCCGCGATGGGTGAGGATCTATTTTGGGCGATTAGAGGCGGTAG 722
|||||||||||| |||||| ||||||| |||||||| |||||||| |||||||| || ||
Sbjct 761 TAAATTACTCGATAGAGCCTCGATGGGCGAGGATCTGTTTTGGGCAATTAGAGGAGGCAG 820
Query 723 TGGAGGGAGTTTTGGGATAATTTTATCATGGAAGATCAAGCTTGTTCCTGTTCCTGAAAC 782
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 821 TGGAGGGAGTTTTGGGATAATTTTGTCATGGAAAATCAAGCTTGTTCCTGTTCCTGAAAC 880
Query 783 CATAACCGTCTTCACGGTCACCAAGACATT-GAAGCAAGAT-GCAAGTTTCAAGATTCTT 840
| |||||||||||||||||||||| ||||| || ||||||| | ||||||||||||||||
Sbjct 881 CCTAACCGTCTTCACGGTCACCAAAACATTCGA-GCAAGATAG-AAGTTTCAAGATTCTT 938
Query 841 TTTAAGTGGCAACAAGTTGCGGACAAGCTTGTTGAAGAGCTCTTCTTACGAGTGTTCTTC 900
| ||||||||| || |||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 939 TCAAAGTGGCAAGAAATTGCGGACAATCTTGTTGATGAGCTCTTCTTACGAGTGTTCTTC 998
Query 901 ACTGTAGT-TGGAAACAAAGCAAACAAGACAGTTTCGATGGCCTACATAGGTCAGTTTCT 959
|||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 999 ACTGTA-TCTGGAAACAAAGCAAACAAGACAGTGACGATGGCCTACATAGGTCAGTTTCT 1057
Query 960 TGGCGAGAAAGAAACCTTGATGGAGGTAATGGAGAAGGATTTTCCAGAACTAGGGCTAAC 1019
||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 1058 TGGCGAGAAAGGCACCTTGATGGAGGTAATGAAGAAGGATTTTCCAGAACTTGGGCTAAC 1117
Query 1020 GCAGAAGGATTGTATAGAAATGAACTGGATCAAATCCATTATTTACAGCTCTGGATTCCC 1079
|||||||||||||||||||||| |||||| | ||||||||||||| ||||||||||||
Sbjct 1118 TCAGAAGGATTGTATAGAAATGAGTTGGATCGATTCCATTATTTACAACTCTGGATTCCC 1177
Query 1080 AACAAGCTCTCCTCCTCCCATTGAGATTTTGCTTCAAGCAAAGTCTCCACTTGGAAAAGT 1139
||||| | |||||||||| ||||||||| |||||||||||||||||||| | ||||||||
Sbjct 1178 AACAAACCCTCCTCCTCCTATTGAGATTCTGCTTCAAGCAAAGTCTCCAATCGGAAAAGT 1237
Query 1140 TTACTTTAAAGCGAAATCGGATTTCGCTAAAGAACTTATTCCTGTTTTAGGGCTCAAAGG 1199
|||||| |||| ||||||||||||||||||| ||| ||||||||||||||||||| ||||
Sbjct 1238 TTACTTCAAAGGGAAATCGGATTTCGCTAAAAAACCTATTCCTGTTTTAGGGCTCGAAGG 1297
Query 1200 GATGCTCAAGAAGTTGCTTGAAGAAGACGCAGCATTAGTGATTTGGACTCCTTACGGTGG 1259
|||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1298 GATGTTCAAGAAGTTGCTTGAAGAAGACGCAGCGTTAGTAATTTGGACTCCTTACGGTGG 1357
Query 1260 AAAGATGAATAAAATCCCTGAATCCGAGATCCCGTTTCCGCATAGAAACGGAACCAACTT 1319
||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1358 AAAGATGGATAAAATCCCTGAATCTGAGATCCCATTTCCGCATAGAAACGGAACCAACTT 1417
Query 1320 CATGATTCAATACTACAGGAGCTGGTCAGATAGCGAGGAAT--CGAA-CAAACGCATCAA 1376
|||||||||||| |||||||||||||||||||| ||| || | || || ||||| |||
Sbjct 1418 CATGATTCAATATTACAGGAGCTGGTCAGATAGTGAGAAAAGACCAAACAGACGCACCAA 1477
Query 1377 ATGGATCAGAGAGTTGTACAGTTACATGACGCCTTACGTTTCAAGCAATCCAAGACAAGC 1436
||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||
Sbjct 1478 ATGGATCAGAGAGTTGTACGGATACATGACGCCTTACGTCTCAAGCAATCCAAGACAAGC 1537
Query 1437 ATATGTGAACTACAGAGATCTAGACCTGGGACAGAACAAGAACAACTCAAAGTCTAACTT 1496
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1538 ATATGTGAACTACAGAGATCTAGACCTGGGACAGAACAAGGACAACTCAAAGTCTAACTT 1597
Query 1497 CATAGAAGCTAAAAGATGGGGAGCTAAGTACTTCAAAGACAATTTCAAAAGATTGGTAAG 1556
|||||||||||||| |||||||||||| || ||||||||||||||||| |||||||| ||
Sbjct 1598 CATAGAAGCTAAAATATGGGGAGCTAATTATTTCAAAGACAATTTCAACAGATTGGTGAG 1657
Query 1557 GATTAAAACAAAGGTTGATCCAGATAACTTCTTTAGACACGAGCAGAGTATCCCAACTCT 1616
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1658 GATTAAATCAAAGGTTGATCCAGATAACTTCTTCAGACACGAGCAGAGTATCCCAACTCT 1717
Query 1617 GCCCGTTTGA 1626
|||||| |||
Sbjct 1718 GCCCGTATGA 1727
> AT5G44380.1 | Symbols: | FAD-binding Berberine family protein
| chr5:17878722-17881440 REVERSE LENGTH=1848
Length=1848
Score = 1393 bits (754), Expect = 0.0
Identities = 1361/1647 (83%), Gaps = 70/1647 (4%)
Strand=Plus/Plus
Query 9 TTCAAAACCACGCCCTATAATTTCTTGTA-TATCGTTTTTAGCCCTATATATTTCTTTC- 66
||||||||||| ||||| ||||||||||| ||| | ||| || | | ||| |||| |||
Sbjct 80 TTCAAAACCACTCCCTACAATTTCTTGTATTATAG-TTTCAGTCTTGTATTTTTCATTCT 138
Query 67 GTTACAATAACACCAGCTTCTTCA--A-CCTCTC-TACAAGATGATTTCATCAAA-TGTC 121
|| | ||||||||| |||||||| | |||| | | |||||| | ||||| ||| |||
Sbjct 139 ATTGC-ATAACACCAACTTCTTCATCAGCCTC-CATCCAAGATCAATTCAT-AAACTGTG 195
Query 122 TCCACAA-AAACACAAATG-TCCGTTTTCCACTCGACAAAACGTTCTTCACTCCTG-AAA 178
| || || ||||||| ||| | | |||||||||||| |||||||| ||||| |||| ||
Sbjct 196 T-CAAAAGAAACACACATGTTTC-TTTTCCACTCGAGAAAACGTTATTCACCCCTGCGAA 253
Query 179 GAAAC-TCTTCGATCTTC-ACCGAAGTCTTTGAATCGACGGCTCAAAATCAACGGTTAC- 235
|||| || || | ||| ||| ||||| ||||||||||||||||||||| | ||| |
Sbjct 254 -AAACGTC-TCTTTGTTCAACC-AAGTCCTTGAATCGACGGCTCAAAATCTCCAGTT-CT 309
Query 236 TGACCAAGGCAATGCCTAAACCGGGATTCATATTTAGGCCGATTCATGAGTCTCATGTTC 295
|| | || | ||||||||||||||||||||||| || |||||||| ||||||| || |
Sbjct 310 TGGCAAAATCCATGCCTAAACCGGGATTCATATTCAGACCGATTCACCAGTCTCAAGTCC 369
Query 296 AAGCTTCTGTCATCTGTTCGAAGAAACTTGGAATACATTTTCGTGTTAGAAGCGGCGGTC 355
||||||| |||| ||||| |||||||| ||||| ||||||||||||||||| |||||||
Sbjct 370 AAGCTTCCATCATTTGTTCAAAGAAACTCGGAATTCATTTTCGTGTTAGAAGTGGCGGTC 429
Query 356 ACGATTACGAGGGCGTGTCTTATGTTTCACGGATCGAAAACCCGTTTGTATTAATCGATT 415
|||||| ||||| | ||||||||||||||||||| ||||| |||||| ||||| ||||
Sbjct 430 ACGATTTCGAGGCCTTGTCTTATGTTTCACGGATTGAAAAACCGTTTATATTACTCGACC 489
Query 416 TGTCGAAATTGAGACAAATCAATATTGATATTGAAGACAATAGTGCTTGGGTTCAAGCTG 475
|||| ||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||
Sbjct 490 TGTCAAAATTGAAACAAATCAATGTTGATATTGAATCCAATAGTGCTTGGGTTCAACCTG 549
Query 476 GTGCTACTATTGGTGAGCTTTACTACAGAATTGCAGAAAAGAGCAAGATTCATGGA-TTC 534
||||||| |||||||||||||||||||||||||||| ||||||||||| |||||| |||
Sbjct 550 GTGCTACGCTTGGTGAGCTTTACTACAGAATTGCAGAGAAGAGCAAGATCCATGGATTTC 609
Query 535 CCTGCAGGTGTGTACCCGAGTTTAGGCATAGGTGGGCATATAACAGGCGGTGCATACGGT 594
|| || ||| ||| | | ||| |||||||||||||| |||| |||||||||| |||||||
Sbjct 610 CC-GCGGGTTTGTGCACAAGTGTAGGCATAGGTGGGTATATGACAGGCGGTGGATACGGT 668
Query 595 TCCTTGATGAGGAAGTATGGTCTTGCTGCAGATAATGTTCTAGACGCAAAGATCGTTGAT 654
||||||||||||||||||||||||| | ||||||||||||||||| |||||| ||||||
Sbjct 669 ACCTTGATGAGGAAGTATGGTCTTGCGGGAGATAATGTTCTAGACGTAAAGATGGTTGAT 728
Query 655 GCTAATGGTAAATTACTCGACAGAGCCGCGATGGGTGAGGATCTATTTTGGGCGATTAGA 714
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 729 GCAAATGGTAAATTACTCGACAGAGCCGCGATGGGTGAGGACCTATTTTGGGCGATTAGA 788
Query 715 GGCGGTAGTGGAGGGAGTTTTGGGATAATTTTATCATGGAAGATCAAGCTTGTTCCTGTT 774
|| || |||||| |||||| |||||| || || ||||||||||||||||||||||||||
Sbjct 789 GGAGGCGGTGGAGCGAGTTTCGGGATAGTTCTAGCATGGAAGATCAAGCTTGTTCCTGTT 848
Query 775 CCTGAA-ACCATAACCGTCTTCACGGTCACCAAGACATT-GAAGCAAGATGCAAGTTTCA 832
||| || || | ||||||||||| |||||||| || || ||| ||||| ||||| || |
Sbjct 849 CCT-AAGACTGTTACCGTCTTCACTGTCACCAAAACGTTAGAA-CAAGACGCAAGATTGA 906
Query 833 AGATTCTTTTTAAGTGGCAACAAGTTGCGGACAAGCTTGTTGAAGAGCT-CTTCTTACGA 891
||| | ||| ||||||||||||| || | |||| || |||||||| | | | | |||
Sbjct 907 AGACTATTTCTAAGTGGCAACAAATTTCATCCAAGATTATTGAAGAGATACA-CATCCGA 965
Query 892 GTGTT-CTTCACTGTAGTTGGAAACAAAGCAAACAAGACAGTTTCGATGGCCTACATAGG 950
||| | || || | || |||||| | | ||||||||| || | ||| ||||| ||||
Sbjct 966 GTGGTACT-CAGAGCAGCTGGAAATGATGGAAACAAGACTGTGACAATGACCTACCTAGG 1024
Query 951 TCAGTTTCTTGGCGAGAAAGAAACCTTGATGGAGGTAATGGAGAAGGATTTTCCAGAACT 1010
|||||||||||||||||||| |||||| || |||| |||||||||| ||||||||||||
Sbjct 1025 TCAGTTTCTTGGCGAGAAAGGCACCTTGCTGAAGGTTATGGAGAAGGCTTTTCCAGAACT 1084
Query 1011 AGGGCTAACGCAGAAGGATTGTA-TAGAAATGAACTGGATCAAATCCATTATTTAC-A-G 1067
|||| |||| || |||||||||| | ||||||| |||||| || || ||| | | |
Sbjct 1085 AGGGTTAACTCAAAAGGATTGTACT-GAAATGAGCTGGATTGAAGCCGCCCTTTTCCATG 1143
Query 1068 CTCTGGATTCCCAACAAGCTCTCCTCCTCCCATTGAGATTTTGCTTCAAGCA-AAGTCTC 1126
| ||||| |||||| | | || |||| ||||| ||||||||||| || ||||| |
Sbjct 1144 GT--GGATTTCCAACAGG-T-TC-TCCT---ATTGAAATTTTGCTTCA-GCTCAAGTCGC 1194
Query 1127 CACTTGGAAAAGTTTACTTTAAAGCGAAA-TCGGATTTCGCTAAAGAACTTATTCCTGTT 1185
| || ||||||| |||||| ||||| || |||||||||| |||||||| |||||||||
Sbjct 1195 CTCTAGGAAAAGATTACTTCAAAGC-AACGTCGGATTTCGTTAAAGAACCTATTCCTGTG 1253
Query 1186 TTAGGGCTCAAAGGGATGCTCAAGAAG-TTGCTTGAAG-AAGACGCAGCATTAGTGATTT 1243
||||||||||||| || |||| ||| ||| |||||| || || || |||| ||| |
Sbjct 1254 ATAGGGCTCAAAGGAATATTCAA-AAGATTGATTGAAGGAA-ACACAACATTTCTGAACT 1311
Query 1244 GGACTCCTTACGGTGGAAAGATGAATAAAATCCCTGAATCCGAGATCCCGTTTCCGCATA 1303
|||||||||||||||| | |||| |||||||||||||| | |||||| ||||||||||
Sbjct 1312 GGACTCCTTACGGTGGTATGATGTCGAAAATCCCTGAATCTGCGATCCCATTTCCGCATA 1371
Query 1304 GAAACGGAACCAACTTCATGATTCAATACTACAG-GAGCTGG-TC-AGA-T-AGCGAGGA 1358
||||||||||| ||||| ||||| || ||| | || |||| | ||| | | | || |
Sbjct 1372 GAAACGGAACCCTCTTCAAGATTCTCTATTAC-GCGAACTGGCTAGAGAATGA-CAAG-A 1428
Query 1359 -ATCGA--ACAAACGCATCAAATGGATCAGAGAGTTGTACAGTTACATGACGCCTTACGT 1415
||||| | ||| ||||| ||||||| |||| | |||| ||||||| ||||||| ||
Sbjct 1429 CATCGAGTAGAAAA--ATCAACTGGATCAAAGAGATATACAATTACATGGCGCCTTATGT 1486
Query 1416 TTCAAGCAATCCAAGACAAGCATATGTGAACTACAGAGATCTAGACCTGGGACAGAACAA 1475
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1487 CTCAAGCAATCCAAGACAAGCATATGTGAACTACAGAGATCTAGACTTCGGACAGAACAA 1546
Query 1476 GAACAACTCAAAG-TCTAACTTCATAGAAGCTAAAAGATGGGGAGCTAAGTACTTCAAAG 1534
||||||| ||||| | ||||||||| |||||||||| |||||| |||||||||||||||
Sbjct 1547 GAACAACGCAAAGGT-TAACTTCATTGAAGCTAAAATCTGGGGACCTAAGTACTTCAAAG 1605
Query 1535 ACAATTTCAAAAGATTGGT-AAGGATTAAAACAAAGGTTGATCCAGATAACTTCTTTAGA 1593
|||||| | |||||||| ||| |||||||| |||||||||||||| |||||||| ||
Sbjct 1606 GCAATTTTGACAGATTGGTGAAG-ATTAAAACCAAGGTTGATCCAGAGAACTTCTTCAGG 1664
Query 1594 CACGAGCAGAGTATCCCAACTCTGCCC 1620
|||||||||||||||||| || |||||
Sbjct 1665 CACGAGCAGAGTATCCCACCTATGCCC 1691
> AT5G44400.1 | Symbols: | FAD-binding Berberine family protein
| chr5:17886194-17888480 REVERSE LENGTH=1930
Length=1930
Score = 1020 bits (552), Expect = 0.0
Identities = 1276/1616 (79%), Gaps = 88/1616 (5%)
Strand=Plus/Plus
Query 40 TCGTTTTTAGCCCTATATATTTCTTTCGTTACA--ATAACACCAGCTTCTTCA--A-CCT 94
||| |||||| ||| ||| |||| || |||| || |||||| |||||||| | |||
Sbjct 176 TCGATTTTAGTCCTCTATTTTTCACTC--TACACCATTACACCAACTTCTTCATTAGCCT 233
Query 95 CTCTACAAGATGATTTCATCAAATGTCTCCACAA-AAACACAAATGTCCGTTTTCCACTC 153
| || |||||| | |||||||| ||| |||| || ||||||| |||| || |||||
Sbjct 234 CCCTCCAAGATCAATTCATCAACTGTGTCCA-AAGAAACACACATGTTTACTTCCCACTT 292
Query 154 GACAAAACGTTCTTCACTCCTGA-AAGAAACTCT-TCGATCTTCA-CCGAAG-TCTTTGA 209
|| ||||||||||| ||||| | || ||| | | || || |||| || ||| || ||||
Sbjct 293 GAGAAAACGTTCTTTGCTCCT-ACAA-AAAATGTCTCTATGTTCAGCC-AAGTTC-TTGA 348
Query 210 ATCGACGGCTCAAAATCAACGGTTAC-TGACCAAGGCAATGCCTAAACCGGGATTCATAT 268
||||||||||||||||| ||||| | ||| || | ||||||||||||||||||||||
Sbjct 349 ATCGACGGCTCAAAATCTCCGGTT-CTTGAAAAAATCCATGCCTAAACCGGGATTCATAT 407
Query 269 TTAGGCCGATTCATGAGTCTCATGTTCAAGCTTCTGTCATCTGTTCGAAGAAACTTGGAA 328
| || || ||||| |||||||| || |||||||| |||| ||||| |||||||| |||
Sbjct 408 TCAGCCCTATTCACGAGTCTCACGTACAAGCTTCCATCATTTGTTCCAAGAAACTCCGAA 467
Query 329 TACATTTTCGTGTTAGAAGCGGCGGTCACGATTACGAGGGCGTGTCTTATGTTTCACGGA 388
| ||| | ||||| ||||||||||||||||| ||||| ||| |||||||||| || | ||
Sbjct 468 TGCATCTCCGTGTCAGAAGCGGCGGTCACGACTACGAAGGCTTGTCTTATGTCTCTCAGA 527
Query 389 TCGA-AAACCCGTTTGTATTAATCGATTTGTCGAAA-TTGAGACAAATCAATATTGATAT 446
|||| ||| |||||| |||| || ||| |||| ||| ||||||| |||| ||| ||||
Sbjct 528 TCGATAAA-CCGTTTATATTGATGGATCTGTC-AAAGATGAGACAGGTCAACATTAATAT 585
Query 447 TGAAGACAATAGTGCTTGGGTTCAAGCTGGTGCTACTATTGGTGAGCTTTACTACAGAAT 506
| ||||||| ||||||||||||||| ||||||| ||| ||||||| ||||| ||||| ||
Sbjct 586 TCAAGACAACAGTGCTTGGGTTCAATCTGGTGCCACTGTTGGTGAACTTTATTACAGGAT 645
Query 507 TGCAGAAAAGAGC-AAGATTCATGGATTCCCTGCAGGTGTGTACCCGAGTTTAGGCATAG 565
||| || |||||| ||| | ||||| ||||| || ||| ||| | |||| ||||||||||
Sbjct 646 TGCGGAGAAGAGCAAAG-TCCATGGGTTCCCGGCGGGTTTGTGCTCGAGCTTAGGCATAG 704
Query 566 GTGGGCATATAACAGGCGGTGCATACGGTTCCTTGATGAGGAAGTATGGTCTTGCTGCAG 625
| || || |||||||||||||| ||||||||| ||||| |||| |||||||| | |||||
Sbjct 705 GAGGACACATAACAGGCGGTGCGTACGGTTCCATGATGCGGAAATATGGTCTAGGTGCAG 764
Query 626 ATAATGTTCTAGACGCAAAGATCGTTGATGCTAATGGTAAATTACTCGACAGAGCCGCGA 685
| |||||||||||||||||||| |||||||| || |||||||||||||| ||||||||||
Sbjct 765 ACAATGTTCTAGACGCAAAGATTGTTGATGCCAACGGTAAATTACTCGATAGAGCCGCGA 824
Query 686 TGGGTGAGGAT-CTATTTTGGGCGATTAGAGGCGGTAG-TGGAGGGAGTTTTGGGATAAT 743
||||||||||| | ||||||||| |||||||| || | |||||||||||||||||||||
Sbjct 825 TGGGTGAGGATAC-ATTTTGGGCTATTAGAGGAGG-CGCTGGAGGGAGTTTTGGGATAAT 882
Query 744 TTTATCATGGAAGATCAAGCTTGTTCCTGTTCCTGAA-ACCATAACCGTCTTCACGGTCA 802
| || ||||||||||||||||||||||||||||| || ||| | |||||||| || ||||
Sbjct 883 TCTAGCATGGAAGATCAAGCTTGTTCCTGTTCCT-AAGACCGTGACCGTCTTTACCGTCA 941
Query 803 CCAAGACATTG-AAGCAAGATGCAAGTTTCAAGATTCTTTTTAAGTGGCAACA-AGTTGC 860
|||| || || || ||||| | || ||||||| | | ||||||||| | ||||||
Sbjct 942 CCAAAACGTTACAA-CAAGACGTGGGTAACAAGATTATCTCAAAGTGGCAA-AGAGTTGC 999
Query 861 GGACAAGCTTGTTGAAGAGCTCTTCTT-ACGAGTGTTCTTCA-CTGTAGTTGGAAACAAA 918
||||||||||||||||||||| ||| | | ||||| |||||| | |||| ||||| |
Sbjct 1000 GGACAAGCTTGTTGAAGAGCTATTCATCA-GAGTGCTCTTCAAC-GTAGCTGGAACCGGT 1057
Query 919 GCAAACAAGACAGTTTCGATGGCCTACATAGG-TCAGTTTCTTGGCGAGAAAGAAAC-CT 976
| |||||||| || ||| | | |||| | | || ||||||||||| ||||| ||| ||
Sbjct 1058 GGGAACAAGACTGTGACGACGTCGTACA-ATGCTCTGTTTCTTGGCGGGAAAGGAACGCT 1116
Query 977 TGATGGAGGTAATGGAGAAGGATTTTCCA-GAACTAGGGCTAACGCAGAAGGATTGTATA 1035
|||| | || ||| ||||| | ||||| || ||||||||||| || ||||||||
Sbjct 1117 -GATGAACGTTATGAAGAAG-AGTTTCCCCGAGCTAGGGCTAACATTTAAAGATTGTATC 1174
Query 1036 GAAATGAACTGGATCAAATCCATTATTTACAGCTCTGGATTCCCAACA-AGCTCTCCTCC 1094
||||||| |||| | |||||||| ||||| ||||||||||| || | | | ||| |
Sbjct 1175 GAAATGAGCTGGCTTGAATCCATTGCTTACATTTCTGGATTCCCGACCCA-CACGCCTAC 1233
Query 1095 TCCCATTGAGATTTTGCTTCAAGCAAAGTCTCCACTTGGAAAAGTTTA-CTTTAAAGCGA 1153
| || | |||||||||||| |||||||| || |||| | | ||| ||||| |
Sbjct 1234 TA--AT-G---TTTTGCTTCAAGGGAAGTCTCCG-TTCCCAAAGGTCAGCTTCAAAGCCA 1286
Query 1154 AATCGGATTTCGCTAAAGAACTT--ATTCCTGTTTTAGGGCT-CAAAGGGATGCT-CAAG 1209
|||||||||||| | || ||| ||||| | | ||||| ||| ||||| || ||||
Sbjct 1287 AATCGGATTTCG-TGAA-AACCCCGATTCCCGAATCCGGGCTTCAA-GGGAT-CTTCAAG 1342
Query 1210 AAGTTGCTTGAAGAAGACGCAGCATT-AGTGATTTGGACTCCTTACGGTGGAAAGATGAA 1268
||| | ||| ||||||| |||| | |||| |||| ||||||||| |||| ||||
Sbjct 1343 AAGCTACTTAAAGAAGATATTCCATTGA-TGATATGGAATCCTTACGGAGGAATGATGGC 1401
Query 1269 TAAAATCCCTGAATCCGAGATCCCGTTTCCGCATAGAAACGGAA-CCAACTTCATGATTC 1327
|||||||| |||||| | ||||| ||||||||| |||| ||| || ||||| | |||
Sbjct 1402 GAAAATCCCCGAATCCCAAATCCCTTTTCCGCATCGAAAAGGAGTCCT-CTTCAAGGTTC 1460
Query 1328 AATAC-TA-CAGGAGCTGG-TCAGATAGCGAG--GA-ATCGAACAAACGCATCAAATGGA 1381
| ||| || || || ||| | ||| || || || | ||| || || |||||| ||||
Sbjct 1461 AGTACGTAACA--AGTTGGCT-AGACAGTGACAAGAGACCGAGCAGACACATCAACTGGA 1517
Query 1382 TCAGAGAGT-TGTACAGTTACATGACGCCTTACGTTTCAAGCAATCCAAGACAAGCATAT 1440
||||||| | | || ||||||||||||||||| || ||||| || ||| || |||| ||
Sbjct 1518 TCAGAGA-TCTCTATAGTTACATGACGCCTTATGTCTCAAGTAACCCACGAGAAGCTTAC 1576
Query 1441 GTGAACTACAGAGATCTAGACCTGGGACAG-AACAAGAACA-AC-TCAAAGTC-TAACTT 1496
||||||||| | ||| ||||||||||| || |||| ||| | || | ||| | | | |
Sbjct 1577 GTGAACTACCGTGATTTAGACCTGGGA-AGGAACACGAA-AGACGTGAAAA-CATG-CAT 1632
Query 1497 CATAGAAGCTAAAAGA-TGGGGAGCTAAGTACTTCAAAGACAATTTCAAAAGATTGGTAA 1555
|| | ||||| || | ||||||||||| ||||||||| |||||||||| |||||| | |
Sbjct 1633 CAAACAAGCTCAA-GTCTGGGGAGCTAACTACTTCAAAAACAATTTCAACAGATTGATGA 1691
Query 1556 GGATTAAAACAAAGGTTGATCCAGATAACTTCTTTAGACACGAGCAGAGTATCCCA 1611
||||||| |||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct 1692 TGATTAAAGCAAAGGTTGATCCAGAGAACTTCTTTAGACACGAGCAGAGCATTCCA 1747
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80320872000
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5